RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 XAGE5Q8WWM1 108 aa16.15■□□□□ 0.18
CLK4-211ENST00000522556 TRIB1Q96RU8 372 aa16.15■□□□□ 0.18
CLK4-211ENST00000522556 ZNF350Q9GZX5 532 aa16.15■□□□□ 0.18
CLK4-211ENST00000522556 NPHS2Q9NP85 383 aa16.15■□□□□ 0.18
CLK4-211ENST00000522556 DCTN4Q9UJW0 460 aa16.15■□□□□ 0.18
CLK4-211ENST00000522556 ZNF337Q9Y3M9 751 aa16.15■□□□□ 0.18
CLK4-211ENST00000522556 PCDHGB3Q9Y5G1 929 aa16.15■□□□□ 0.18
CLK4-211ENST00000522556 KLF2Q9Y5W3 355 aaPredicted RBP16.15■□□□□ 0.18
CLK4-211ENST00000522556 A0A1W2PQD3 144 aa16.14■□□□□ 0.17
CLK4-211ENST00000522556 H0Y3Z8 333 aa16.14■□□□□ 0.17
CLK4-211ENST00000522556 SCDO00767 359 aa16.14■□□□□ 0.17
CLK4-211ENST00000522556 CHRNB4P30926 498 aa16.14■□□□□ 0.17
CLK4-211ENST00000522556 KHKP50053 298 aa16.14■□□□□ 0.17
CLK4-211ENST00000522556 SUCLG1P53597 346 aaKnown RBP16.14■□□□□ 0.17
CLK4-211ENST00000522556 MVDP53602 400 aa16.14■□□□□ 0.17
CLK4-211ENST00000522556 TFF3Q07654 80 aa16.14■□□□□ 0.17
CLK4-211ENST00000522556 MAPK14Q16539 360 aa16.14■□□□□ 0.17
CLK4-211ENST00000522556 TMEM44Q2T9K0 475 aa16.14■□□□□ 0.17
CLK4-211ENST00000522556 ARHGAP11BQ3KRB8 267 aa16.14■□□□□ 0.17
CLK4-211ENST00000522556 PDZK1Q5T2W1 519 aa16.14■□□□□ 0.17
CLK4-211ENST00000522556 TYW3Q6IPR3 259 aaKnown RBP16.14■□□□□ 0.17
CLK4-211ENST00000522556 CGB2Q6NT52 195 aa16.14■□□□□ 0.17
CLK4-211ENST00000522556 UBQLNLQ8IYU4 475 aa16.14■□□□□ 0.17
CLK4-211ENST00000522556 ANKFN1Q8N957 763 aa16.14■□□□□ 0.17
CLK4-211ENST00000522556 C9orf106Q8NAJ2 232 aa16.14■□□□□ 0.17
CLK4-211ENST00000522556 PHOSPHO1Q8TCT1 267 aa16.14■□□□□ 0.17
CLK4-211ENST00000522556 ZG16BQ96DA0 208 aa16.14■□□□□ 0.17
CLK4-211ENST00000522556 CCDC28BQ9BUN5 200 aa16.14■□□□□ 0.17
CLK4-211ENST00000522556 QRSL1Q9H0R6 528 aaKnown RBP16.14■□□□□ 0.17
CLK4-211ENST00000522556 SLC52A3Q9NQ40 469 aa16.14■□□□□ 0.17
CLK4-211ENST00000522556 NPDC1Q9NQX5 325 aaPredicted RBP16.14■□□□□ 0.17
CLK4-211ENST00000522556 COQ3Q9NZJ6 369 aa16.14■□□□□ 0.17
CLK4-211ENST00000522556 CARD8Q9Y2G2 431 aa16.14■□□□□ 0.17
CLK4-211ENST00000522556 MRPS18CQ9Y3D5 142 aaKnown RBP16.14■□□□□ 0.17
CLK4-211ENST00000522556 CRYBG3Q68DQ2 2970 aa16.14■□□□□ 0.17
CLK4-211ENST00000522556 MED12LQ86YW9 2145 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 FAM234BA2RU67 622 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 CLCA1A8K7I4 914 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 AHRRA9YTQ3 701 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 H3BML4 177 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 NR5A2O00482 541 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 RFXANKO14593 260 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 HCRTR2O43614 444 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 EPPINO95925 133 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 IL6P05231 212 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 PRF1P14222 555 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 CPN1P15169 458 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 HPGDP15428 266 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 HOXB9P17482 250 aaPredicted RBP16.13■□□□□ 0.17
CLK4-211ENST00000522556 CAPN3P20807 821 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 IL11P20809 199 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 LCN1P31025 176 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 MRPL19P49406 292 aaKnown RBP16.13■□□□□ 0.17
CLK4-211ENST00000522556 ATP12AP54707 1039 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 CLDN20P56880 219 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 PLAURQ03405 335 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 GANABQ14697 944 aaKnown RBP16.13■□□□□ 0.17
CLK4-211ENST00000522556 MAPK11Q15759 364 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 TOMM34Q15785 309 aaPredicted RBP16.13■□□□□ 0.17
CLK4-211ENST00000522556 PLPPR5Q32ZL2 321 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 NSUN5P2Q63ZY6 315 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 POMZP3Q6PJE2 187 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 FRRS1Q6ZNA5 592 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 C16orf62Q7Z3J2 963 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 RELL2Q8NC24 303 aaPredicted RBP16.13■□□□□ 0.17
CLK4-211ENST00000522556 POC1BQ8TC44 478 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 ZFP90Q8TF47 636 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 SMPDL3BQ92485 455 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 ROPN1LQ96C74 230 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 ACBD3Q9H3P7 528 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 PTGES2Q9H7Z7 377 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 MED17Q9NVC6 651 aa16.13■□□□□ 0.17
CLK4-211ENST00000522556 UNC79Q9P2D8 2635 aa16.12■□□□□ 0.17
CLK4-211ENST00000522556 CLDN24A6NM45 220 aa16.12■□□□□ 0.17
CLK4-211ENST00000522556 SEC14L5O43304 696 aa16.12■□□□□ 0.17
CLK4-211ENST00000522556 KIAA0513O60268 411 aa16.12■□□□□ 0.17
CLK4-211ENST00000522556 UGT2B17O75795 530 aa16.12■□□□□ 0.17
CLK4-211ENST00000522556 OPN1LWP04000 364 aa16.12■□□□□ 0.17
CLK4-211ENST00000522556 CHRM4P08173 479 aa16.12■□□□□ 0.17
CLK4-211ENST00000522556 POU3F2P20265 443 aaPredicted RBP16.12■□□□□ 0.17
CLK4-211ENST00000522556 CHMP24386 653 aa16.12■□□□□ 0.17
CLK4-211ENST00000522556 CEACAM8P31997 349 aaPredicted RBP16.12■□□□□ 0.17
CLK4-211ENST00000522556 AGFG1P52594 562 aaKnown RBP16.12■□□□□ 0.17
CLK4-211ENST00000522556 ZNF136P52737 540 aa16.12■□□□□ 0.17
CLK4-211ENST00000522556 GUCY1A3Q02108 690 aa16.12■□□□□ 0.17
CLK4-211ENST00000522556 RCAN2Q14206 197 aa16.12■□□□□ 0.17
CLK4-211ENST00000522556 SYPL1Q16563 259 aa16.12■□□□□ 0.17
CLK4-211ENST00000522556 RIPPLY2Q5TAB7 128 aa16.12■□□□□ 0.17
CLK4-211ENST00000522556 AAGABQ6PD74 315 aa16.12■□□□□ 0.17
CLK4-211ENST00000522556 ENPP6Q6UWR7 440 aa16.12■□□□□ 0.17
CLK4-211ENST00000522556 ADGRE4PQ86SQ3 457 aa16.12■□□□□ 0.17
CLK4-211ENST00000522556 PM20D2Q8IYS1 436 aa16.12■□□□□ 0.17
CLK4-211ENST00000522556 LILRB4Q8NHJ6 448 aa16.12■□□□□ 0.17
CLK4-211ENST00000522556 B4GALNT2Q8NHY0 566 aa16.12■□□□□ 0.17
CLK4-211ENST00000522556 GTF2H4Q92759 462 aa16.12■□□□□ 0.17
CLK4-211ENST00000522556 PAIP1Q9H074 479 aaKnown RBP16.12■□□□□ 0.17
CLK4-211ENST00000522556 ZNF385DQ9H6B1 395 aa16.12■□□□□ 0.17
CLK4-211ENST00000522556 RUBCNLQ9H714 662 aa16.12■□□□□ 0.17
CLK4-211ENST00000522556 CCDC167Q9P0B6 97 aa16.12■□□□□ 0.17
CLK4-211ENST00000522556 SLAMF8Q9P0V8 285 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms