RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 HMGCS1Q01581 520 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 PIGFQ07326 219 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 PWP1Q13610 501 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 PTCHD3Q3KNS1 767 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 MPPE1Q53F39 396 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 LYPLAL1Q5VWZ2 237 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 LINGO2Q7L985 606 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 LHFPL4Q7Z7J7 247 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 TMEM145Q8NBT3 493 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 DMBX1Q8NFW5 382 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 OR56A3Q8NH54 315 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 ZDHHC16Q969W1 377 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 SPACA9Q96E40 222 aaPredicted RBP7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 SCRN2Q96FV2 425 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 Q96MT0 163 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 ZNF583Q96ND8 569 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 KATNB1Q9BVA0 655 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 RBCK1Q9BYM8 510 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 ASIC5Q9NY37 505 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 SLC25A37Q9NYZ2 338 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 HS3ST2Q9Y278 367 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 MUC22E2RYF6 1773 aaPredicted RBP7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 KIF26AQ9ULI4 1882 aaPredicted RBP7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 TRBV5-3A0A0A0MS03 114 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 CXorf51AA0A1B0GTR3 108 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 A0A1W2PRU2 124 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 B4DXG7 233 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 LOC730098B7Z3J9 87 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 GTPBP1O00178 669 aaKnown RBP7□□□□□ -1.29
PDLIM5-219ENST00000514743 FABP7O15540 132 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 FMO6PO60774 539 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 CFDP00746 253 aaPredicted RBP7□□□□□ -1.29
PDLIM5-219ENST00000514743 EBLN1P0CF75 366 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 NR2F1P10589 423 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 LAG3P18627 525 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 GGT1P19440 569 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 SERPINA4P29622 427 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 TLX1P31314 330 aaPredicted RBP7□□□□□ -1.29
PDLIM5-219ENST00000514743 MC3RP41968 323 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 RGS4P49798 205 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 RAC3P60763 192 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 MC2RQ01718 297 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 C22orf39Q6P5X5 142 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 LILRA6Q6PI73 481 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 TPRG1Q6ZUI0 275 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 CMTM8Q8IZV2 173 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 ACBD4Q8NC06 268 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 CAMKVQ8NCB2 501 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 ADPRHL1Q8NDY3 354 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 BBS1Q8NFJ9 593 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 OR52N2Q8NGI0 321 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 RORBQ92753 470 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 SLC46A2Q9BY10 475 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 PRO1933Q9H354 126 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 BCO1Q9HAY6 547 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 SLC6A13Q9NSD5 602 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 KCMF1Q9P0J7 381 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 LSM7Q9UK45 103 aaKnown RBP7□□□□□ -1.29
PDLIM5-219ENST00000514743 NUP210Q8TEM1 1887 aaPredicted RBP7□□□□□ -1.29
PDLIM5-219ENST00000514743 KCNE1BA0A087WTH5 132 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 HCN1O60741 890 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 DKK1O94907 266 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 TGFBR1P36897 503 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 NSG1P42857 185 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 WDR5P61964 334 aaKnown RBP7□□□□□ -1.29
PDLIM5-219ENST00000514743 IL18R1Q13478 541 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 KRT33BQ14525 404 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 GPR19Q15760 415 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 NKG7Q16617 165 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 PLEKHN1Q494U1 663 aaPredicted RBP7□□□□□ -1.29
PDLIM5-219ENST00000514743 CYBRD1Q53TN4 286 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 PDE4DIPQ5VU43 2346 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 C1orf53Q5VUE5 145 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 ANKRD34AQ69YU3 496 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 GLYATQ6IB77 296 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 ZNF813Q6ZN06 617 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 PROSER1Q86XN7 944 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 CBLN2Q8IUK8 224 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 VRK3Q8IV63 474 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 ENTHD1Q8IYW4 607 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 C10orf111Q8N326 155 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 KRTCAP2Q8N6L1 136 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 AMER2Q8N7J2 671 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 FAM86B1Q8N7N1 296 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 CCDC54Q8NEL0 328 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 OR8J3Q8NGG0 315 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 PACRGQ96M98 296 aaPredicted RBP7□□□□□ -1.29
PDLIM5-219ENST00000514743 CCDC115Q96NT0 180 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 PIGQQ9BRB3 760 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 UGT2B28Q9BY64 529 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 CLMPQ9H6B4 373 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 BRF2Q9HAW0 419 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 ZDHHC3Q9NYG2 299 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 PDE10AQ9Y233 779 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 PUS1Q9Y606 427 aaKnown RBP eCLIP7□□□□□ -1.29
PDLIM5-219ENST00000514743 MANBAO00462 879 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 FRS3O43559 492 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 PRAMEF4O60810 478 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 CYP7B1O75881 506 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 MPC2O95563 127 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms