RNA–Protein interactions for RNA: ENST00000524074.1

PFDN1-207, Transcript of prefoldin subunit 1, humanhuman

TSL 5 BASIC

Gene PFDN1, Length 395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-207ENST00000524074 FEM1AQ9BSK4 669 aa7.43□□□□□ -1.22
PFDN1-207ENST00000524074 MRIQ9BWK5 157 aa7.43□□□□□ -1.22
PFDN1-207ENST00000524074 RPRD1BQ9NQG5 326 aaKnown RBP7.43□□□□□ -1.22
PFDN1-207ENST00000524074 THEGQ9P2T0 379 aa7.43□□□□□ -1.22
PFDN1-207ENST00000524074 KIAA1257Q9ULG3 409 aa7.43□□□□□ -1.22
PFDN1-207ENST00000524074 EXOSC1Q9Y3B2 195 aaKnown RBP7.43□□□□□ -1.22
PFDN1-207ENST00000524074 ITSN1Q15811 1721 aa7.43□□□□□ -1.22
PFDN1-207ENST00000524074 TOPAZ1Q8N9V7 1692 aa7.42□□□□□ -1.22
PFDN1-207ENST00000524074 ARHGEF28Q8N1W1 1705 aaKnown RBP7.42□□□□□ -1.22
PFDN1-207ENST00000524074 GOLGA6L7A0A1B0GV03 622 aa7.42□□□□□ -1.22
PFDN1-207ENST00000524074 BTBD17A6NE02 478 aa7.42□□□□□ -1.22
PFDN1-207ENST00000524074 WRBO00258 174 aa7.42□□□□□ -1.22
PFDN1-207ENST00000524074 FGF17O60258 216 aa7.42□□□□□ -1.22
PFDN1-207ENST00000524074 CEACAM4O75871 244 aa7.42□□□□□ -1.22
PFDN1-207ENST00000524074 PDE5AO76074 875 aa7.42□□□□□ -1.22
PFDN1-207ENST00000524074 SORBS2O94875 1100 aaKnown RBP7.42□□□□□ -1.22
PFDN1-207ENST00000524074 TSPAN12O95859 305 aa7.42□□□□□ -1.22
PFDN1-207ENST00000524074 TROVE2P10155 538 aaKnown RBP eCLIP7.42□□□□□ -1.22
PFDN1-207ENST00000524074 SAA4P35542 130 aa7.42□□□□□ -1.22
PFDN1-207ENST00000524074 HPCAL1P37235 193 aa7.42□□□□□ -1.22
PFDN1-207ENST00000524074 SSR1P43307 286 aaKnown RBP7.42□□□□□ -1.22
PFDN1-207ENST00000524074 SYKP43405 635 aa7.42□□□□□ -1.22
PFDN1-207ENST00000524074 CRYBA2P53672 197 aa7.42□□□□□ -1.22
PFDN1-207ENST00000524074 CYBRD1Q53TN4 286 aa7.42□□□□□ -1.22
PFDN1-207ENST00000524074 GCNT7Q6ZNI0 430 aa7.42□□□□□ -1.22
PFDN1-207ENST00000524074 PSTKQ8IV42 348 aaKnown RBP7.42□□□□□ -1.22
PFDN1-207ENST00000524074 SLC22A8Q8TCC7 542 aa7.42□□□□□ -1.22
PFDN1-207ENST00000524074 NUDCD2Q8WVJ2 157 aa7.42□□□□□ -1.22
PFDN1-207ENST00000524074 PCNPQ8WW12 178 aaKnown RBP7.42□□□□□ -1.22
PFDN1-207ENST00000524074 STARD8Q92502 1023 aa7.42□□□□□ -1.22
PFDN1-207ENST00000524074 SLCO2A1Q92959 643 aa7.42□□□□□ -1.22
PFDN1-207ENST00000524074 SDSLQ96GA7 329 aa7.42□□□□□ -1.22
PFDN1-207ENST00000524074 ZFP14Q9HCL3 533 aa7.42□□□□□ -1.22
PFDN1-207ENST00000524074 ZNF71Q9NQZ8 489 aaPredicted RBP7.42□□□□□ -1.22
PFDN1-207ENST00000524074 TAS2R16Q9NYV7 291 aa7.42□□□□□ -1.22
PFDN1-207ENST00000524074 CYTH4Q9UIA0 394 aa7.42□□□□□ -1.22
PFDN1-207ENST00000524074 MRPS18CQ9Y3D5 142 aaKnown RBP7.42□□□□□ -1.22
PFDN1-207ENST00000524074 A0A1B0GVL5 298 aa7.41□□□□□ -1.22
PFDN1-207ENST00000524074 C15orf61A6NNL5 157 aa7.41□□□□□ -1.22
PFDN1-207ENST00000524074 NPIPB9F8W1W9 429 aa7.41□□□□□ -1.22
PFDN1-207ENST00000524074 PDLIM1O00151 329 aa7.41□□□□□ -1.22
PFDN1-207ENST00000524074 MAGEC1O60732 1142 aa7.41□□□□□ -1.22
PFDN1-207ENST00000524074 PRSS1P07477 247 aa7.41□□□□□ -1.22
PFDN1-207ENST00000524074 PABPC4LP0CB38 370 aaKnown RBP7.41□□□□□ -1.22
PFDN1-207ENST00000524074 POU2F1P14859 743 aa7.41□□□□□ -1.22
PFDN1-207ENST00000524074 NCK1P16333 377 aa7.41□□□□□ -1.22
PFDN1-207ENST00000524074 UCP1P25874 307 aa7.41□□□□□ -1.22
PFDN1-207ENST00000524074 CCT6AP40227 531 aaKnown RBP7.41□□□□□ -1.22
PFDN1-207ENST00000524074 CASP4P49662 377 aa7.41□□□□□ -1.22
PFDN1-207ENST00000524074 AP3M2P53677 418 aa7.41□□□□□ -1.22
PFDN1-207ENST00000524074 INHBEP58166 350 aa7.41□□□□□ -1.22
PFDN1-207ENST00000524074 ATL3Q6DD88 541 aa7.41□□□□□ -1.22
PFDN1-207ENST00000524074 FAM71F2Q6NXP2 309 aa7.41□□□□□ -1.22
PFDN1-207ENST00000524074 SPSB3Q6PJ21 355 aa7.41□□□□□ -1.22
PFDN1-207ENST00000524074 C19orf48Q6RUI8 117 aa7.41□□□□□ -1.22
PFDN1-207ENST00000524074 MOB2Q70IA6 237 aa7.41□□□□□ -1.22
PFDN1-207ENST00000524074 MOB3BQ86TA1 216 aa7.41□□□□□ -1.22
PFDN1-207ENST00000524074 ZNF575Q86XF7 245 aa7.41□□□□□ -1.22
PFDN1-207ENST00000524074 Q8N9G6 341 aaPredicted RBP7.41□□□□□ -1.22
PFDN1-207ENST00000524074 SPATA4Q8NEY3 305 aa7.41□□□□□ -1.22
PFDN1-207ENST00000524074 CCDC148Q8NFR7 591 aa7.41□□□□□ -1.22
PFDN1-207ENST00000524074 OR1F12Q8NHA8 337 aa7.41□□□□□ -1.22
PFDN1-207ENST00000524074 CITED1Q99966 193 aa7.41□□□□□ -1.22
PFDN1-207ENST00000524074 TSSK1BQ9BXA7 367 aa7.41□□□□□ -1.22
PFDN1-207ENST00000524074 CLSTN2Q9H4D0 955 aa7.41□□□□□ -1.22
PFDN1-207ENST00000524074 SEC14L4Q9UDX3 406 aa7.41□□□□□ -1.22
PFDN1-207ENST00000524074 ROCK2O75116 1388 aaKnown RBP7.41□□□□□ -1.22
PFDN1-207ENST00000524074 RGPD3A6NKT7 1758 aaPredicted RBP7.41□□□□□ -1.22
PFDN1-207ENST00000524074 RGPD4Q7Z3J3 1758 aa7.41□□□□□ -1.22
PFDN1-207ENST00000524074 ERICH4A6NGS2 130 aa7.4□□□□□ -1.22
PFDN1-207ENST00000524074 NPIPA7E9PJI5 369 aa7.4□□□□□ -1.22
PFDN1-207ENST00000524074 OR7A17O14581 309 aa7.4□□□□□ -1.22
PFDN1-207ENST00000524074 NBR2O15453 112 aa7.4□□□□□ -1.22
PFDN1-207ENST00000524074 LRATO95237 230 aa7.4□□□□□ -1.22
PFDN1-207ENST00000524074 PGK1P00558 417 aa7.4□□□□□ -1.22
PFDN1-207ENST00000524074 NPIPA8P0DM63 369 aa7.4□□□□□ -1.22
PFDN1-207ENST00000524074 ERVK-10P10266 1014 aa7.4□□□□□ -1.22
PFDN1-207ENST00000524074 CD1DP15813 335 aa7.4□□□□□ -1.22
PFDN1-207ENST00000524074 PGCP20142 388 aa7.4□□□□□ -1.22
PFDN1-207ENST00000524074 EPS15P42566 896 aa7.4□□□□□ -1.22
PFDN1-207ENST00000524074 SLC1A4P43007 532 aa7.4□□□□□ -1.22
PFDN1-207ENST00000524074 EMDP50402 254 aa7.4□□□□□ -1.22
PFDN1-207ENST00000524074 SLC7A2P52569 658 aa7.4□□□□□ -1.22
PFDN1-207ENST00000524074 MTF1Q14872 753 aa7.4□□□□□ -1.22
PFDN1-207ENST00000524074 SNAI3Q3KNW1 292 aa7.4□□□□□ -1.22
PFDN1-207ENST00000524074 PDZK1Q5T2W1 519 aa7.4□□□□□ -1.22
PFDN1-207ENST00000524074 OR4F3Q6IEY1 312 aa7.4□□□□□ -1.22
PFDN1-207ENST00000524074 DBX2Q6ZNG2 339 aa7.4□□□□□ -1.22
PFDN1-207ENST00000524074 SLC26A9Q7LBE3 791 aa7.4□□□□□ -1.22
PFDN1-207ENST00000524074 KCNG3Q8TAE7 436 aa7.4□□□□□ -1.22
PFDN1-207ENST00000524074 SCFD1Q8WVM8 642 aa7.4□□□□□ -1.22
PFDN1-207ENST00000524074 BIRC7Q96CA5 298 aa7.4□□□□□ -1.22
PFDN1-207ENST00000524074 C12orf66Q96MD2 445 aa7.4□□□□□ -1.22
PFDN1-207ENST00000524074 TNFRSF13CQ96RJ3 184 aa7.4□□□□□ -1.22
PFDN1-207ENST00000524074 COPS8Q99627 209 aa7.4□□□□□ -1.22
PFDN1-207ENST00000524074 LRRN3Q9H3W5 708 aa7.4□□□□□ -1.22
PFDN1-207ENST00000524074 NT5DC2Q9H857 520 aa7.4□□□□□ -1.22
PFDN1-207ENST00000524074 SLC2A8Q9NY64 477 aa7.4□□□□□ -1.22
PFDN1-207ENST00000524074 NPIPA1Q9UND3 350 aa7.4□□□□□ -1.22
PFDN1-207ENST00000524074 PPP1R3CQ9UQK1 317 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms