RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 RADILQ96JH8 1075 aa10.29□□□□□ -0.76
SDCBP-211ENST00000523441 KLHL15Q96M94 604 aa10.29□□□□□ -0.76
SDCBP-211ENST00000523441 PRR14Q9BWN1 585 aa10.29□□□□□ -0.76
SDCBP-211ENST00000523441 SLC35C2Q9NQQ7 365 aa10.29□□□□□ -0.76
SDCBP-211ENST00000523441 PAQR5Q9NXK6 330 aaPredicted RBP10.29□□□□□ -0.76
SDCBP-211ENST00000523441 KLHL13Q9P2N7 655 aa10.29□□□□□ -0.76
SDCBP-211ENST00000523441 PCTPQ9UKL6 214 aa10.29□□□□□ -0.76
SDCBP-211ENST00000523441 ATP23Q9Y6H3 246 aa10.29□□□□□ -0.76
SDCBP-211ENST00000523441 TGP01266 2768 aa10.28□□□□□ -0.76
SDCBP-211ENST00000523441 PLCE1Q9P212 2302 aa10.28□□□□□ -0.76
SDCBP-211ENST00000523441 A0A096LPK6 155 aa10.28□□□□□ -0.76
SDCBP-211ENST00000523441 A0A1W2PRB8 838 aa10.28□□□□□ -0.76
SDCBP-211ENST00000523441 ZNF814B7Z6K7 855 aa10.28□□□□□ -0.76
SDCBP-211ENST00000523441 TP73O15350 636 aa10.28□□□□□ -0.76
SDCBP-211ENST00000523441 RAD51DO75771 328 aa10.28□□□□□ -0.76
SDCBP-211ENST00000523441 NUDT14O95848 222 aa10.28□□□□□ -0.76
SDCBP-211ENST00000523441 IGKV1D-16P01601 117 aa10.28□□□□□ -0.76
SDCBP-211ENST00000523441 PABPC4LP0CB38 370 aaKnown RBP10.28□□□□□ -0.76
SDCBP-211ENST00000523441 ZNF17P17021 662 aa10.28□□□□□ -0.76
SDCBP-211ENST00000523441 EDNRAP25101 427 aa10.28□□□□□ -0.76
SDCBP-211ENST00000523441 MPIP34949 423 aa10.28□□□□□ -0.76
SDCBP-211ENST00000523441 THBS2P35442 1172 aa10.28□□□□□ -0.76
SDCBP-211ENST00000523441 RAC1P63000 192 aa10.28□□□□□ -0.76
SDCBP-211ENST00000523441 ACTG1P63261 375 aa10.28□□□□□ -0.76
SDCBP-211ENST00000523441 SLC18A2Q05940 514 aa10.28□□□□□ -0.76
SDCBP-211ENST00000523441 ILF2Q12905 390 aaKnown RBP10.28□□□□□ -0.76
SDCBP-211ENST00000523441 ZNHIT3Q15649 155 aaPredicted RBP10.28□□□□□ -0.76
SDCBP-211ENST00000523441 PRSS53Q2L4Q9 553 aa10.28□□□□□ -0.76
SDCBP-211ENST00000523441 CYP27C1Q4G0S4 372 aa10.28□□□□□ -0.76
SDCBP-211ENST00000523441 CPTPQ5TA50 214 aa10.28□□□□□ -0.76
SDCBP-211ENST00000523441 DNAJC14Q6Y2X3 702 aaPredicted RBP10.28□□□□□ -0.76
SDCBP-211ENST00000523441 Q6ZSR9 355 aa10.28□□□□□ -0.76
SDCBP-211ENST00000523441 FCRLAQ7L513 359 aa10.28□□□□□ -0.76
SDCBP-211ENST00000523441 RHEBL1Q8TAI7 183 aa10.28□□□□□ -0.76
SDCBP-211ENST00000523441 GPR151Q8TDV0 419 aa10.28□□□□□ -0.76
SDCBP-211ENST00000523441 RNF128Q8TEB7 428 aa10.28□□□□□ -0.76
SDCBP-211ENST00000523441 FBF1Q8TES7 1133 aa10.28□□□□□ -0.76
SDCBP-211ENST00000523441 DHRS9Q9BPW9 319 aa10.28□□□□□ -0.76
SDCBP-211ENST00000523441 PIMREGQ9BSJ6 248 aa10.28□□□□□ -0.76
SDCBP-211ENST00000523441 L2HGDHQ9H9P8 463 aa10.28□□□□□ -0.76
SDCBP-211ENST00000523441 MED17Q9NVC6 651 aa10.28□□□□□ -0.76
SDCBP-211ENST00000523441 DDX18Q9NVP1 670 aaKnown RBP10.28□□□□□ -0.76
SDCBP-211ENST00000523441 MRTO4Q9UKD2 239 aaKnown RBP10.28□□□□□ -0.76
SDCBP-211ENST00000523441 SNX12Q9UMY4 172 aa10.28□□□□□ -0.76
SDCBP-211ENST00000523441 IGHV4-61A0A0C4DH41 118 aa10.27□□□□□ -0.77
SDCBP-211ENST00000523441 ADAMDEC1O15204 470 aa10.27□□□□□ -0.77
SDCBP-211ENST00000523441 PLOD3O60568 738 aa10.27□□□□□ -0.77
SDCBP-211ENST00000523441 PRKD3O94806 890 aa10.27□□□□□ -0.77
SDCBP-211ENST00000523441 OR4F21O95013 312 aa10.27□□□□□ -0.77
SDCBP-211ENST00000523441 KLHL2O95198 593 aa10.27□□□□□ -0.77
SDCBP-211ENST00000523441 KCNH1O95259 989 aa10.27□□□□□ -0.77
SDCBP-211ENST00000523441 YES1P07947 543 aa10.27□□□□□ -0.77
SDCBP-211ENST00000523441 GGT1P19440 569 aa10.27□□□□□ -0.77
SDCBP-211ENST00000523441 ENPP1P22413 925 aa10.27□□□□□ -0.77
SDCBP-211ENST00000523441 PSMD4P55036 377 aaKnown RBP10.27□□□□□ -0.77
SDCBP-211ENST00000523441 FOXF1Q12946 379 aa10.27□□□□□ -0.77
SDCBP-211ENST00000523441 RNPS1Q15287 305 aaKnown RBP10.27□□□□□ -0.77
SDCBP-211ENST00000523441 PLPPR5Q32ZL2 321 aa10.27□□□□□ -0.77
SDCBP-211ENST00000523441 TMEM176BQ3YBM2 270 aaPredicted RBP10.27□□□□□ -0.77
SDCBP-211ENST00000523441 FAM174BQ3ZCQ3 159 aa10.27□□□□□ -0.77
SDCBP-211ENST00000523441 LETMD1Q6P1Q0 360 aa10.27□□□□□ -0.77
SDCBP-211ENST00000523441 RINLQ6ZS11 566 aa10.27□□□□□ -0.77
SDCBP-211ENST00000523441 MEX3DQ86XN8 651 aaKnown RBP10.27□□□□□ -0.77
SDCBP-211ENST00000523441 ZNF100Q8IYN0 542 aa10.27□□□□□ -0.77
SDCBP-211ENST00000523441 PLD6Q8N2A8 252 aaKnown RBP10.27□□□□□ -0.77
SDCBP-211ENST00000523441 UBE2J2Q8N2K1 259 aa10.27□□□□□ -0.77
SDCBP-211ENST00000523441 GTPBP8Q8N3Z3 284 aaPredicted RBP10.27□□□□□ -0.77
SDCBP-211ENST00000523441 POC1BQ8TC44 478 aa10.27□□□□□ -0.77
SDCBP-211ENST00000523441 C16orf78Q8WTQ4 265 aa10.27□□□□□ -0.77
SDCBP-211ENST00000523441 PROX1Q92786 737 aa10.27□□□□□ -0.77
SDCBP-211ENST00000523441 FBXO17Q96EF6 278 aa10.27□□□□□ -0.77
SDCBP-211ENST00000523441 OTUB1Q96FW1 271 aaPredicted RBP10.27□□□□□ -0.77
SDCBP-211ENST00000523441 FOXN4Q96NZ1 517 aa10.27□□□□□ -0.77
SDCBP-211ENST00000523441 SOX7Q9BT81 388 aa10.27□□□□□ -0.77
SDCBP-211ENST00000523441 CXorf36Q9H7Y0 433 aa10.27□□□□□ -0.77
SDCBP-211ENST00000523441 ANKZF1Q9H8Y5 726 aa10.27□□□□□ -0.77
SDCBP-211ENST00000523441 TIGARQ9NQ88 270 aa10.27□□□□□ -0.77
SDCBP-211ENST00000523441 NMRK1Q9NWW6 199 aa10.27□□□□□ -0.77
SDCBP-211ENST00000523441 VPS29Q9UBQ0 182 aa10.27□□□□□ -0.77
SDCBP-211ENST00000523441 SNX6Q9UNH7 406 aa10.27□□□□□ -0.77
SDCBP-211ENST00000523441 TRAF6Q9Y4K3 522 aa10.27□□□□□ -0.77
SDCBP-211ENST00000523441 A0A087WZY1 265 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 A0A1W2PNR3 127 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 CIB4A0PJX0 185 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 LRP5LA4QPB2 252 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 CCT8L1PA6NM43 557 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 UPK1AO00322 258 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 SMIM24O75264 130 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 OXSR1O95747 527 aaPredicted RBP10.26□□□□□ -0.77
SDCBP-211ENST00000523441 HPGDP15428 266 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 EGR1P18146 543 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 IGHV1-2P23083 117 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 TYK2P29597 1187 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 PDLIM4P50479 330 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 EFNA4P52798 201 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 PRKAG1P54619 331 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 TRA2BP62995 288 aaKnown RBP10.26□□□□□ -0.77
SDCBP-211ENST00000523441 PSPHP78330 225 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 RAE1P78406 368 aaKnown RBP10.26□□□□□ -0.77
SDCBP-211ENST00000523441 PRR5P85299 388 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms