RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 HOXD1Q9GZZ0 328 aa22.09■■□□□ 1.13
SNF8-213ENST00000514929 NKIRAS1Q9NYS0 192 aa22.09■■□□□ 1.13
SNF8-213ENST00000514929 ITGB1BP2Q9UKP3 347 aa22.09■■□□□ 1.13
SNF8-213ENST00000514929 NPIPA5A0A0B4J1W7 369 aa22.08■■□□□ 1.13
SNF8-213ENST00000514929 RNF103-CHMP3A0A140T963 221 aa22.08■■□□□ 1.13
SNF8-213ENST00000514929 NPIPA7E9PJI5 369 aa22.08■■□□□ 1.13
SNF8-213ENST00000514929 TNFRSF21O75509 655 aa22.08■■□□□ 1.13
SNF8-213ENST00000514929 NPIPA8P0DM63 369 aa22.08■■□□□ 1.13
SNF8-213ENST00000514929 ZNF17P17021 662 aa22.08■■□□□ 1.13
SNF8-213ENST00000514929 CPA2P48052 419 aa22.08■■□□□ 1.13
SNF8-213ENST00000514929 SLC18A1P54219 525 aa22.08■■□□□ 1.13
SNF8-213ENST00000514929 RPS3AP61247 264 aaKnown RBP22.08■■□□□ 1.13
SNF8-213ENST00000514929 CD226Q15762 336 aa22.08■■□□□ 1.13
SNF8-213ENST00000514929 TMEM44Q2T9K0 475 aa22.08■■□□□ 1.13
SNF8-213ENST00000514929 ANXA8L1Q5VT79 327 aa22.08■■□□□ 1.13
SNF8-213ENST00000514929 C6orf120Q7Z4R8 191 aa22.08■■□□□ 1.13
SNF8-213ENST00000514929 VPS37AQ8NEZ2 397 aa22.08■■□□□ 1.13
SNF8-213ENST00000514929 OR5D16Q8NGK9 328 aa22.08■■□□□ 1.13
SNF8-213ENST00000514929 B4GALNT2Q8NHY0 566 aa22.08■■□□□ 1.13
SNF8-213ENST00000514929 PHOSPHO1Q8TCT1 267 aa22.08■■□□□ 1.13
SNF8-213ENST00000514929 ACTRT2Q8TDY3 377 aa22.08■■□□□ 1.13
SNF8-213ENST00000514929 RBM24Q9BX46 236 aaKnown RBP22.08■■□□□ 1.13
SNF8-213ENST00000514929 PIGMQ9H3S5 423 aa22.08■■□□□ 1.13
SNF8-213ENST00000514929 TMBIM4Q9HC24 238 aa22.08■■□□□ 1.13
SNF8-213ENST00000514929 THAP1Q9NVV9 213 aa22.08■■□□□ 1.13
SNF8-213ENST00000514929 POLQO75417 2590 aa22.08■■□□□ 1.12
SNF8-213ENST00000514929 TUBAL3A6NHL2 446 aa22.07■■□□□ 1.12
SNF8-213ENST00000514929 H3BNH8 94 aa22.07■■□□□ 1.12
SNF8-213ENST00000514929 MATN1P21941 496 aa22.07■■□□□ 1.12
SNF8-213ENST00000514929 CLNS1AP54105 237 aaKnown RBP22.07■■□□□ 1.12
SNF8-213ENST00000514929 RPS26P62854 115 aaKnown RBP22.07■■□□□ 1.12
SNF8-213ENST00000514929 SGCBQ16585 318 aa22.07■■□□□ 1.12
SNF8-213ENST00000514929 ATG16L1Q676U5 607 aa22.07■■□□□ 1.12
SNF8-213ENST00000514929 ANKRD46Q86W74 232 aa22.07■■□□□ 1.12
SNF8-213ENST00000514929 CLEC4FQ8N1N0 589 aa22.07■■□□□ 1.12
SNF8-213ENST00000514929 FAM222BQ8WU58 562 aa22.07■■□□□ 1.12
SNF8-213ENST00000514929 FIG4Q92562 907 aa22.07■■□□□ 1.12
SNF8-213ENST00000514929 ZBTB8AQ96BR9 441 aa22.07■■□□□ 1.12
SNF8-213ENST00000514929 TESCQ96BS2 214 aa22.07■■□□□ 1.12
SNF8-213ENST00000514929 SLC35G5Q96KT7 338 aa22.07■■□□□ 1.12
SNF8-213ENST00000514929 MED17Q9NVC6 651 aa22.07■■□□□ 1.12
SNF8-213ENST00000514929 PACSIN3Q9UKS6 424 aa22.07■■□□□ 1.12
SNF8-213ENST00000514929 NUP214P35658 2090 aaPredicted RBP22.07■■□□□ 1.12
SNF8-213ENST00000514929 OTOGQ6ZRI0 2925 aa22.07■■□□□ 1.12
SNF8-213ENST00000514929 PRSS51A0A1B0GVH4 220 aa22.06■■□□□ 1.12
SNF8-213ENST00000514929 A0A1W2PNV4 684 aa22.06■■□□□ 1.12
SNF8-213ENST00000514929 DUXAA6NLW8 204 aa22.06■■□□□ 1.12
SNF8-213ENST00000514929 SDHDO14521 159 aa22.06■■□□□ 1.12
SNF8-213ENST00000514929 ANKRD28O15084 1053 aa22.06■■□□□ 1.12
SNF8-213ENST00000514929 CPSF4O95639 269 aaKnown RBP22.06■■□□□ 1.12
SNF8-213ENST00000514929 CRHP06850 196 aa22.06■■□□□ 1.12
SNF8-213ENST00000514929 SORDQ00796 357 aa22.06■■□□□ 1.12
SNF8-213ENST00000514929 DPY19L1Q2PZI1 675 aa22.06■■□□□ 1.12
SNF8-213ENST00000514929 PLPPR5Q32ZL2 321 aa22.06■■□□□ 1.12
SNF8-213ENST00000514929 OGFOD2Q6N063 350 aa22.06■■□□□ 1.12
SNF8-213ENST00000514929 MTERF4Q7Z6M4 381 aaKnown RBP22.06■■□□□ 1.12
SNF8-213ENST00000514929 WDR75Q8IWA0 830 aaKnown RBP22.06■■□□□ 1.12
SNF8-213ENST00000514929 GTPBP8Q8N3Z3 284 aaPredicted RBP22.06■■□□□ 1.12
SNF8-213ENST00000514929 ZNF614Q8N883 585 aa22.06■■□□□ 1.12
SNF8-213ENST00000514929 CNEP1R1Q8N9A8 125 aa22.06■■□□□ 1.12
SNF8-213ENST00000514929 TLCD1Q96CP7 247 aa22.06■■□□□ 1.12
SNF8-213ENST00000514929 ZNF845Q96IR2 970 aaPredicted RBP22.06■■□□□ 1.12
SNF8-213ENST00000514929 DNAJB12Q9NXW2 375 aaKnown RBP22.06■■□□□ 1.12
SNF8-213ENST00000514929 MARCOQ9UEW3 520 aaPredicted RBP22.06■■□□□ 1.12
SNF8-213ENST00000514929 ZNF175Q9Y473 711 aa22.06■■□□□ 1.12
SNF8-213ENST00000514929 TNFSF12-TNFSF13A0A0A6YY99 330 aa22.05■■□□□ 1.12
SNF8-213ENST00000514929 TRPC5OSA6NMA1 111 aa22.05■■□□□ 1.12
SNF8-213ENST00000514929 EIF1AYO14602 144 aaKnown RBP22.05■■□□□ 1.12
SNF8-213ENST00000514929 HDAC3O15379 428 aa22.05■■□□□ 1.12
SNF8-213ENST00000514929 SNNO75324 88 aaPredicted RBP22.05■■□□□ 1.12
SNF8-213ENST00000514929 TNFSF13O75888 250 aa22.05■■□□□ 1.12
SNF8-213ENST00000514929 KITP10721 976 aa22.05■■□□□ 1.12
SNF8-213ENST00000514929 RNF144AP50876 292 aaPredicted RBP22.05■■□□□ 1.12
SNF8-213ENST00000514929 ATP12AP54707 1039 aa22.05■■□□□ 1.12
SNF8-213ENST00000514929 PON3Q15166 354 aa22.05■■□□□ 1.12
SNF8-213ENST00000514929 KLHL26Q53HC5 615 aa22.05■■□□□ 1.12
SNF8-213ENST00000514929 SPANXN4Q5MJ08 99 aa22.05■■□□□ 1.12
SNF8-213ENST00000514929 SPATA19Q7Z5L4 167 aa22.05■■□□□ 1.12
SNF8-213ENST00000514929 MED12LQ86YW9 2145 aa22.05■■□□□ 1.12
SNF8-213ENST00000514929 METTL25Q8N6Q8 603 aa22.05■■□□□ 1.12
SNF8-213ENST00000514929 FNDC9Q8TBE3 224 aa22.05■■□□□ 1.12
SNF8-213ENST00000514929 RAB3IL1Q8TBN0 382 aa22.05■■□□□ 1.12
SNF8-213ENST00000514929 RNF145Q96MT1 663 aa22.05■■□□□ 1.12
SNF8-213ENST00000514929 SDF2Q99470 211 aa22.05■■□□□ 1.12
SNF8-213ENST00000514929 MANSC1Q9H8J5 431 aa22.05■■□□□ 1.12
SNF8-213ENST00000514929 GALNT8Q9NY28 637 aa22.05■■□□□ 1.12
SNF8-213ENST00000514929 C7orf72A4D263 438 aa22.04■■□□□ 1.12
SNF8-213ENST00000514929 E9PBE3 544 aa22.04■■□□□ 1.12
SNF8-213ENST00000514929 GTPBP1O00178 669 aaKnown RBP22.04■■□□□ 1.12
SNF8-213ENST00000514929 SCN2BO60939 215 aa22.04■■□□□ 1.12
SNF8-213ENST00000514929 CTAG2O75638 210 aa22.04■■□□□ 1.12
SNF8-213ENST00000514929 SMNDC1O75940 238 aaKnown RBP eCLIP22.04■■□□□ 1.12
SNF8-213ENST00000514929 NUDT14O95848 222 aa22.04■■□□□ 1.12
SNF8-213ENST00000514929 ALDOCP09972 364 aaKnown RBP22.04■■□□□ 1.12
SNF8-213ENST00000514929 S100A3P33764 101 aa22.04■■□□□ 1.12
SNF8-213ENST00000514929 EIF1AXP47813 144 aaKnown RBP22.04■■□□□ 1.12
SNF8-213ENST00000514929 NME5P56597 212 aa22.04■■□□□ 1.12
SNF8-213ENST00000514929 ZNF117Q03924 483 aa22.04■■□□□ 1.12
SNF8-213ENST00000514929 FAM174BQ3ZCQ3 159 aa22.04■■□□□ 1.12
SNF8-213ENST00000514929 PPP4R4Q6NUP7 873 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms