RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-223ENST00000509900 AP3B1O00203 1094 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 NME6O75414 186 aaPredicted RBP8.29□□□□□ -1.08
PTPN20-223ENST00000509900 RAD51DO75771 328 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 KNG1P01042 644 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 YES1P07947 543 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 PABPC4LP0CB38 370 aaKnown RBP8.29□□□□□ -1.08
PTPN20-223ENST00000509900 CT45A8P0DMV1 189 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 CT45A9P0DMV2 189 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 GAAP10253 952 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 CPMP14384 443 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 DDX5P17844 614 aaKnown RBP8.29□□□□□ -1.08
PTPN20-223ENST00000509900 FPR2P25090 351 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 GABRB3P28472 473 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 EVI2BP34910 448 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 SERPINF1P36955 418 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 EMDP50402 254 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 CORO7P57737 925 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 KRTAP10-3P60369 221 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 ZP4Q12836 540 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 FAM189A2Q15884 450 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 TSNAXIP1Q2TAA8 658 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 CT45A2Q5DJT8 189 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 SH2D4BQ5SQS7 431 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 C6orf163Q5TEZ5 329 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 OR52E8Q6IFG1 317 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 CDPF1Q6NVV7 123 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 RBMS3Q6XE24 437 aaKnown RBP8.29□□□□□ -1.08
PTPN20-223ENST00000509900 C17orf107Q6ZR85 190 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 ESPNLQ6ZVH7 1005 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 ZCCHC24Q8N2G6 241 aaKnown RBP8.29□□□□□ -1.08
PTPN20-223ENST00000509900 TOR1AIP2Q8NFQ8 470 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 WDR60Q8WVS4 1066 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 TMIGD2Q96BF3 282 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 EFHD2Q96C19 240 aaPredicted RBP8.29□□□□□ -1.08
PTPN20-223ENST00000509900 SERPINB12Q96P63 405 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 DNAJC7Q99615 494 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 EGFL8Q99944 293 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 SRXN1Q9BYN0 137 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 PLK3Q9H4B4 646 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 TMEM185BQ9H7F4 350 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 NHEJ1Q9H9Q4 299 aaPredicted RBP8.29□□□□□ -1.08
PTPN20-223ENST00000509900 GP6Q9HCN6 339 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 TREM2Q9NZC2 230 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 FLRT3Q9NZU0 649 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 PAK5Q9P286 719 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 KLHL21Q9UJP4 597 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 DNAH3Q8TD57 4116 aa8.29□□□□□ -1.08
PTPN20-223ENST00000509900 TCRBV7S3A2A0A539 114 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 NPEPPSL1A6NEC2 478 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 B9A039 149 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 CLGNO14967 610 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 LIASO43766 372 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 GMFGO60234 142 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 FADS1O60427 444 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 TFP02787 698 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 PTMAP06454 111 aaKnown RBP8.28□□□□□ -1.08
PTPN20-223ENST00000509900 FAM58BPP0C7Q3 252 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 EPORP19235 508 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 PSMA4P25789 261 aaKnown RBP8.28□□□□□ -1.08
PTPN20-223ENST00000509900 SHC1P29353 583 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 IL12BP29460 328 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 HNMTP50135 292 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 XKP51811 444 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 PNLIPRP2P54317 469 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 LMO4P61968 165 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 CDKL1Q00532 357 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 COL10A1Q03692 680 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 RASGEF1BQ0VAM2 473 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 ARL13AQ5H913 290 aaPredicted RBP8.28□□□□□ -1.08
PTPN20-223ENST00000509900 EXOSC6Q5RKV6 272 aaKnown RBP8.28□□□□□ -1.08
PTPN20-223ENST00000509900 NPSR1Q6W5P4 371 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 SPATA19Q7Z5L4 167 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 KIR3DL3Q8N743 410 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 TRIM58Q8NG06 486 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 OR52R1Q8NGF1 315 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 UHMK1Q8TAS1 419 aaKnown RBP8.28□□□□□ -1.08
PTPN20-223ENST00000509900 DUSP19Q8WTR2 217 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 NEU4Q8WWR8 484 aaPredicted RBP8.28□□□□□ -1.08
PTPN20-223ENST00000509900 RGMAQ96B86 450 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 CMTM7Q96FZ5 175 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 CCDC42Q96M95 316 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 WWC2-AS2Q96NR7 200 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 EFCAB11Q9BUY7 163 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 CAPS2Q9BXY5 557 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 BRINP2Q9C0B6 783 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 WDR41Q9HAD4 459 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 NTMQ9P121 344 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 VDAC3Q9Y277 283 aa8.28□□□□□ -1.08
PTPN20-223ENST00000509900 TAPBPO15533 448 aa8.27□□□□□ -1.09
PTPN20-223ENST00000509900 PRKD3O94806 890 aa8.27□□□□□ -1.09
PTPN20-223ENST00000509900 IL33O95760 270 aa8.27□□□□□ -1.09
PTPN20-223ENST00000509900 IGFBP1P08833 259 aaPredicted RBP8.27□□□□□ -1.09
PTPN20-223ENST00000509900 SAGP10523 405 aaPredicted RBP8.27□□□□□ -1.09
PTPN20-223ENST00000509900 PCNAP12004 261 aa8.27□□□□□ -1.09
PTPN20-223ENST00000509900 ADMP35318 185 aa8.27□□□□□ -1.09
PTPN20-223ENST00000509900 BSGP35613 385 aa8.27□□□□□ -1.09
PTPN20-223ENST00000509900 RAP1GDS1P52306 607 aa8.27□□□□□ -1.09
PTPN20-223ENST00000509900 CARD18P57730 90 aa8.27□□□□□ -1.09
PTPN20-223ENST00000509900 BASP1P80723 227 aaKnown RBP8.27□□□□□ -1.09
PTPN20-223ENST00000509900 EFNB3Q15768 340 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms