RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 GANABQ14697 944 aaKnown RBP12.65□□□□□ -0.38
DDX41-212ENST00000511040 ARHGAP11BQ3KRB8 267 aa12.65□□□□□ -0.38
DDX41-212ENST00000511040 KLHL26Q53HC5 615 aa12.65□□□□□ -0.38
DDX41-212ENST00000511040 C6orf10Q5SRN2 563 aa12.65□□□□□ -0.38
DDX41-212ENST00000511040 PDZK1Q5T2W1 519 aa12.65□□□□□ -0.38
DDX41-212ENST00000511040 ATAD3BQ5T9A4 648 aa12.65□□□□□ -0.38
DDX41-212ENST00000511040 SP5Q6BEB4 398 aaPredicted RBP12.65□□□□□ -0.38
DDX41-212ENST00000511040 SLC2A7Q6PXP3 512 aa12.65□□□□□ -0.38
DDX41-212ENST00000511040 ENPP6Q6UWR7 440 aa12.65□□□□□ -0.38
DDX41-212ENST00000511040 UBQLNLQ8IYU4 475 aa12.65□□□□□ -0.38
DDX41-212ENST00000511040 TRIML2Q8N7C3 387 aa12.65□□□□□ -0.38
DDX41-212ENST00000511040 ZNF527Q8NB42 609 aa12.65□□□□□ -0.38
DDX41-212ENST00000511040 TNIP2Q8NFZ5 429 aa12.65□□□□□ -0.38
DDX41-212ENST00000511040 SMPDL3BQ92485 455 aa12.65□□□□□ -0.38
DDX41-212ENST00000511040 ROPN1LQ96C74 230 aa12.65□□□□□ -0.38
DDX41-212ENST00000511040 ITCHQ96J02 903 aa12.65□□□□□ -0.38
DDX41-212ENST00000511040 NPAS1Q99742 590 aa12.65□□□□□ -0.38
DDX41-212ENST00000511040 TUBA1CQ9BQE3 449 aa12.65□□□□□ -0.38
DDX41-212ENST00000511040 HOXD1Q9GZZ0 328 aa12.65□□□□□ -0.38
DDX41-212ENST00000511040 RMND5AQ9H871 391 aa12.65□□□□□ -0.38
DDX41-212ENST00000511040 EXD2Q9NVH0 621 aa12.65□□□□□ -0.38
DDX41-212ENST00000511040 MKLN1Q9UL63 735 aa12.65□□□□□ -0.38
DDX41-212ENST00000511040 CARD8Q9Y2G2 431 aa12.65□□□□□ -0.38
DDX41-212ENST00000511040 MRPS18CQ9Y3D5 142 aaKnown RBP12.65□□□□□ -0.38
DDX41-212ENST00000511040 A0A0G2JND7 137 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 A0A1W2PQD3 144 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 OR2M5A3KFT3 312 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 PRAMEF27A3QJZ7 478 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 NKX2-6A6NCS4 301 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 H3BML4 177 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 GTPBP1O00178 669 aaKnown RBP12.64□□□□□ -0.39
DDX41-212ENST00000511040 HMGN4O00479 90 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 TOXO94900 526 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 ANP32DO95626 131 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 AK1P00568 194 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 SNRPB2P08579 225 aaKnown RBP12.64□□□□□ -0.39
DDX41-212ENST00000511040 CPN1P15169 458 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 NCF2P19878 526 aaPredicted RBP12.64□□□□□ -0.39
DDX41-212ENST00000511040 POU3F2P20265 443 aaPredicted RBP12.64□□□□□ -0.39
DDX41-212ENST00000511040 CHMP24386 653 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 PTGER4P35408 488 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 CLDN18P56856 261 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 GUCY1A3Q02108 690 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 ZNF117Q03924 483 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 LRRC74AQ0VAA2 488 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 ZNF630Q2M218 657 aaPredicted RBP12.64□□□□□ -0.39
DDX41-212ENST00000511040 GPAT3Q53EU6 434 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 AGKQ53H12 422 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 HEPHL1Q6MZM0 1159 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 LIX1LQ8IVB5 337 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 FUNDC1Q8IVP5 155 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 ANKFN1Q8N957 763 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 B4GALNT2Q8NHY0 566 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 ASB5Q8WWX0 329 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 ARSGQ96EG1 525 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 AURKBQ96GD4 344 aaPredicted RBP12.64□□□□□ -0.39
DDX41-212ENST00000511040 ZNF350Q9GZX5 532 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 MED17Q9NVC6 651 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 CCDC167Q9P0B6 97 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 KCNE5Q9UJ90 142 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 ZNF337Q9Y3M9 751 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 DTNAQ9Y4J8 743 aa12.64□□□□□ -0.39
DDX41-212ENST00000511040 KLF2Q9Y5W3 355 aaPredicted RBP12.64□□□□□ -0.39
DDX41-212ENST00000511040 ARHGAP21Q5T5U3 1957 aa12.63□□□□□ -0.39
DDX41-212ENST00000511040 H0YC42 278 aa12.63□□□□□ -0.39
DDX41-212ENST00000511040 H3BNH8 94 aa12.63□□□□□ -0.39
DDX41-212ENST00000511040 SEC14L5O43304 696 aa12.63□□□□□ -0.39
DDX41-212ENST00000511040 CYP7B1O75881 506 aa12.63□□□□□ -0.39
DDX41-212ENST00000511040 KRT75O95678 551 aa12.63□□□□□ -0.39
DDX41-212ENST00000511040 EPPINO95925 133 aa12.63□□□□□ -0.39
DDX41-212ENST00000511040 AGR2O95994 175 aa12.63□□□□□ -0.39
DDX41-212ENST00000511040 OPN1LWP04000 364 aa12.63□□□□□ -0.39
DDX41-212ENST00000511040 ZNF708P17019 499 aa12.63□□□□□ -0.39
DDX41-212ENST00000511040 MRPL19P49406 292 aaKnown RBP12.63□□□□□ -0.39
DDX41-212ENST00000511040 ZNF41P51814 821 aaPredicted RBP12.63□□□□□ -0.39
DDX41-212ENST00000511040 TPD52P55327 224 aaPredicted RBP12.63□□□□□ -0.39
DDX41-212ENST00000511040 RCAN2Q14206 197 aa12.63□□□□□ -0.39
DDX41-212ENST00000511040 SQLEQ14534 574 aa12.63□□□□□ -0.39
DDX41-212ENST00000511040 MAPK14Q16539 360 aa12.63□□□□□ -0.39
DDX41-212ENST00000511040 SYPL1Q16563 259 aa12.63□□□□□ -0.39
DDX41-212ENST00000511040 NSUN5P2Q63ZY6 315 aa12.63□□□□□ -0.39
DDX41-212ENST00000511040 TYW3Q6IPR3 259 aaKnown RBP12.63□□□□□ -0.39
DDX41-212ENST00000511040 CBLN3Q6UW01 205 aa12.63□□□□□ -0.39
DDX41-212ENST00000511040 MSANTD1Q6ZTZ1 278 aa12.63□□□□□ -0.39
DDX41-212ENST00000511040 MISPQ8IVT2 679 aa12.63□□□□□ -0.39
DDX41-212ENST00000511040 ARFGAP2Q8N6H7 521 aa12.63□□□□□ -0.39
DDX41-212ENST00000511040 TMCO5AQ8N6Q1 288 aa12.63□□□□□ -0.39
DDX41-212ENST00000511040 C9orf106Q8NAJ2 232 aa12.63□□□□□ -0.39
DDX41-212ENST00000511040 NAXEQ8NCW5 288 aa12.63□□□□□ -0.39
DDX41-212ENST00000511040 LILRB4Q8NHJ6 448 aa12.63□□□□□ -0.39
DDX41-212ENST00000511040 ZFP90Q8TF47 636 aa12.63□□□□□ -0.39
DDX41-212ENST00000511040 NMUR2Q9GZQ4 415 aa12.63□□□□□ -0.39
DDX41-212ENST00000511040 FGFR1OP2Q9NVK5 253 aa12.63□□□□□ -0.39
DDX41-212ENST00000511040 WDR45Q9Y484 360 aa12.63□□□□□ -0.39
DDX41-212ENST00000511040 CACNA1CQ13936 2221 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 SERINC4A6NH21 518 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 CD8B2A6NJW9 211 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 CLCA1A8K7I4 914 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 FAM47E-STBD1D6RA91 191 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 KIAA0513O60268 411 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms