RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 UBA52P62987 128 aaKnown RBP12.12□□□□□ -0.47
NKX3-1-202ENST00000523261 MLC1Q15049 377 aa12.12□□□□□ -0.47
NKX3-1-202ENST00000523261 TRIP10Q15642 601 aa12.12□□□□□ -0.47
NKX3-1-202ENST00000523261 PLPPR5Q32ZL2 321 aa12.12□□□□□ -0.47
NKX3-1-202ENST00000523261 CYP27C1Q4G0S4 372 aa12.12□□□□□ -0.47
NKX3-1-202ENST00000523261 FBLN7Q53RD9 439 aa12.12□□□□□ -0.47
NKX3-1-202ENST00000523261 SH2D4BQ5SQS7 431 aa12.12□□□□□ -0.47
NKX3-1-202ENST00000523261 RNASEH2BQ5TBB1 312 aaKnown RBP12.12□□□□□ -0.47
NKX3-1-202ENST00000523261 TRABD2AQ86V40 505 aa12.12□□□□□ -0.47
NKX3-1-202ENST00000523261 CCDC116Q8IYX3 515 aa12.12□□□□□ -0.47
NKX3-1-202ENST00000523261 LILRA2Q8N149 483 aa12.12□□□□□ -0.47
NKX3-1-202ENST00000523261 TEX9Q8N6V9 391 aa12.12□□□□□ -0.47
NKX3-1-202ENST00000523261 OR9A2Q8NGT5 310 aa12.12□□□□□ -0.47
NKX3-1-202ENST00000523261 TMEM186Q96B77 213 aa12.12□□□□□ -0.47
NKX3-1-202ENST00000523261 CFAP36Q96G28 342 aa12.12□□□□□ -0.47
NKX3-1-202ENST00000523261 PKP2Q99959 881 aa12.12□□□□□ -0.47
NKX3-1-202ENST00000523261 MCMBPQ9BTE3 642 aa12.12□□□□□ -0.47
NKX3-1-202ENST00000523261 SUCNR1Q9BXA5 334 aa12.12□□□□□ -0.47
NKX3-1-202ENST00000523261 C1QTNF6Q9BXI9 259 aa12.12□□□□□ -0.47
NKX3-1-202ENST00000523261 MRPL1Q9BYD6 325 aaKnown RBP12.12□□□□□ -0.47
NKX3-1-202ENST00000523261 TBL1XR1Q9BZK7 514 aa12.12□□□□□ -0.47
NKX3-1-202ENST00000523261 CDC42EP4Q9H3Q1 356 aaKnown RBP12.12□□□□□ -0.47
NKX3-1-202ENST00000523261 TIGARQ9NQ88 270 aa12.12□□□□□ -0.47
NKX3-1-202ENST00000523261 MED17Q9NVC6 651 aa12.12□□□□□ -0.47
NKX3-1-202ENST00000523261 NUDT4Q9NZJ9 180 aa12.12□□□□□ -0.47
NKX3-1-202ENST00000523261 NTMQ9P121 344 aa12.12□□□□□ -0.47
NKX3-1-202ENST00000523261 TRAF6Q9Y4K3 522 aa12.12□□□□□ -0.47
NKX3-1-202ENST00000523261 PTGDR2Q9Y5Y4 395 aa12.12□□□□□ -0.47
NKX3-1-202ENST00000523261 ZNF780BQ9Y6R6 833 aa12.12□□□□□ -0.47
NKX3-1-202ENST00000523261 ATP6V1G2-DDX39BF2Z307 99 aa12.11□□□□□ -0.47
NKX3-1-202ENST00000523261 PHGDHO43175 533 aaKnown RBP12.11□□□□□ -0.47
NKX3-1-202ENST00000523261 RGS14O43566 566 aa12.11□□□□□ -0.47
NKX3-1-202ENST00000523261 GUCY1B2O75343 617 aa12.11□□□□□ -0.47
NKX3-1-202ENST00000523261 ENPP1P22413 925 aa12.11□□□□□ -0.47
NKX3-1-202ENST00000523261 PIK3CGP48736 1102 aa12.11□□□□□ -0.47
NKX3-1-202ENST00000523261 PRR5P85299 388 aa12.11□□□□□ -0.47
NKX3-1-202ENST00000523261 DECR1Q16698 335 aa12.11□□□□□ -0.47
NKX3-1-202ENST00000523261 TCHHL1Q5QJ38 904 aaPredicted RBP12.11□□□□□ -0.47
NKX3-1-202ENST00000523261 STEAP4Q687X5 459 aa12.11□□□□□ -0.47
NKX3-1-202ENST00000523261 C1orf229Q6ZS94 237 aaPredicted RBP12.11□□□□□ -0.47
NKX3-1-202ENST00000523261 PAGE2Q7Z2X7 111 aa12.11□□□□□ -0.47
NKX3-1-202ENST00000523261 SLC43A2Q8N370 569 aa12.11□□□□□ -0.47
NKX3-1-202ENST00000523261 TRPC4APQ8TEL6 797 aa12.11□□□□□ -0.47
NKX3-1-202ENST00000523261 TM4SF18Q96CE8 201 aa12.11□□□□□ -0.47
NKX3-1-202ENST00000523261 PSD2Q9BQI7 771 aa12.11□□□□□ -0.47
NKX3-1-202ENST00000523261 DESI2Q9BSY9 194 aa12.11□□□□□ -0.47
NKX3-1-202ENST00000523261 RHOJQ9H4E5 214 aa12.11□□□□□ -0.47
NKX3-1-202ENST00000523261 UNKLQ9H9P5 680 aaKnown RBP12.11□□□□□ -0.47
NKX3-1-202ENST00000523261 CAB39LQ9H9S4 337 aa12.11□□□□□ -0.47
NKX3-1-202ENST00000523261 KLHL9Q9P2J3 617 aa12.11□□□□□ -0.47
NKX3-1-202ENST00000523261 GRIP1Q9Y3R0 1128 aa12.11□□□□□ -0.47
NKX3-1-202ENST00000523261 IGHV3-15A0A0B4J1V0 119 aa12.1□□□□□ -0.47
NKX3-1-202ENST00000523261 GOLGA6L10A0A0M3HER8 536 aa12.1□□□□□ -0.47
NKX3-1-202ENST00000523261 C9JVG2 144 aa12.1□□□□□ -0.47
NKX3-1-202ENST00000523261 PLOD3O60568 738 aa12.1□□□□□ -0.47
NKX3-1-202ENST00000523261 UGDHO60701 494 aa12.1□□□□□ -0.47
NKX3-1-202ENST00000523261 DAOP14920 347 aa12.1□□□□□ -0.47
NKX3-1-202ENST00000523261 SLC12A2P55011 1212 aa12.1□□□□□ -0.47
NKX3-1-202ENST00000523261 POU4F1Q01851 419 aa12.1□□□□□ -0.47
NKX3-1-202ENST00000523261 ZNF155Q12901 538 aaPredicted RBP12.1□□□□□ -0.47
NKX3-1-202ENST00000523261 RIN1Q13671 783 aa12.1□□□□□ -0.47
NKX3-1-202ENST00000523261 HP1BP3Q5SSJ5 553 aaPredicted RBP12.1□□□□□ -0.47
NKX3-1-202ENST00000523261 METTL4Q8N3J2 472 aa12.1□□□□□ -0.47
NKX3-1-202ENST00000523261 CDYL2Q8N8U2 506 aa12.1□□□□□ -0.47
NKX3-1-202ENST00000523261 OR7G2Q8NG99 324 aa12.1□□□□□ -0.47
NKX3-1-202ENST00000523261 ZNF775Q96BV0 537 aaPredicted RBP12.1□□□□□ -0.47
NKX3-1-202ENST00000523261 SLC6A7Q99884 636 aa12.1□□□□□ -0.47
NKX3-1-202ENST00000523261 KLHDC3Q9BQ90 382 aa12.1□□□□□ -0.47
NKX3-1-202ENST00000523261 COQ10BQ9H8M1 238 aa12.1□□□□□ -0.47
NKX3-1-202ENST00000523261 ANKZF1Q9H8Y5 726 aa12.1□□□□□ -0.47
NKX3-1-202ENST00000523261 TAS2R9Q9NYW1 312 aa12.1□□□□□ -0.47
NKX3-1-202ENST00000523261 DMGDHQ9UI17 866 aaKnown RBP12.1□□□□□ -0.47
NKX3-1-202ENST00000523261 UTS2RQ9UKP6 389 aa12.1□□□□□ -0.47
NKX3-1-202ENST00000523261 RNF11Q9Y3C5 154 aa12.1□□□□□ -0.47
NKX3-1-202ENST00000523261 CIB4A0PJX0 185 aa12.09□□□□□ -0.47
NKX3-1-202ENST00000523261 UBXN8O00124 270 aa12.09□□□□□ -0.47
NKX3-1-202ENST00000523261 EFNA2O43921 213 aa12.09□□□□□ -0.47
NKX3-1-202ENST00000523261 KERAO60938 352 aa12.09□□□□□ -0.47
NKX3-1-202ENST00000523261 UTS2O95399 124 aa12.09□□□□□ -0.47
NKX3-1-202ENST00000523261 ELK3P41970 407 aa12.09□□□□□ -0.47
NKX3-1-202ENST00000523261 ALDH9A1P49189 494 aa12.09□□□□□ -0.47
NKX3-1-202ENST00000523261 IDH3GP51553 393 aaPredicted RBP12.09□□□□□ -0.47
NKX3-1-202ENST00000523261 MGAT5Q09328 741 aa12.09□□□□□ -0.47
NKX3-1-202ENST00000523261 FRG1Q14331 258 aaKnown RBP12.09□□□□□ -0.47
NKX3-1-202ENST00000523261 COMMD6Q7Z4G1 85 aa12.09□□□□□ -0.47
NKX3-1-202ENST00000523261 ZNF786Q8N393 782 aa12.09□□□□□ -0.47
NKX3-1-202ENST00000523261 L3MBTL4Q8NA19 623 aa12.09□□□□□ -0.47
NKX3-1-202ENST00000523261 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.09□□□□□ -0.47
NKX3-1-202ENST00000523261 ACTRT2Q8TDY3 377 aa12.09□□□□□ -0.47
NKX3-1-202ENST00000523261 ZNF75CPQ92670 426 aaPredicted RBP12.09□□□□□ -0.47
NKX3-1-202ENST00000523261 UBXN10Q96LJ8 280 aa12.09□□□□□ -0.47
NKX3-1-202ENST00000523261 ZNF300Q96RE9 604 aaPredicted RBP12.09□□□□□ -0.47
NKX3-1-202ENST00000523261 ATOH8Q96SQ7 321 aa12.09□□□□□ -0.47
NKX3-1-202ENST00000523261 ALG9Q9H6U8 611 aa12.09□□□□□ -0.47
NKX3-1-202ENST00000523261 PFDN4Q9NQP4 134 aa12.09□□□□□ -0.47
NKX3-1-202ENST00000523261 AHSPQ9NZD4 102 aa12.09□□□□□ -0.47
NKX3-1-202ENST00000523261 CHMP2BQ9UQN3 213 aa12.09□□□□□ -0.47
NKX3-1-202ENST00000523261 MTO1Q9Y2Z2 717 aaKnown RBP12.09□□□□□ -0.47
NKX3-1-202ENST00000523261 ANGPTL3Q9Y5C1 460 aa12.09□□□□□ -0.47
NKX3-1-202ENST00000523261 SUPT3HB4E1H0 165 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms