RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 PIGXQ8TBF5 258 aa6.22□□□□□ -1.41
CTNNA1-228ENST00000521640 TBC1D15Q8TC07 691 aa6.22□□□□□ -1.41
CTNNA1-228ENST00000521640 PATE1Q8WXA2 126 aa6.22□□□□□ -1.41
CTNNA1-228ENST00000521640 S100ZQ8WXG8 99 aa6.22□□□□□ -1.41
CTNNA1-228ENST00000521640 SGCDQ92629 289 aa6.22□□□□□ -1.41
CTNNA1-228ENST00000521640 KAT2AQ92830 837 aa6.22□□□□□ -1.41
CTNNA1-228ENST00000521640 OSTF1Q92882 214 aa6.22□□□□□ -1.41
CTNNA1-228ENST00000521640 CDS1Q92903 461 aa6.22□□□□□ -1.41
CTNNA1-228ENST00000521640 FGF11Q92914 225 aa6.22□□□□□ -1.41
CTNNA1-228ENST00000521640 ANKRD9Q96BM1 317 aaPredicted RBP6.22□□□□□ -1.41
CTNNA1-228ENST00000521640 ZDHHC12Q96GR4 267 aa6.22□□□□□ -1.41
CTNNA1-228ENST00000521640 CCNL2Q96S94 520 aaPredicted RBP6.22□□□□□ -1.41
CTNNA1-228ENST00000521640 DUSP15Q9H1R2 295 aaPredicted RBP6.22□□□□□ -1.41
CTNNA1-228ENST00000521640 RASSF1Q9NS23 344 aa6.22□□□□□ -1.41
CTNNA1-228ENST00000521640 NLGN3Q9NZ94 848 aa6.22□□□□□ -1.41
CTNNA1-228ENST00000521640 SLC5A6Q9Y289 635 aa6.22□□□□□ -1.41
CTNNA1-228ENST00000521640 TMEM5Q9Y2B1 443 aa6.22□□□□□ -1.41
CTNNA1-228ENST00000521640 CHST2Q9Y4C5 530 aa6.22□□□□□ -1.41
CTNNA1-228ENST00000521640 MMACHCQ9Y4U1 282 aa6.22□□□□□ -1.41
CTNNA1-228ENST00000521640 A0A087WUU8 490 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 A0A1W2PS29 197 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 TRAPPC13A5PLN9 417 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 CHST10O43529 356 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 NUDT21O43809 227 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 PRAMEF2O60811 474 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 ZBTB11O95625 1053 aaPredicted RBP6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 IGF2P01344 180 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 EIF2S1P05198 315 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 ADORA3P0DMS8 318 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 ALPPL2P10696 532 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 NT5EP21589 574 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 PSMB9P28065 219 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 CSTF2P33240 577 aaKnown RBP eCLIP6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 TRHRP34981 398 aaPredicted RBP6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 RBM34P42696 430 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 STT3AP46977 705 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 OMPP47874 163 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 AVPR1BP47901 424 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 GIPRP48546 466 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 ZNF136P52737 540 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 LIMK1P53667 647 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 ST3GAL4Q11206 333 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 TMED1Q13445 227 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 GRM7Q14831 915 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 UBXN2BQ14CS0 331 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 ZNF141Q15928 474 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 DGUOKQ16854 277 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 TIGD6Q17RP2 521 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 WDR45BQ5MNZ6 344 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 ARMC4Q5T2S8 1044 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 ZNF836Q6ZNA1 936 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 PLEKHM3Q6ZWE6 761 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 RRM2BQ7LG56 351 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 SLC46A3Q7Z3Q1 461 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 VRK2Q86Y07 508 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 RBM45Q8IUH3 476 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 CYP4Z2PQ8N1L4 340 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 COX18Q8N8Q8 333 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 PROKR2Q8NFJ6 384 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 B3GNT7Q8NFL0 401 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 KBTBD8Q8NFY9 601 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 OR7G1Q8NGA0 311 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 TEX47Q8TBZ9 253 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 DYNC2LI1Q8TCX1 351 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 LMX1AQ8TE12 382 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 HS6ST2Q96MM7 605 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 LRFN5Q96NI6 719 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 SLC38A2Q96QD8 506 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 OR1F2PQ96R84 312 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 SLC38A3Q99624 504 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 MCHR1Q99705 422 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 YIPF4Q9BSR8 244 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 DCUN1D5Q9BTE7 237 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 G6PC3Q9BUM1 346 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 JAM3Q9BX67 310 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 WDR12Q9GZL7 423 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 NAA50Q9GZZ1 169 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 FN3KQ9H479 309 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 LIN28AQ9H9Z2 209 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 FAM60AQ9NP50 221 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 PDE7BQ9NP56 450 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 ISYNA1Q9NPH2 558 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 EQTNQ9NQ60 294 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 FBXO8Q9NRD0 319 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 IL20Q9NYY1 176 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 CCDC59Q9P031 241 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 RHCGQ9UBD6 479 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 SEC14L4Q9UDX3 406 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 KLHL3Q9UH77 587 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 CA14Q9ULX7 337 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 DIMT1Q9UNQ2 313 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 MRPS2Q9Y399 296 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 KCNE3Q9Y6H6 103 aa6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 LAMA2P24043 3122 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 MN1Q10571 1320 aaPredicted RBP6.21□□□□□ -1.42
CTNNA1-228ENST00000521640 COL5A1P20908 1838 aaPredicted RBP6.2□□□□□ -1.42
CTNNA1-228ENST00000521640 SLC9B1P1A6NJY1 282 aa6.2□□□□□ -1.42
CTNNA1-228ENST00000521640 KDM4EB2RXH2 506 aaPredicted RBP6.2□□□□□ -1.42
CTNNA1-228ENST00000521640 NPIPB9F8W1W9 429 aa6.2□□□□□ -1.42
CTNNA1-228ENST00000521640 H3BN98 237 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms