RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 MCMBPQ9BTE3 642 aa8.67□□□□□ -1.02
SH2D4A-202ENST00000518040 NMRAL1Q9HBL8 299 aa8.67□□□□□ -1.02
SH2D4A-202ENST00000518040 LZTFL1Q9NQ48 299 aa8.67□□□□□ -1.02
SH2D4A-202ENST00000518040 PFDN4Q9NQP4 134 aa8.67□□□□□ -1.02
SH2D4A-202ENST00000518040 NPAP1Q9NZP6 1156 aa8.67□□□□□ -1.02
SH2D4A-202ENST00000518040 KLHL9Q9P2J3 617 aa8.67□□□□□ -1.02
SH2D4A-202ENST00000518040 TXNDC16Q9P2K2 825 aa8.67□□□□□ -1.02
SH2D4A-202ENST00000518040 FBXO9Q9UK97 447 aaPredicted RBP8.67□□□□□ -1.02
SH2D4A-202ENST00000518040 CCDC189A1A4V9 331 aa8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 PHGDHO43175 533 aaKnown RBP8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 SNUPNO95149 360 aaKnown RBP8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 CLDN9O95484 217 aa8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 IL33O95760 270 aa8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 ANGPTL1O95841 491 aa8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 COX5AP20674 150 aa8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 FNTAP49354 379 aa8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 ZNF41P51814 821 aaPredicted RBP8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 DVL1P1P54792 670 aaPredicted RBP8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 PSG6Q00889 435 aa8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 LGALS3BPQ08380 585 aa8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 CSTF3Q12996 717 aaKnown RBP8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 CARTPTQ16568 116 aa8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 C1QTNF12Q5T7M4 302 aa8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 METTL2BQ6P1Q9 378 aaKnown RBP8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 ZNF662Q6ZS27 426 aa8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 FCRLAQ7L513 359 aa8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 MARCH3Q86UD3 253 aa8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 CDYL2Q8N8U2 506 aa8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 OR4N2Q8NGD1 307 aa8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 ZNF747Q9BV97 191 aa8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 SHCBP1LQ9BZQ2 653 aa8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 BPESC1Q9GZL8 116 aa8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 ALG9Q9H6U8 611 aa8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 METTL17Q9H7H0 456 aaPredicted RBP8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 BCO1Q9HAY6 547 aa8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 C3orf14Q9HBI5 128 aa8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 Q9N2J8 555 aa8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 GIMAP4Q9NUV9 329 aa8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 SENP1Q9P0U3 644 aa8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 UTS2RQ9UKP6 389 aa8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 PCDHB10Q9UN67 800 aa8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 TEX264Q9Y6I9 313 aa8.66□□□□□ -1.02
SH2D4A-202ENST00000518040 SHISA8B8ZZ34 492 aa8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 LY6HO94772 140 aa8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 SLITRK5O94991 958 aa8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 LORP23490 312 aaPredicted RBP8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 PSMA4P25789 261 aaKnown RBP8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 ELK4P28324 431 aa8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 CXCR5P32302 372 aa8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 EIF1P41567 113 aaKnown RBP8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 ALDH9A1P49189 494 aa8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 HILS1P60008 231 aa8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 RAB10P61026 200 aa8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 SNRPD2P62316 118 aaKnown RBP8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 PHC1P78364 1004 aa8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 DUSP2Q05923 314 aa8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 ZNHIT3Q15649 155 aaPredicted RBP8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 MIDNQ504T8 468 aa8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 AWAT1Q58HT5 328 aa8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 FRG2Q64ET8 278 aa8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 PEG10Q86TG7 708 aaKnown RBP8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 ISCA2Q86U28 154 aa8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 CCDC116Q8IYX3 515 aa8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 LILRA2Q8N149 483 aa8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 CEP112Q8N8E3 955 aa8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 TM4SF18Q96CE8 201 aa8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 RNF145Q96MT1 663 aa8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 FRG2BQ96QU4 278 aa8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 ATOH8Q96SQ7 321 aa8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 MRPL1Q9BYD6 325 aaKnown RBP8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 SAP130Q9H0E3 1048 aa8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 IPPKQ9H8X2 491 aa8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 CAB39LQ9H9S4 337 aa8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 NMRK1Q9NWW6 199 aa8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 MTO1Q9Y2Z2 717 aaKnown RBP8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 TNPO3Q9Y5L0 923 aaKnown RBP8.65□□□□□ -1.02
SH2D4A-202ENST00000518040 TTC36A6NLP5 189 aa8.65□□□□□ -1.03
SH2D4A-202ENST00000518040 UBXN8O00124 270 aa8.65□□□□□ -1.03
SH2D4A-202ENST00000518040 RGS14O43566 566 aa8.65□□□□□ -1.03
SH2D4A-202ENST00000518040 NTN1O95631 604 aa8.65□□□□□ -1.03
SH2D4A-202ENST00000518040 TACSTD2P09758 323 aa8.65□□□□□ -1.03
SH2D4A-202ENST00000518040 COL6A2P12110 1019 aa8.65□□□□□ -1.03
SH2D4A-202ENST00000518040 GIFP27352 417 aa8.65□□□□□ -1.03
SH2D4A-202ENST00000518040 MPIP34949 423 aa8.65□□□□□ -1.03
SH2D4A-202ENST00000518040 MANFP55145 182 aaKnown RBP8.65□□□□□ -1.03
SH2D4A-202ENST00000518040 CDH15P55291 814 aa8.65□□□□□ -1.03
SH2D4A-202ENST00000518040 ZNF155Q12901 538 aaPredicted RBP8.65□□□□□ -1.03
SH2D4A-202ENST00000518040 IFT88Q13099 833 aa8.65□□□□□ -1.03
SH2D4A-202ENST00000518040 GTF2H2Q13888 395 aa8.65□□□□□ -1.03
SH2D4A-202ENST00000518040 ZKSCAN8Q15776 578 aaPredicted RBP8.65□□□□□ -1.03
SH2D4A-202ENST00000518040 ZSWIM7Q19AV6 140 aa8.65□□□□□ -1.03
SH2D4A-202ENST00000518040 SWI5Q1ZZU3 235 aa8.65□□□□□ -1.03
SH2D4A-202ENST00000518040 SH2D4BQ5SQS7 431 aa8.65□□□□□ -1.03
SH2D4A-202ENST00000518040 HP1BP3Q5SSJ5 553 aaPredicted RBP8.65□□□□□ -1.03
SH2D4A-202ENST00000518040 TTC19Q6DKK2 380 aaPredicted RBP8.65□□□□□ -1.03
SH2D4A-202ENST00000518040 GTF2H2CQ6P1K8 395 aa8.65□□□□□ -1.03
SH2D4A-202ENST00000518040 B3GLCTQ6Y288 498 aa8.65□□□□□ -1.03
SH2D4A-202ENST00000518040 RINLQ6ZS11 566 aa8.65□□□□□ -1.03
SH2D4A-202ENST00000518040 COMMD6Q7Z4G1 85 aa8.65□□□□□ -1.03
SH2D4A-202ENST00000518040 C17orf53Q8N3J3 647 aaPredicted RBP8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms