RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 RFX3P48380 749 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 TMED10P49755 219 aaKnown RBP14.01□□□□□ -0.17
SCLT1-209ENST00000511426 ALDH6A1Q02252 535 aaKnown RBP14.01□□□□□ -0.17
SCLT1-209ENST00000511426 TEKQ02763 1124 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 PLCXD2Q0VAA5 305 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 TOP3AQ13472 1001 aaPredicted RBP14.01□□□□□ -0.17
SCLT1-209ENST00000511426 NNATQ16517 81 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 LCN10Q6JVE6 187 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 C1orf94Q6P1W5 598 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 PODNL1Q6PEZ8 512 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 TTC33Q6PID6 262 aaPredicted RBP14.01□□□□□ -0.17
SCLT1-209ENST00000511426 RRM2BQ7LG56 351 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 HMGN2P46Q86SG4 172 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 ESX1Q8N693 406 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 GALNT6Q8NCL4 622 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 OR4K5Q8NGD3 323 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 OR9Q2Q8NGE9 314 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 HS6ST2Q96MM7 605 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 MUS81Q96NY9 551 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 SPRY4Q9C004 299 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 ING2Q9H160 280 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 RIBC2Q9H4K1 309 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 PISDQ9UG56 409 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 BLOC1S6Q9UL45 172 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 HTR3EA5X5Y0 456 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 CLDN24A6NM45 220 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 CPSF4LA6NMK7 179 aaKnown RBP14.01□□□□□ -0.17
SCLT1-209ENST00000511426 CSTAP01040 98 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 ATXN8OSP0DMR3 200 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 OSMP13725 252 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 ABCD3P28288 659 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 ETV5P41161 510 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 NR0B1P51843 470 aaKnown RBP14.01□□□□□ -0.17
SCLT1-209ENST00000511426 CXCR4P61073 352 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 MYBPC1Q00872 1141 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 RBM48Q5RL73 367 aaKnown RBP14.01□□□□□ -0.17
SCLT1-209ENST00000511426 HES3Q5TGS1 186 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 FNDC7Q5VTL7 733 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 FAAH2Q6GMR7 532 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 PGBD2Q6P3X8 592 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 GALNT5Q7Z7M9 940 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 MISPQ8IVT2 679 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 APLFQ8IW19 511 aaPredicted RBP14.01□□□□□ -0.17
SCLT1-209ENST00000511426 DEPDC4Q8N2C3 294 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 SLC15A4Q8N697 577 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 ZNF614Q8N883 585 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 OR4C3Q8NH37 302 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 FBLIM1Q8WUP2 373 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 UCK2Q9BZX2 261 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 ZNF700Q9H0M5 742 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 PTRH2Q9Y3E5 179 aaKnown RBP14.01□□□□□ -0.17
SCLT1-209ENST00000511426 GMPPBQ9Y5P6 360 aa14.01□□□□□ -0.17
SCLT1-209ENST00000511426 SCN2AQ99250 2005 aa14□□□□□ -0.17
SCLT1-209ENST00000511426 A0A087WUU8 490 aa14□□□□□ -0.17
SCLT1-209ENST00000511426 NPIPA5A0A0B4J1W7 369 aa14□□□□□ -0.17
SCLT1-209ENST00000511426 TRIM64A6NGJ6 449 aa14□□□□□ -0.17
SCLT1-209ENST00000511426 C21orf140B9A014 251 aa14□□□□□ -0.17
SCLT1-209ENST00000511426 ALG1L2C9J202 215 aa14□□□□□ -0.17
SCLT1-209ENST00000511426 PROB1E7EW31 1015 aa14□□□□□ -0.17
SCLT1-209ENST00000511426 NPIPA7E9PJI5 369 aa14□□□□□ -0.17
SCLT1-209ENST00000511426 AGRPO00253 132 aa14□□□□□ -0.17
SCLT1-209ENST00000511426 CHP2O43745 196 aa14□□□□□ -0.17
SCLT1-209ENST00000511426 GDF9O60383 454 aa14□□□□□ -0.17
SCLT1-209ENST00000511426 MITFO75030 526 aaPredicted RBP14□□□□□ -0.17
SCLT1-209ENST00000511426 UTS2O95399 124 aa14□□□□□ -0.17
SCLT1-209ENST00000511426 GASTP01350 101 aa14□□□□□ -0.17
SCLT1-209ENST00000511426 NPIPA8P0DM63 369 aa14□□□□□ -0.17
SCLT1-209ENST00000511426 CSRP1P21291 193 aaKnown RBP14□□□□□ -0.17
SCLT1-209ENST00000511426 MMP11P24347 488 aa14□□□□□ -0.17
SCLT1-209ENST00000511426 RBM34P42696 430 aaKnown RBP14□□□□□ -0.17
SCLT1-209ENST00000511426 SLC6A8P48029 635 aa14□□□□□ -0.17
SCLT1-209ENST00000511426 IL1RL1Q01638 556 aa14□□□□□ -0.17
SCLT1-209ENST00000511426 OR1Q1Q15612 314 aa14□□□□□ -0.17
SCLT1-209ENST00000511426 CCDC157Q569K6 752 aa14□□□□□ -0.17
SCLT1-209ENST00000511426 TMEM154Q6P9G4 183 aa14□□□□□ -0.17
SCLT1-209ENST00000511426 ZNF730Q6ZMV8 503 aa14□□□□□ -0.17
SCLT1-209ENST00000511426 MBOAT2Q6ZWT7 520 aa14□□□□□ -0.17
SCLT1-209ENST00000511426 GDF7Q7Z4P5 450 aa14□□□□□ -0.17
SCLT1-209ENST00000511426 PIGXQ8TBF5 258 aa14□□□□□ -0.17
SCLT1-209ENST00000511426 HDAC2Q92769 488 aaKnown RBP14□□□□□ -0.17
SCLT1-209ENST00000511426 OMA1Q96E52 524 aa14□□□□□ -0.17
SCLT1-209ENST00000511426 NIPSNAP1Q9BPW8 284 aa14□□□□□ -0.17
SCLT1-209ENST00000511426 POLR1BQ9H9Y6 1135 aa14□□□□□ -0.17
SCLT1-209ENST00000511426 TUBA8Q9NY65 449 aaPredicted RBP14□□□□□ -0.17
SCLT1-209ENST00000511426 IGHV1-45A0A0A0MS14 117 aa13.99□□□□□ -0.17
SCLT1-209ENST00000511426 FRS3O43559 492 aa13.99□□□□□ -0.17
SCLT1-209ENST00000511426 MPZL2O60487 215 aa13.99□□□□□ -0.17
SCLT1-209ENST00000511426 REM1O75628 298 aa13.99□□□□□ -0.17
SCLT1-209ENST00000511426 UMODP07911 640 aa13.99□□□□□ -0.17
SCLT1-209ENST00000511426 UBL4AP11441 157 aa13.99□□□□□ -0.17
SCLT1-209ENST00000511426 CD82P27701 267 aa13.99□□□□□ -0.17
SCLT1-209ENST00000511426 ACAA2P42765 397 aaKnown RBP13.99□□□□□ -0.17
SCLT1-209ENST00000511426 ISL1P61371 349 aa13.99□□□□□ -0.17
SCLT1-209ENST00000511426 CSNK2BP67870 215 aa13.99□□□□□ -0.17
SCLT1-209ENST00000511426 TUBA4AP68366 448 aa13.99□□□□□ -0.17
SCLT1-209ENST00000511426 PLAURQ03405 335 aa13.99□□□□□ -0.17
SCLT1-209ENST00000511426 TARDBPQ13148 414 aaKnown RBP eCLIP13.99□□□□□ -0.171e-7■■■■□ 24.6
SCLT1-209ENST00000511426 SEC23BQ15437 767 aa13.99□□□□□ -0.17
SCLT1-209ENST00000511426 ANKRD34AQ69YU3 496 aa13.99□□□□□ -0.17
SCLT1-209ENST00000511426 PLAG1Q6DJT9 500 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms