RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 E7ENQ6 273 aa3.67□□□□□ -1.82
HMGCS1-207ENST00000514610 TNFSF11O14788 317 aa3.67□□□□□ -1.82
HMGCS1-207ENST00000514610 GPX5O75715 221 aa3.67□□□□□ -1.82
HMGCS1-207ENST00000514610 LY6G6DO95868 133 aa3.67□□□□□ -1.82
HMGCS1-207ENST00000514610 IGHV3-23P01764 117 aa3.67□□□□□ -1.82
HMGCS1-207ENST00000514610 CSF2P04141 144 aa3.67□□□□□ -1.82
HMGCS1-207ENST00000514610 HBQ1P09105 142 aa3.67□□□□□ -1.82
HMGCS1-207ENST00000514610 CCDC166P0CW27 439 aa3.67□□□□□ -1.82
HMGCS1-207ENST00000514610 PDHBP11177 359 aa3.67□□□□□ -1.82
HMGCS1-207ENST00000514610 HTR2AP28223 471 aa3.67□□□□□ -1.82
HMGCS1-207ENST00000514610 KIF5BP33176 963 aa3.67□□□□□ -1.82
HMGCS1-207ENST00000514610 ACAA2P42765 397 aaKnown RBP3.67□□□□□ -1.82
HMGCS1-207ENST00000514610 NOVP48745 357 aa3.67□□□□□ -1.82
HMGCS1-207ENST00000514610 BDH1Q02338 343 aa3.67□□□□□ -1.82
HMGCS1-207ENST00000514610 TTC31Q49AM3 519 aaPredicted RBP3.67□□□□□ -1.82
HMGCS1-207ENST00000514610 PAGE2BQ5JRK9 111 aa3.67□□□□□ -1.82
HMGCS1-207ENST00000514610 RIPPLY2Q5TAB7 128 aa3.67□□□□□ -1.82
HMGCS1-207ENST00000514610 FHL5Q5TD97 284 aa3.67□□□□□ -1.82
HMGCS1-207ENST00000514610 KRTAP5-4Q6L8H1 288 aa3.67□□□□□ -1.82
HMGCS1-207ENST00000514610 ACSM5Q6NUN0 579 aa3.67□□□□□ -1.82
HMGCS1-207ENST00000514610 ZNF544Q6NX49 715 aa3.67□□□□□ -1.82
HMGCS1-207ENST00000514610 GET4Q7L5D6 327 aaPredicted RBP3.67□□□□□ -1.82
HMGCS1-207ENST00000514610 GPA33Q99795 319 aa3.67□□□□□ -1.82
HMGCS1-207ENST00000514610 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
HMGCS1-207ENST00000514610 CAB39LQ9H9S4 337 aa3.67□□□□□ -1.82
HMGCS1-207ENST00000514610 SLC35D1Q9NTN3 355 aa3.67□□□□□ -1.82
HMGCS1-207ENST00000514610 PAK1IP1Q9NWT1 392 aaPredicted RBP3.67□□□□□ -1.82
HMGCS1-207ENST00000514610 TMEM9Q9P0T7 183 aa3.67□□□□□ -1.82
HMGCS1-207ENST00000514610 RIMS3Q9UJD0 308 aa3.67□□□□□ -1.82
HMGCS1-207ENST00000514610 SF3B1O75533 1304 aaKnown RBP eCLIP3.67□□□□□ -1.82
HMGCS1-207ENST00000514610 PPIAL4CA0A0B4J2A2 164 aa3.66□□□□□ -1.82
HMGCS1-207ENST00000514610 EPOPA6NHQ4 379 aa3.66□□□□□ -1.82
HMGCS1-207ENST00000514610 ZFP92A6NM28 416 aa3.66□□□□□ -1.82
HMGCS1-207ENST00000514610 CLDN5O00501 218 aa3.66□□□□□ -1.82
HMGCS1-207ENST00000514610 ASNSP08243 561 aa3.66□□□□□ -1.82
HMGCS1-207ENST00000514610 PPIAL4GP0DN37 164 aa3.66□□□□□ -1.82
HMGCS1-207ENST00000514610 ZNF19P17023 458 aa3.66□□□□□ -1.82
HMGCS1-207ENST00000514610 ZBTB25P24278 435 aa3.66□□□□□ -1.82
HMGCS1-207ENST00000514610 NUCB2P80303 420 aa3.66□□□□□ -1.82
HMGCS1-207ENST00000514610 CNTN2Q02246 1040 aa3.66□□□□□ -1.82
HMGCS1-207ENST00000514610 OVGP1Q12889 678 aa3.66□□□□□ -1.82
HMGCS1-207ENST00000514610 LAGE3Q14657 143 aa3.66□□□□□ -1.82
HMGCS1-207ENST00000514610 ISXQ2M1V0 245 aa3.66□□□□□ -1.82
HMGCS1-207ENST00000514610 USH1GQ495M9 461 aa3.66□□□□□ -1.82
HMGCS1-207ENST00000514610 ZNF658Q5TYW1 1059 aaPredicted RBP3.66□□□□□ -1.82
HMGCS1-207ENST00000514610 WSCD1Q658N2 575 aa3.66□□□□□ -1.82
HMGCS1-207ENST00000514610 NCR3LG1Q68D85 454 aa3.66□□□□□ -1.82
HMGCS1-207ENST00000514610 TMEM17Q86X19 198 aa3.66□□□□□ -1.82
HMGCS1-207ENST00000514610 CADM2Q8N3J6 435 aa3.66□□□□□ -1.82
HMGCS1-207ENST00000514610 OSTF1Q92882 214 aa3.66□□□□□ -1.82
HMGCS1-207ENST00000514610 HAVCR1Q96D42 359 aa3.66□□□□□ -1.82
HMGCS1-207ENST00000514610 MAPKAP1Q9BPZ7 522 aa3.66□□□□□ -1.82
HMGCS1-207ENST00000514610 PPIAL4AQ9Y536 164 aa3.66□□□□□ -1.82
HMGCS1-207ENST00000514610 SPACA6W5XKT8 324 aa3.66□□□□□ -1.82
HMGCS1-207ENST00000514610 LOC100131303A0A0U1RQF7 123 aa3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 A0A1B0GWJ7 208 aa3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 OR6C65A6NJZ3 312 aa3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 KLLNB2CW77 178 aa3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 H3BMQ9 156 aa3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 WWP2O00308 870 aa3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 OR7A17O14581 309 aa3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 MAPK13O15264 365 aa3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 SERF1AO75920 110 aa3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 CABYRO75952 493 aa3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 UFL1O94874 794 aa3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 HEXBP07686 556 aa3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 TPSB2P20231 275 aa3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 DRD5P21918 477 aa3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 ADORA2BP29275 332 aa3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 RPL29P47914 159 aaKnown RBP3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 RIPPLY3P57055 190 aa3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 MRPS11P82912 194 aaKnown RBP3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 EWSR1Q01844 656 aaKnown RBP eCLIP3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 TPSAB1Q15661 275 aa3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 HSP90AA5PQ58FG0 334 aa3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 OR2B11Q5JQS5 317 aa3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 DTNBP1Q96EV8 351 aa3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 VPS39Q96JC1 886 aa3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 DUSP16Q9BY84 665 aa3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 Q9H3A6 140 aa3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 PPDPFQ9H3Y8 114 aa3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 PLSCR3Q9NRY6 295 aa3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 IL17CQ9P0M4 197 aa3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 LAMP5Q9UJQ1 280 aa3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 PDE10AQ9Y233 779 aa3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 GSTK1Q9Y2Q3 226 aa3.65□□□□□ -1.83
HMGCS1-207ENST00000514610 ATP10DQ9P241 1426 aa3.64□□□□□ -1.83
HMGCS1-207ENST00000514610 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.64□□□□□ -1.83
HMGCS1-207ENST00000514610 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.64□□□□□ -1.83
HMGCS1-207ENST00000514610 ZNF705EA8MWA4 302 aaPredicted RBP3.64□□□□□ -1.83
HMGCS1-207ENST00000514610 FCN1O00602 326 aa3.64□□□□□ -1.83
HMGCS1-207ENST00000514610 HAT1O14929 419 aa3.64□□□□□ -1.83
HMGCS1-207ENST00000514610 TM7SF2O76062 418 aa3.64□□□□□ -1.83
HMGCS1-207ENST00000514610 HSPB1P04792 205 aaKnown RBP3.64□□□□□ -1.83
HMGCS1-207ENST00000514610 STSP08842 583 aa3.64□□□□□ -1.83
HMGCS1-207ENST00000514610 DNAH10OSP0CZ25 163 aa3.64□□□□□ -1.83
HMGCS1-207ENST00000514610 CLUP10909 449 aa3.64□□□□□ -1.83
HMGCS1-207ENST00000514610 EPB41P11171 864 aaKnown RBP3.64□□□□□ -1.83
HMGCS1-207ENST00000514610 KRT13P13646 458 aa3.64□□□□□ -1.83
HMGCS1-207ENST00000514610 NT5EP21589 574 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms