RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 ATP6V1HQ9UI12 483 aa7.98□□□□□ -1.13
CTNNA1-240ENST00000523912 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 A0A1W2PQD3 144 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 TMEM233B4DJY2 109 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 B4DXG7 233 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 H0YC42 278 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 ARHGEF9O43307 516 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 PEX11AO75192 247 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 SPAG7O75391 227 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 SKAP2O75563 359 aaPredicted RBP7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 IGKV1D-16P01601 117 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 PPP3CBP16298 524 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 PRPS1L1P21108 318 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 FPR1P21462 350 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 ELK4P28324 431 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 SOAT1P35610 550 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 KIR2DL2P43627 348 aaPredicted RBP7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 SUCLG1P53597 346 aaKnown RBP7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 TPD52P55327 224 aaPredicted RBP7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 SUMO3P55854 103 aaPredicted RBP7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 CLDN20P56880 219 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 RAC1P63000 192 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 XKR7Q5GH72 579 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 GTF2IRD2BQ6EKJ0 949 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 ESPNLQ6ZVH7 1005 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 FAM214BQ7L5A3 538 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 BTLAQ7Z6A9 289 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 MTERF4Q7Z6M4 381 aaKnown RBP7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 GALNT10Q86SR1 603 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 GTF2IRD2Q86UP8 949 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 EXOC3L1Q86VI1 746 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 KIRREL3Q8IZU9 778 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 SLC16A11Q8NCK7 471 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 OR6K3Q8NGY3 331 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 OR10D3Q8NH80 312 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 OR2W6PQ8NHA6 318 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 OR2V1Q8NHB1 315 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 SFXN5Q8TD22 340 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 ADAMTS15Q8TE58 950 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 TUBGCP3Q96CW5 907 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 FAM120BQ96EK7 910 aaKnown RBP7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 GIMAP5Q96F15 307 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 SH3YL1Q96HL8 342 aaPredicted RBP7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 GMPPAQ96IJ6 420 aaPredicted RBP7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 RNF145Q96MT1 663 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 C1orf50Q9BV19 199 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 MECRQ9BV79 373 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 ACTRT3Q9BYD9 372 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 RTN4RQ9BZR6 473 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 PLEKHF2Q9H8W4 249 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 MED17Q9NVC6 651 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 GIN1Q9NXP7 522 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 KLHL28Q9NXS3 571 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 SLC17A7Q9P2U7 560 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 ROS1P08922 2347 aa7.97□□□□□ -1.13
CTNNA1-240ENST00000523912 ARID1AO14497 2285 aa7.96□□□□□ -1.13
CTNNA1-240ENST00000523912 HRNRQ86YZ3 2850 aaPredicted RBP7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 SHISA8B8ZZ34 492 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 GTPBP1O00178 669 aaKnown RBP7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 CFLARO15519 480 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 CTIFO43310 598 aaKnown RBP7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 SMPD2O60906 423 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 SS18L1O75177 396 aaPredicted RBP7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 SNUPNO95149 360 aaKnown RBP7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 NUDT14O95848 222 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 AK1P00568 194 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 HMGN2P05204 90 aaKnown RBP7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 TUBBP07437 444 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 LAMP1P11279 417 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 EFNA1P20827 205 aaPredicted RBP7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 CRYGSP22914 178 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 MAP3K8P41279 467 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 CCT3P49368 545 aaKnown RBP7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 VSNL1P62760 191 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 ADAM8P78325 824 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 FAM27E3Q08E93 113 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 PTGR1Q14914 329 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 EXOC3L2Q2M3D2 409 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 TMEM44Q2T9K0 475 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 PLPPR5Q32ZL2 321 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 DCST2Q5T1A1 773 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 CCNJQ5T5M9 372 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 IL23RQ5VWK5 629 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 SHEQ5VZ18 495 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 HBMQ6B0K9 141 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 CDC73Q6P1J9 531 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 ZNF474Q6S9Z5 364 aaPredicted RBP7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 APOOLQ6UXV4 268 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 C20orf204Q6ZNR8 217 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 ZCCHC23Q6ZST2 131 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 GGNQ86UU5 652 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 P3H2Q8IVL5 708 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 ZNF614Q8N883 585 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 OR7A2PQ8NGA2 310 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 OR4C3Q8NH37 302 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 FAM110BQ8TC76 370 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 PHOSPHO1Q8TCT1 267 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 CDS1Q92903 461 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 PIGTQ969N2 578 aa7.96□□□□□ -1.14
CTNNA1-240ENST00000523912 PIK3IP1Q96FE7 263 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms