RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 CTBP2P56545 445 aa13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 RAC1P63000 192 aa13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 MLC1Q15049 377 aa13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 EXOC3L2Q2M3D2 409 aa13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 CTU2Q2VPK5 515 aaKnown RBP13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 CPTPQ5TA50 214 aa13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 LRIG3Q6UXM1 1119 aa13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 C20orf204Q6ZNR8 217 aa13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 ESPNLQ6ZVH7 1005 aa13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 ZAR1Q86SH2 424 aa13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 DDIASQ8IXT1 998 aa13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 COX18Q8N8Q8 333 aa13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 LRRN4CLQ8ND94 238 aa13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 TWIST2Q8WVJ9 160 aa13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 JADE3Q92613 823 aa13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 FAM120BQ96EK7 910 aaKnown RBP13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 C16orf58Q96GQ5 468 aa13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 APOPT1Q96IL0 206 aa13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 RNF145Q96MT1 663 aa13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 NPAS1Q99742 590 aa13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 SMR3AQ99954 134 aa13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 PLSCR4Q9NRQ2 329 aa13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 DUSP22Q9NRW4 184 aa13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 GLRX2Q9NS18 164 aa13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 ZCCHC3Q9NUD5 404 aaKnown RBP13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 ARID1AO14497 2285 aa13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 FAM171A2A8MVW0 826 aa13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 CXCL13O43927 109 aa13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 NPHS1O60500 1241 aa13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 SYNGR4O95473 234 aa13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 CHRNGP07510 517 aa13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 BCKDHAP12694 445 aa13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 ME2P23368 584 aa13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 LOXP28300 417 aaPredicted RBP13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 MAPK1P28482 360 aa13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 HPCAL1P37235 193 aa13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 RPL3P39023 403 aaKnown RBP13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 LTBQ06643 244 aa13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 EXOSC6Q5RKV6 272 aaKnown RBP13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 PDSS1Q5T2R2 415 aa13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 ANKRD34AQ69YU3 496 aa13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 PRSS57Q6UWY2 283 aa13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 OR2V1Q8NHB1 315 aa13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 B4GALNT2Q8NHY0 566 aa13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 OTUB1Q96FW1 271 aaPredicted RBP13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 SH3YL1Q96HL8 342 aaPredicted RBP13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 HS3ST6Q96QI5 342 aa13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 STACQ99469 402 aa13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 BTBD2Q9BX70 525 aa13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 ZNF395Q9H8N7 513 aaPredicted RBP13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 EML4Q9HC35 981 aaKnown RBP13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 FANCFQ9NPI8 374 aa13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 SIRT3Q9NTG7 399 aaPredicted RBP13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 FBXO34Q9NWN3 711 aa13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 GIN1Q9NXP7 522 aa13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 ATP6V1HQ9UI12 483 aa13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 CLEC4AQ9UMR7 237 aa13.17□□□□□ -0.3
CCHCR1-229ENST00000512418 NSD1Q96L73 2696 aaPredicted RBP13.16□□□□□ -0.3
CCHCR1-229ENST00000512418 RAI1Q7Z5J4 1906 aaPredicted RBP13.16□□□□□ -0.3
CCHCR1-229ENST00000512418 ABCA2Q9BZC7 2435 aa13.16□□□□□ -0.3
CCHCR1-229ENST00000512418 TMEM233B4DJY2 109 aa13.16□□□□□ -0.3
CCHCR1-229ENST00000512418 TNFSF11O14788 317 aa13.16□□□□□ -0.3
CCHCR1-229ENST00000512418 PIP5K1BO14986 540 aa13.16□□□□□ -0.3
CCHCR1-229ENST00000512418 SCAMP2O15127 329 aaKnown RBP13.16□□□□□ -0.3
CCHCR1-229ENST00000512418 HMGN2P05204 90 aaKnown RBP13.16□□□□□ -0.3
CCHCR1-229ENST00000512418 EFNA1P20827 205 aaPredicted RBP13.16□□□□□ -0.3
CCHCR1-229ENST00000512418 EIF1P41567 113 aaKnown RBP13.16□□□□□ -0.3
CCHCR1-229ENST00000512418 POU6F2P78424 691 aaPredicted RBP13.16□□□□□ -0.3
CCHCR1-229ENST00000512418 LASP1Q14847 261 aaKnown RBP13.16□□□□□ -0.3
CCHCR1-229ENST00000512418 CD226Q15762 336 aa13.16□□□□□ -0.3
CCHCR1-229ENST00000512418 UGT3A2Q3SY77 523 aa13.16□□□□□ -0.3
CCHCR1-229ENST00000512418 ARL13AQ5H913 290 aaPredicted RBP13.16□□□□□ -0.3
CCHCR1-229ENST00000512418 BEX5Q5H9J7 111 aa13.16□□□□□ -0.3
CCHCR1-229ENST00000512418 CCNJQ5T5M9 372 aa13.16□□□□□ -0.3
CCHCR1-229ENST00000512418 HBMQ6B0K9 141 aa13.16□□□□□ -0.3
CCHCR1-229ENST00000512418 CLEC9AQ6UXN8 241 aa13.16□□□□□ -0.3
CCHCR1-229ENST00000512418 STAC2Q6ZMT1 411 aa13.16□□□□□ -0.3
CCHCR1-229ENST00000512418 BEND4Q6ZU67 534 aa13.16□□□□□ -0.3
CCHCR1-229ENST00000512418 C22orf34Q6ZV56 151 aa13.16□□□□□ -0.3
CCHCR1-229ENST00000512418 STK32CQ86UX6 486 aa13.16□□□□□ -0.3
CCHCR1-229ENST00000512418 TRABD2AQ86V40 505 aa13.16□□□□□ -0.3
CCHCR1-229ENST00000512418 CHMP6Q96FZ7 201 aa13.16□□□□□ -0.3
CCHCR1-229ENST00000512418 COX4I2Q96KJ9 171 aa13.16□□□□□ -0.3
CCHCR1-229ENST00000512418 PPP3R2Q96LZ3 170 aa13.16□□□□□ -0.3
CCHCR1-229ENST00000512418 PIGUQ9H490 435 aa13.16□□□□□ -0.3
CCHCR1-229ENST00000512418 TMEM185BQ9H7F4 350 aa13.16□□□□□ -0.3
CCHCR1-229ENST00000512418 TRAF6Q9Y4K3 522 aa13.16□□□□□ -0.3
CCHCR1-229ENST00000512418 A0A0J9YW62 118 aa13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 TLDC2A0PJX2 215 aa13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 OPN1LWP04000 364 aa13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 HEXAP06865 529 aa13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 THBDP07204 575 aa13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 TUBBP07437 444 aa13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 LINGO3P0C6S8 592 aa13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 ATP6V1C1P21283 382 aa13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 ELK4P28324 431 aa13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 ALDH3A1P30838 453 aa13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 NR1H2P55055 460 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms