RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 TUBA1CQ9BQE3 449 aa16.44■□□□□ 0.22
CLDND1-220ENST00000508902 UCK2Q9BZX2 261 aa16.44■□□□□ 0.22
CLDND1-220ENST00000508902 TACC2O95359 2948 aa16.44■□□□□ 0.22
CLDND1-220ENST00000508902 OR2M5A3KFT3 312 aa16.43■□□□□ 0.22
CLDND1-220ENST00000508902 NDUFB5O43674 189 aa16.43■□□□□ 0.22
CLDND1-220ENST00000508902 ACTL6AO96019 429 aa16.43■□□□□ 0.22
CLDND1-220ENST00000508902 KRT16P08779 473 aa16.43■□□□□ 0.22
CLDND1-220ENST00000508902 CPN1P15169 458 aa16.43■□□□□ 0.22
CLDND1-220ENST00000508902 ZNF708P17019 499 aa16.43■□□□□ 0.22
CLDND1-220ENST00000508902 HK1P19367 917 aa16.43■□□□□ 0.22
CLDND1-220ENST00000508902 PSMA4P25789 261 aaKnown RBP16.43■□□□□ 0.22
CLDND1-220ENST00000508902 HTR1EP28566 365 aa16.43■□□□□ 0.22
CLDND1-220ENST00000508902 SMSP52788 366 aa16.43■□□□□ 0.22
CLDND1-220ENST00000508902 C17orf67Q0P5P2 114 aa16.43■□□□□ 0.22
CLDND1-220ENST00000508902 RCAN2Q14206 197 aa16.43■□□□□ 0.22
CLDND1-220ENST00000508902 ARHGAP11BQ3KRB8 267 aa16.43■□□□□ 0.22
CLDND1-220ENST00000508902 FLYWCH1Q4VC44 716 aa16.43■□□□□ 0.22
CLDND1-220ENST00000508902 TYW3Q6IPR3 259 aaKnown RBP16.43■□□□□ 0.22
CLDND1-220ENST00000508902 SLC2A7Q6PXP3 512 aa16.43■□□□□ 0.22
CLDND1-220ENST00000508902 FRRS1Q6ZNA5 592 aa16.43■□□□□ 0.22
CLDND1-220ENST00000508902 ACAD11Q709F0 780 aa16.43■□□□□ 0.22
CLDND1-220ENST00000508902 HMGN2P46Q86SG4 172 aa16.43■□□□□ 0.22
CLDND1-220ENST00000508902 ACBD4Q8NC06 268 aa16.43■□□□□ 0.22
CLDND1-220ENST00000508902 TNIP2Q8NFZ5 429 aa16.43■□□□□ 0.22
CLDND1-220ENST00000508902 STON2Q8WXE9 905 aa16.43■□□□□ 0.22
CLDND1-220ENST00000508902 GTF2H4Q92759 462 aa16.43■□□□□ 0.22
CLDND1-220ENST00000508902 ZG16BQ96DA0 208 aa16.43■□□□□ 0.22
CLDND1-220ENST00000508902 SFXN2Q96NB2 322 aa16.43■□□□□ 0.22
CLDND1-220ENST00000508902 PAIP1Q9H074 479 aaKnown RBP16.43■□□□□ 0.22
CLDND1-220ENST00000508902 NPHS2Q9NP85 383 aa16.43■□□□□ 0.22
CLDND1-220ENST00000508902 NPDC1Q9NQX5 325 aaPredicted RBP16.43■□□□□ 0.22
CLDND1-220ENST00000508902 PCDHGB4Q9UN71 923 aa16.43■□□□□ 0.22
CLDND1-220ENST00000508902 ZNF337Q9Y3M9 751 aa16.43■□□□□ 0.22
CLDND1-220ENST00000508902 KLF2Q9Y5W3 355 aaPredicted RBP16.43■□□□□ 0.22
CLDND1-220ENST00000508902 FAM234BA2RU67 622 aa16.42■□□□□ 0.22
CLDND1-220ENST00000508902 NKX2-6A6NCS4 301 aa16.42■□□□□ 0.22
CLDND1-220ENST00000508902 KIAA0513O60268 411 aa16.42■□□□□ 0.22
CLDND1-220ENST00000508902 UGT2B17O75795 530 aa16.42■□□□□ 0.22
CLDND1-220ENST00000508902 EPPINO95925 133 aa16.42■□□□□ 0.22
CLDND1-220ENST00000508902 IL6P05231 212 aa16.42■□□□□ 0.22
CLDND1-220ENST00000508902 CHRM4P08173 479 aa16.42■□□□□ 0.22
CLDND1-220ENST00000508902 GABRA1P14867 456 aa16.42■□□□□ 0.22
CLDND1-220ENST00000508902 IL11P20809 199 aa16.42■□□□□ 0.22
CLDND1-220ENST00000508902 SUCLG1P53597 346 aaKnown RBP16.42■□□□□ 0.22
CLDND1-220ENST00000508902 ATP12AP54707 1039 aa16.42■□□□□ 0.22
CLDND1-220ENST00000508902 PLPPR5Q32ZL2 321 aa16.42■□□□□ 0.22
CLDND1-220ENST00000508902 PDZK1Q5T2W1 519 aa16.42■□□□□ 0.22
CLDND1-220ENST00000508902 AP1ARQ63HQ0 302 aa16.42■□□□□ 0.22
CLDND1-220ENST00000508902 TMEM211Q6ICI0 200 aa16.42■□□□□ 0.22
CLDND1-220ENST00000508902 BHLHB9Q6PI77 547 aa16.42■□□□□ 0.22
CLDND1-220ENST00000508902 ZNF621Q6ZSS3 439 aa16.42■□□□□ 0.22
CLDND1-220ENST00000508902 C10orf111Q8N326 155 aa16.42■□□□□ 0.22
CLDND1-220ENST00000508902 ANKFN1Q8N957 763 aa16.42■□□□□ 0.22
CLDND1-220ENST00000508902 C9orf106Q8NAJ2 232 aa16.42■□□□□ 0.22
CLDND1-220ENST00000508902 RELL2Q8NC24 303 aaPredicted RBP16.42■□□□□ 0.22
CLDND1-220ENST00000508902 VPS37AQ8NEZ2 397 aa16.42■□□□□ 0.22
CLDND1-220ENST00000508902 RND1Q92730 232 aa16.42■□□□□ 0.22
CLDND1-220ENST00000508902 ZBTB18Q99592 522 aa16.42■□□□□ 0.22
CLDND1-220ENST00000508902 QRSL1Q9H0R6 528 aaKnown RBP16.42■□□□□ 0.22
CLDND1-220ENST00000508902 RUBCNLQ9H714 662 aa16.42■□□□□ 0.22
CLDND1-220ENST00000508902 SLAMF8Q9P0V8 285 aa16.42■□□□□ 0.22
CLDND1-220ENST00000508902 CLCF1Q9UBD9 225 aa16.42■□□□□ 0.22
CLDND1-220ENST00000508902 DCTN4Q9UJW0 460 aa16.42■□□□□ 0.22
CLDND1-220ENST00000508902 MKLN1Q9UL63 735 aa16.42■□□□□ 0.22
CLDND1-220ENST00000508902 ICAM5Q9UMF0 924 aa16.42■□□□□ 0.22
CLDND1-220ENST00000508902 VDAC3Q9Y277 283 aa16.42■□□□□ 0.22
CLDND1-220ENST00000508902 FAM90A27PA6NNH2 459 aa16.41■□□□□ 0.22
CLDND1-220ENST00000508902 AHRRA9YTQ3 701 aa16.41■□□□□ 0.22
CLDND1-220ENST00000508902 RFXANKO14593 260 aa16.41■□□□□ 0.22
CLDND1-220ENST00000508902 CHMP24386 653 aa16.41■□□□□ 0.22
CLDND1-220ENST00000508902 CEACAM8P31997 349 aaPredicted RBP16.41■□□□□ 0.22
CLDND1-220ENST00000508902 KHKP50053 298 aa16.41■□□□□ 0.22
CLDND1-220ENST00000508902 ZNF136P52737 540 aa16.41■□□□□ 0.22
CLDND1-220ENST00000508902 CLDN20P56880 219 aa16.41■□□□□ 0.22
CLDND1-220ENST00000508902 GUCY1A3Q02108 690 aa16.41■□□□□ 0.22
CLDND1-220ENST00000508902 SRYQ05066 204 aa16.41■□□□□ 0.22
CLDND1-220ENST00000508902 GANABQ14697 944 aaKnown RBP16.41■□□□□ 0.22
CLDND1-220ENST00000508902 TOMM34Q15785 309 aaPredicted RBP16.41■□□□□ 0.22
CLDND1-220ENST00000508902 ZNF141Q15928 474 aa16.41■□□□□ 0.22
CLDND1-220ENST00000508902 SYPL1Q16563 259 aa16.41■□□□□ 0.22
CLDND1-220ENST00000508902 PAGE3Q5JUK9 113 aa16.41■□□□□ 0.22
CLDND1-220ENST00000508902 RIPPLY2Q5TAB7 128 aa16.41■□□□□ 0.22
CLDND1-220ENST00000508902 RAET1LQ5VY80 246 aa16.41■□□□□ 0.22
CLDND1-220ENST00000508902 NSUN5P2Q63ZY6 315 aa16.41■□□□□ 0.22
CLDND1-220ENST00000508902 BLOC1S3Q6QNY0 202 aa16.41■□□□□ 0.22
CLDND1-220ENST00000508902 LILRB4Q8NHJ6 448 aa16.41■□□□□ 0.22
CLDND1-220ENST00000508902 XAGE5Q8WWM1 108 aa16.41■□□□□ 0.22
CLDND1-220ENST00000508902 ROPN1LQ96C74 230 aa16.41■□□□□ 0.22
CLDND1-220ENST00000508902 NMUR2Q9GZQ4 415 aa16.41■□□□□ 0.22
CLDND1-220ENST00000508902 SAP130Q9H0E3 1048 aa16.41■□□□□ 0.22
CLDND1-220ENST00000508902 SDHAF3Q9NRP4 125 aa16.41■□□□□ 0.22
CLDND1-220ENST00000508902 MED17Q9NVC6 651 aa16.41■□□□□ 0.22
CLDND1-220ENST00000508902 SLC25A37Q9NYZ2 338 aa16.41■□□□□ 0.22
CLDND1-220ENST00000508902 CARD8Q9Y2G2 431 aa16.41■□□□□ 0.22
CLDND1-220ENST00000508902 DTNAQ9Y4J8 743 aa16.41■□□□□ 0.22
CLDND1-220ENST00000508902 ANKHD1Q8IWZ3 2542 aaKnown RBP16.4■□□□□ 0.22
CLDND1-220ENST00000508902 TRBV5-3A0A0A0MS03 114 aa16.4■□□□□ 0.22
CLDND1-220ENST00000508902 MBD3L4A6NDZ8 208 aaPredicted RBP16.4■□□□□ 0.22
CLDND1-220ENST00000508902 MBD3L3A6NE82 208 aaPredicted RBP16.4■□□□□ 0.22
CLDND1-220ENST00000508902 MBD3L5A6NJ08 208 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms