RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 TWIST2Q8WVJ9 160 aa16.82■□□□□ 0.28
PTP4A3-206ENST00000524028 PIGTQ969N2 578 aa16.82■□□□□ 0.28
PTP4A3-206ENST00000524028 FAM120BQ96EK7 910 aaKnown RBP16.82■□□□□ 0.28
PTP4A3-206ENST00000524028 GMPPAQ96IJ6 420 aaPredicted RBP16.82■□□□□ 0.28
PTP4A3-206ENST00000524028 TRMOQ9BU70 441 aa16.82■□□□□ 0.28
PTP4A3-206ENST00000524028 IQCGQ9H095 443 aaKnown RBP16.82■□□□□ 0.28
PTP4A3-206ENST00000524028 TMEM185BQ9H7F4 350 aa16.82■□□□□ 0.28
PTP4A3-206ENST00000524028 UBQLN4Q9NRR5 601 aa16.82■□□□□ 0.28
PTP4A3-206ENST00000524028 TMED5Q9Y3A6 229 aa16.82■□□□□ 0.28
PTP4A3-206ENST00000524028 EMC9Q9Y3B6 208 aa16.82■□□□□ 0.28
PTP4A3-206ENST00000524028 A0A0J9YW62 118 aa16.81■□□□□ 0.28
PTP4A3-206ENST00000524028 TNFSF11O14788 317 aa16.81■□□□□ 0.28
PTP4A3-206ENST00000524028 PIP5K1BO14986 540 aa16.81■□□□□ 0.28
PTP4A3-206ENST00000524028 ARHGEF9O43307 516 aa16.81■□□□□ 0.28
PTP4A3-206ENST00000524028 CHEK2O96017 543 aa16.81■□□□□ 0.28
PTP4A3-206ENST00000524028 ARL13AQ5H913 290 aaPredicted RBP16.81■□□□□ 0.28
PTP4A3-206ENST00000524028 ZCCHC12Q6PEW1 402 aa16.81■□□□□ 0.28
PTP4A3-206ENST00000524028 CLEC9AQ6UXN8 241 aa16.81■□□□□ 0.28
PTP4A3-206ENST00000524028 STAC2Q6ZMT1 411 aa16.81■□□□□ 0.28
PTP4A3-206ENST00000524028 DDIASQ8IXT1 998 aa16.81■□□□□ 0.28
PTP4A3-206ENST00000524028 COX18Q8N8Q8 333 aa16.81■□□□□ 0.28
PTP4A3-206ENST00000524028 OR7A2PQ8NGA2 310 aa16.81■□□□□ 0.28
PTP4A3-206ENST00000524028 OR2W6PQ8NHA6 318 aa16.81■□□□□ 0.28
PTP4A3-206ENST00000524028 OR2V1Q8NHB1 315 aa16.81■□□□□ 0.28
PTP4A3-206ENST00000524028 PPP1R14CQ8TAE6 165 aa16.81■□□□□ 0.28
PTP4A3-206ENST00000524028 ZBTB8AQ96BR9 441 aa16.81■□□□□ 0.28
PTP4A3-206ENST00000524028 MTERF3Q96E29 417 aa16.81■□□□□ 0.28
PTP4A3-206ENST00000524028 CCL19Q99731 98 aa16.81■□□□□ 0.28
PTP4A3-206ENST00000524028 MECRQ9BV79 373 aa16.81■□□□□ 0.28
PTP4A3-206ENST00000524028 ZNF395Q9H8N7 513 aaPredicted RBP16.81■□□□□ 0.28
PTP4A3-206ENST00000524028 STOML1Q9UBI4 398 aa16.81■□□□□ 0.28
PTP4A3-206ENST00000524028 ATP6V1HQ9UI12 483 aa16.81■□□□□ 0.28
PTP4A3-206ENST00000524028 MID2Q9UJV3 735 aa16.81■□□□□ 0.28
PTP4A3-206ENST00000524028 TRAF6Q9Y4K3 522 aa16.81■□□□□ 0.28
PTP4A3-206ENST00000524028 A0A1W2PQD3 144 aa16.8■□□□□ 0.28
PTP4A3-206ENST00000524028 KLF4O43474 513 aa16.8■□□□□ 0.28
PTP4A3-206ENST00000524028 EFNA2O43921 213 aa16.8■□□□□ 0.28
PTP4A3-206ENST00000524028 PLGP00747 810 aaPredicted RBP16.8■□□□□ 0.28
PTP4A3-206ENST00000524028 HMGN2P05204 90 aaKnown RBP16.8■□□□□ 0.28
PTP4A3-206ENST00000524028 LINGO3P0C6S8 592 aa16.8■□□□□ 0.28
PTP4A3-206ENST00000524028 FPR1P21462 350 aa16.8■□□□□ 0.28
PTP4A3-206ENST00000524028 SHC1P29353 583 aa16.8■□□□□ 0.28
PTP4A3-206ENST00000524028 LCN1P31025 176 aa16.8■□□□□ 0.28
PTP4A3-206ENST00000524028 ASMTP46597 345 aa16.8■□□□□ 0.28
PTP4A3-206ENST00000524028 PRIM2P49643 509 aa16.8■□□□□ 0.28
PTP4A3-206ENST00000524028 ZNF41P51814 821 aaPredicted RBP16.8■□□□□ 0.28
PTP4A3-206ENST00000524028 MLC1Q15049 377 aa16.8■□□□□ 0.28
PTP4A3-206ENST00000524028 BANPQ8N9N5 519 aa16.8■□□□□ 0.28
PTP4A3-206ENST00000524028 B4GALNT2Q8NHY0 566 aa16.8■□□□□ 0.28
PTP4A3-206ENST00000524028 JADE3Q92613 823 aa16.8■□□□□ 0.28
PTP4A3-206ENST00000524028 CDS1Q92903 461 aa16.8■□□□□ 0.28
PTP4A3-206ENST00000524028 CAVIN3Q969G5 261 aa16.8■□□□□ 0.28
PTP4A3-206ENST00000524028 BTBD2Q9BX70 525 aa16.8■□□□□ 0.28
PTP4A3-206ENST00000524028 ZCCHC3Q9NUD5 404 aaKnown RBP16.8■□□□□ 0.28
PTP4A3-206ENST00000524028 MKS1Q9NXB0 559 aa16.8■□□□□ 0.28
PTP4A3-206ENST00000524028 SLC17A7Q9P2U7 560 aa16.8■□□□□ 0.28
PTP4A3-206ENST00000524028 MCTS1Q9ULC4 181 aaKnown RBP16.8■□□□□ 0.28
PTP4A3-206ENST00000524028 NSD1Q96L73 2696 aaPredicted RBP16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 TLDC2A0PJX2 215 aa16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 SCDO00767 359 aa16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 SCAMP2O15127 329 aaKnown RBP16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 OIP5O43482 229 aa16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 NPHS1O60500 1241 aa16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 SYNGR4O95473 234 aa16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 LAMP1P11279 417 aa16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 NID1P14543 1247 aa16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 HPGDP15428 266 aa16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 ARRB2P32121 409 aa16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 SERPINB4P48594 390 aa16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 RNF144AP50876 292 aaPredicted RBP16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 CTBP2P56545 445 aa16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 POU6F2P78424 691 aaPredicted RBP16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 ZNF117Q03924 483 aa16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 LASP1Q14847 261 aaKnown RBP16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 HBMQ6B0K9 141 aa16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 LRIG3Q6UXM1 1119 aa16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 ESPNLQ6ZVH7 1005 aa16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 R3HCC1LQ7Z5L2 792 aaKnown RBP16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 MISPQ8IVT2 679 aa16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 AGR3Q8TD06 166 aa16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 OSTF1Q92882 214 aa16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 ARSGQ96EG1 525 aa16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 PERPQ96FX8 193 aa16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 APOPT1Q96IL0 206 aa16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 COX4I2Q96KJ9 171 aa16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 C3orf30Q96M34 536 aa16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 Q96MF0 132 aa16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 PIGUQ9H490 435 aa16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 HHATLQ9HCP6 504 aa16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 DUSP22Q9NRW4 184 aa16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 PAQR5Q9NXK6 330 aaPredicted RBP16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 GIN1Q9NXP7 522 aa16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 KCNE3Q9Y6H6 103 aa16.79■□□□□ 0.28
PTP4A3-206ENST00000524028 NPIPA5A0A0B4J1W7 369 aa16.78■□□□□ 0.28
PTP4A3-206ENST00000524028 NPIPA7E9PJI5 369 aa16.78■□□□□ 0.28
PTP4A3-206ENST00000524028 PEX11AO75192 247 aa16.78■□□□□ 0.28
PTP4A3-206ENST00000524028 LY6G6DO95868 133 aa16.78■□□□□ 0.28
PTP4A3-206ENST00000524028 NPIPA8P0DM63 369 aa16.78■□□□□ 0.28
PTP4A3-206ENST00000524028 FOXF1Q12946 379 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms