RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 PDLIM1O00151 329 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 UPK1AO00322 258 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 SCAMP2O15127 329 aaKnown RBP4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 ACOX3O15254 700 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 VEGFDO43915 354 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 SCN2BO60939 215 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 POP7O75817 140 aaKnown RBP4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 NDUFB4O95168 129 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 LRATO95237 230 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 STAMBPO95630 424 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 APODP05090 189 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 ERGP11308 486 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 VPREB1P12018 145 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 TEAD1P28347 426 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 GDI1P31150 447 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 TLX1P31314 330 aaPredicted RBP4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 TIA1P31483 386 aaKnown RBP eCLIP4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 HNF4AP41235 474 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 CDK3Q00526 305 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 MED21Q13503 144 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 DDX39BQ13838 428 aaKnown RBP4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 IRF4Q15306 451 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 CST6Q15828 149 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 NRF1Q16656 503 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 COLEC12Q5KU26 742 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 OR4F3Q6IEY1 312 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 CAPRIN2Q6IMN6 1127 aaKnown RBP4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 ANKRD26P1Q6NSI1 321 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 DUS1LQ6P1R4 473 aaKnown RBP4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 PNCKQ6P2M8 343 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 TRAT1Q6PIZ9 186 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 ENPP6Q6UWR7 440 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 UNC5DQ6UXZ4 953 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 RBPMS2Q6ZRY4 209 aaKnown RBP4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 DSG4Q86SJ6 1040 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 IQCHQ86VS3 1027 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 ANKRD46Q86W74 232 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 CFAP206Q8IYR0 622 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 MICU2Q8IYU8 434 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 CBR4Q8N4T8 237 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 C1orf52Q8N6N3 182 aaKnown RBP4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 PACRGLQ8N7B6 248 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 TRPV3Q8NET8 790 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 OR2T12Q8NG77 320 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 OR7G3Q8NG95 312 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 OR7A2PQ8NGA2 310 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 OR5AR1Q8NGP9 310 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 OR9A1PQ8NGU1 263 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 OR2L2Q8NH16 312 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 OR10A6Q8NH74 314 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 NEIL2Q969S2 332 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 ERGIC1Q969X5 290 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 RAB7BQ96AH8 199 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 FAM131CQ96AQ9 280 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 ELSPBP1Q96BH3 223 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 BIRC7Q96CA5 298 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 CENPNQ96H22 339 aaPredicted RBP4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 EGLN2Q96KS0 407 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 CNBD2Q96M20 576 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 NSMCE2Q96MF7 247 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 OR52E6Q96RD3 313 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 MYCBPQ99417 103 aaPredicted RBP4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 MTERF1Q99551 399 aaKnown RBP4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 CIB1Q99828 191 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 CENPKQ9BS16 269 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 THUMPD3Q9BV44 507 aaKnown RBP4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 S1PR5Q9H228 398 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 VCXQ9H320 206 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 DPEP2Q9H4A9 486 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 KLHL31Q9H511 634 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 Q9H521 79 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 ZNF696Q9H7X3 374 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 KAT8Q9H7Z6 458 aaKnown RBP4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 SGK2Q9HBY8 427 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 HINT3Q9NQE9 182 aaKnown RBP4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 DYRK4Q9NR20 520 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 MBNL1Q9NR56 388 aaKnown RBP4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 SEMA4GQ9NTN9 838 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 CRNNQ9UBG3 495 aaPredicted RBP4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 SLC23A2Q9UGH3 650 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 ZNF639Q9UID6 485 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 POMT1Q9Y6A1 747 aa4.47□□□□□ -1.69
CTNNA1-212ENST00000518919 SPTBN5Q9NRC6 3674 aaKnown RBP4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 ELOVL7A1L3X0 281 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 K7EQS6 105 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 CXCR6O00574 342 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 EI24O14681 340 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 SH3BGRLO75368 114 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 SCELO95171 688 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 LDLRP01130 860 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 SEMG1P04279 462 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 CYC1P08574 325 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 UMPSP11172 480 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 LAMP1P11279 417 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 FCGR1AP12314 374 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 NELFEP18615 380 aaKnown RBP4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 EFNA1P20827 205 aaPredicted RBP4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 PRPS1L1P21108 318 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 IL10P22301 178 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 MYF6P23409 242 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms