RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 TMEM71Q6P5X7 295 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 LRRTM3Q86VH5 581 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 Q8N402 240 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 SFXN5Q8TD22 340 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 TAAR8Q969N4 342 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 INPP5KQ9BT40 448 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 H7C2Y5 167 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 GOSR2O14653 212 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 CASC3O15234 703 aaKnown RBP10.38□□□□□ -0.75
TRIM41-209ENST00000515834 KDELR2P33947 212 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 HMGCLP35914 325 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 HTR5AP47898 357 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 SSR4P51571 173 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 DCST2Q5T1A1 773 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 FAM217AQ8IXS0 508 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 AMDHD1Q96NU7 426 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 RANBP9Q96S59 729 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 MICU1Q9BPX6 476 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 SLC46A2Q9BY10 475 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 YTHDF1Q9BYJ9 559 aaKnown RBP10.38□□□□□ -0.75
TRIM41-209ENST00000515834 PREBQ9HCU5 417 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 SNAP29O95721 258 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 IGHEP01854 428 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 IL2RGP31785 369 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 PTGER4P35408 488 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 OPN5Q6U736 354 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 FBXW12Q6X9E4 464 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 TIFABQ6ZNK6 161 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 MMP21Q8N119 569 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 CDRT4Q8N9R6 151 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 WDSUB1Q8N9V3 476 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 ANKLE1Q8NAG6 615 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 RHEBL1Q8TAI7 183 aa10.38□□□□□ -0.75
TRIM41-209ENST00000515834 A0A1W2PQ09 198 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 PTGESO14684 152 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 NDUFB2O95178 105 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 OXSR1O95747 527 aaPredicted RBP10.37□□□□□ -0.75
TRIM41-209ENST00000515834 PSMB5P28074 263 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 ARHGAP19Q14CB8 494 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 NIPAL3Q6P499 406 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 SLC16A14Q7RTX9 510 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 HES7Q9BYE0 225 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 C3P01024 1663 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 D6RAR5 112 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 CREBL2O60519 120 aaPredicted RBP10.37□□□□□ -0.75
TRIM41-209ENST00000515834 HOXA9P31269 272 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 GLO1Q04760 184 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 SLC22A6Q4U2R8 563 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 TANGO2Q6ICL3 276 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 TLDC1Q6P9B6 456 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 PIGWQ7Z7B1 504 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 ADAMTS19Q8TE59 1207 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 PTTG2Q9NZH5 202 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 B3GNT3Q9Y2A9 372 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.37□□□□□ -0.75
TRIM41-209ENST00000515834 MYH10P35580 1976 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 SNAPC5O75971 98 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 PAHP00439 452 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 IL1AP01583 271 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 GMPRP36959 345 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 NR4A2P43354 598 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 PAN3Q58A45 887 aaKnown RBP10.37□□□□□ -0.75
TRIM41-209ENST00000515834 TP53INP2Q8IXH6 220 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 SNX18Q96RF0 628 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 GNG13Q9P2W3 67 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 HCSTQ9UBK5 93 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 HIDE1A8MVS5 230 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 SLC35E2BP0CK96 405 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 RAB3BP20337 219 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 GNB2P62879 340 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 MRPS21P82921 87 aaKnown RBP10.37□□□□□ -0.75
TRIM41-209ENST00000515834 KCNAB2Q13303 367 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 TMEM176BQ3YBM2 270 aaPredicted RBP10.37□□□□□ -0.75
TRIM41-209ENST00000515834 CDONQ4KMG0 1287 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 MKXQ8IYA7 352 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 ACOT4Q8N9L9 421 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 MUS81Q96NY9 551 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 XYLT2Q9H1B5 865 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 SLC43A1O75387 559 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 PSMB10P40306 273 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 DCDP81605 110 aaKnown RBP10.37□□□□□ -0.75
TRIM41-209ENST00000515834 LCTLQ6UWM7 567 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 FAM57BQ71RH2 274 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 TMEM150AQ86TG1 271 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 AMIGO3Q86WK7 504 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 DMBX1Q8NFW5 382 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 SDHAF2Q9NX18 166 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 URB1O60287 2271 aaKnown RBP10.37□□□□□ -0.75
TRIM41-209ENST00000515834 PIGBOS1A0A0B4J2F0 54 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 RAB27BO00194 218 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 HOXA11P31270 313 aaPredicted RBP10.37□□□□□ -0.75
TRIM41-209ENST00000515834 NUDT1P36639 197 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 DLSTP36957 453 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 AQP2P41181 271 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 CLDN17P56750 224 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 HOXC5Q00444 222 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 LIN28AQ9H9Z2 209 aaKnown RBP10.37□□□□□ -0.75
TRIM41-209ENST00000515834 INIPQ9NRY2 104 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 CBLCQ9ULV8 474 aa10.37□□□□□ -0.75
TRIM41-209ENST00000515834 FOXE1O00358 373 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms