RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 JADE3Q92613 823 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 ZBTB8AQ96BR9 441 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 TRIM44Q96DX7 344 aaPredicted RBP11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 MARK4Q96L34 752 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 PPP3R2Q96LZ3 170 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 C3orf30Q96M34 536 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 MED18Q9BUE0 208 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 DUSP22Q9NRW4 184 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 ZCCHC3Q9NUD5 404 aaKnown RBP11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 MED17Q9NVC6 651 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 TLN2Q9Y4G6 2542 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 ZANQ9Y493 2812 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 A0A1W2PQD3 144 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 TMEM114B3SHH9 223 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 C16orf97H3BN30 126 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 LAMP1P11279 417 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 FOSL1P15407 271 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 MAPK1P28482 360 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 LCN1P31025 176 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 KCNJ5P48544 419 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 SERPINB4P48594 390 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 PRIM2P49643 509 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 ZNF41P51814 821 aaPredicted RBP11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 VSNL1P62760 191 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 LASP1Q14847 261 aaKnown RBP11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 SGCBQ16585 318 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 C22orf34Q6ZV56 151 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 ZNF550Q7Z398 422 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 MISPQ8IVT2 679 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 WDR75Q8IWA0 830 aaKnown RBP11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 ZNF610Q8N9Z0 462 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 POC1BQ8TC44 478 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 TCP10LQ8TDR4 215 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 NUDT8Q8WV74 236 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 CDS1Q92903 461 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 SH3YL1Q96HL8 342 aaPredicted RBP11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 GMPPAQ96IJ6 420 aaPredicted RBP11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 RNF145Q96MT1 663 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 STACQ99469 402 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 SLC39A3Q9BRY0 314 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 C1orf50Q9BV19 199 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 BTBD2Q9BX70 525 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 GSX1Q9H4S2 264 aaPredicted RBP11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 EML4Q9HC35 981 aaKnown RBP11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 HHATLQ9HCP6 504 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 NEUROD4Q9HD90 331 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 UBQLN4Q9NRR5 601 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 BEX4Q9NWD9 120 aaPredicted RBP11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 GIN1Q9NXP7 522 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 ZNF226Q9NYT6 803 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 CLEC4AQ9UMR7 237 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 PROCRQ9UNN8 238 aa11.66□□□□□ -0.54
HMGCS1-205ENST00000508319 DSCAMO60469 2012 aa11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 HEATR5AQ86XA9 2040 aa11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 SCDO00767 359 aa11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 TNFSF11O14788 317 aa11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 ADAMDEC1O15204 470 aa11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 SS18L1O75177 396 aaPredicted RBP11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 PEX11AO75192 247 aa11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 SKAP2O75563 359 aaPredicted RBP11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 HSPA4LO95757 839 aa11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 OPN1LWP04000 364 aa11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 LINGO3P0C6S8 592 aa11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 HPGDP15428 266 aa11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 HOXB4P17483 251 aaPredicted RBP11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 DDX5P17844 614 aaKnown RBP11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 LOXP28300 417 aaPredicted RBP11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 SERPINB5P36952 375 aa11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 RPL3P39023 403 aaKnown RBP11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 RAC1P63000 192 aa11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 POU6F2P78424 691 aaPredicted RBP11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 ZNF117Q03924 483 aa11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 ATP6AP1LQ52LC2 224 aa11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 C6orf136Q5SQH8 315 aa11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 PPP4R4Q6NUP7 873 aa11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 KRTCAP2Q8N6L1 136 aa11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 OR6K3Q8NGY3 331 aa11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 PIK3IP1Q96FE7 263 aa11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 HS3ST6Q96QI5 342 aa11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 PIGUQ9H490 435 aa11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 TMEM185BQ9H7F4 350 aa11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 CXorf36Q9H7Y0 433 aa11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 GPATCH2Q9NW75 528 aa11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 PAQR5Q9NXK6 330 aaPredicted RBP11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 STOML1Q9UBI4 398 aa11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 SNX8Q9Y5X2 465 aa11.65□□□□□ -0.54
HMGCS1-205ENST00000508319 A0A0J9YW62 118 aa11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 OIP5O43482 229 aa11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 CXCL13O43927 109 aa11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 LYPLA1O75608 230 aaPredicted RBP11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 SLU7O95391 586 aaKnown RBP11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 BPGMP07738 259 aa11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 NID1P14543 1247 aa11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 CREB1P16220 341 aa11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 IL11P20809 199 aa11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 ELK4P28324 431 aa11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 ETV4P43268 484 aa11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 IFFO1Q0D2I5 559 aa11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 FOXF1Q12946 379 aa11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 TP53BP2Q13625 1128 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms