RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 LCMT2O60294 686 aaKnown RBP11.53□□□□□ -0.56
PCM1-203ENST00000517545 ZGLP1P0C6A0 271 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 C6orf132Q5T0Z8 1188 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 SFRP4Q6FHJ7 346 aaPredicted RBP11.53□□□□□ -0.56
PCM1-203ENST00000517545 ZNF793Q6ZN11 406 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 SRFBP1Q8NEF9 429 aaKnown RBP11.53□□□□□ -0.56
PCM1-203ENST00000517545 OR2T4Q8NH00 348 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 RPLP0P6Q8NHW5 317 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 ABHD4Q8TB40 342 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 TTTY10Q9BZA0 68 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 ZCCHC2Q9C0B9 1178 aaKnown RBP11.53□□□□□ -0.56
PCM1-203ENST00000517545 MS4A7Q9GZW8 240 aaPredicted RBP11.53□□□□□ -0.56
PCM1-203ENST00000517545 AICDAQ9GZX7 198 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 TMEM168Q9H0V1 697 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 SLC38A1Q9H2H9 487 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 UBQLN3Q9H347 655 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 SLC35C2Q9NQQ7 365 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 STARD7Q9NQZ5 370 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 NFKBIL1Q9UBC1 381 aaPredicted RBP11.53□□□□□ -0.56
PCM1-203ENST00000517545 SLC13A4Q9UKG4 626 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 RNF215Q9Y6U7 377 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 NUP210Q8TEM1 1887 aaPredicted RBP11.53□□□□□ -0.56
PCM1-203ENST00000517545 MANSC4A6NHS7 340 aaPredicted RBP11.53□□□□□ -0.56
PCM1-203ENST00000517545 SLC9A3R1O14745 358 aaPredicted RBP11.53□□□□□ -0.56
PCM1-203ENST00000517545 KHNYNO15037 678 aaKnown RBP11.53□□□□□ -0.56
PCM1-203ENST00000517545 PGRMC2O15173 223 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 OR1F1O43749 312 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 ZIC2O95409 532 aaPredicted RBP11.53□□□□□ -0.56
PCM1-203ENST00000517545 ICAM2P13598 275 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 ATF1P18846 271 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 LCN1P31025 176 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 BLVRAP53004 296 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 TSPAN5P62079 268 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 SLC7A9P82251 487 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 CDC73Q6P1J9 531 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 BBS4Q96RK4 519 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 AIF1LQ9BQI0 150 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 SLC46A2Q9BY10 475 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 PPA2Q9H2U2 334 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 TRIM36Q9NQ86 728 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 HCN3Q9P1Z3 774 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 ZMIZ1Q9ULJ6 1067 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 RWDD3Q9Y3V2 267 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 FKBP7Q9Y680 259 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 KCNMB2Q9Y691 235 aa11.53□□□□□ -0.56
PCM1-203ENST00000517545 TRABD2BA6NFA1 517 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 TEX46H3BTG2 121 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 KLF4O43474 513 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 GMDSO60547 372 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 FCMRO60667 390 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 SOD2P04179 222 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 F8A1P23610 371 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 STAT5AP42229 794 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 SLC16A1P53985 500 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 CLDN2P57739 230 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 TAS2R38P59533 333 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 SHC2P98077 582 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 BDH1Q02338 343 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 SNTB2Q13425 540 aaKnown RBP11.52□□□□□ -0.57
PCM1-203ENST00000517545 GNA13Q14344 377 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 TUSC1Q2TAM9 212 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 TMEM255AQ5JRV8 349 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 NIPAL3Q6P499 406 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 BTN2A1Q7KYR7 527 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 ACOT11Q8WXI4 607 aaPredicted RBP11.52□□□□□ -0.57
PCM1-203ENST00000517545 AHCYL2Q96HN2 611 aaKnown RBP11.52□□□□□ -0.57
PCM1-203ENST00000517545 SCLYQ96I15 445 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 CAMK1GQ96NX5 476 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 ARHGDIGQ99819 225 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 AIFM2Q9BRQ8 373 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 TEX12Q9BXU0 123 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 C20orf85Q9H1P6 137 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 LYARQ9NX58 379 aaKnown RBP11.52□□□□□ -0.57
PCM1-203ENST00000517545 ENTPD4Q9Y227 616 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 A0A0G2JPF8 293 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 HNRNPCL2B2RXH8 293 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 HNRNPCL3B7ZW38 293 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 HNRNPCL4P0DMR1 293 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 NDUFV2P19404 249 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 SIM1P81133 766 aaPredicted RBP11.52□□□□□ -0.57
PCM1-203ENST00000517545 SPOUT1Q5T280 376 aaKnown RBP11.52□□□□□ -0.57
PCM1-203ENST00000517545 GARNL3Q5VVW2 1013 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 PARS2Q7L3T8 475 aaKnown RBP11.52□□□□□ -0.57
PCM1-203ENST00000517545 GDF7Q7Z4P5 450 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 TOR1AIP2Q8NFQ8 470 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 RGMAQ96B86 450 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 WDR89Q96FK6 387 aaPredicted RBP11.52□□□□□ -0.57
PCM1-203ENST00000517545 FAIM2Q9BWQ8 316 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 SPATA2Q9UM82 520 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 DNAH14Q0VDD8 3507 aa11.52□□□□□ -0.57
PCM1-203ENST00000517545 J3QLW9 94 aa11.51□□□□□ -0.57
PCM1-203ENST00000517545 BET1O15155 118 aa11.51□□□□□ -0.57
PCM1-203ENST00000517545 HOXA2O43364 376 aa11.51□□□□□ -0.57
PCM1-203ENST00000517545 PPM1BO75688 479 aa11.51□□□□□ -0.57
PCM1-203ENST00000517545 ADRB1P08588 477 aa11.51□□□□□ -0.57
PCM1-203ENST00000517545 ZNF19P17023 458 aa11.51□□□□□ -0.57
PCM1-203ENST00000517545 POU3F2P20265 443 aaPredicted RBP11.51□□□□□ -0.57
PCM1-203ENST00000517545 SSR2P43308 183 aa11.51□□□□□ -0.57
PCM1-203ENST00000517545 MMP15P51511 669 aa11.51□□□□□ -0.57
PCM1-203ENST00000517545 RAB33AQ14088 237 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms