RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 TLNRD1Q9H1K6 362 aa10.13□□□□□ -0.79
PDLIM5-210ENST00000508216 UBQLN3Q9H347 655 aa10.13□□□□□ -0.79
PDLIM5-210ENST00000508216 KRCC1Q9NPI7 259 aaPredicted RBP10.13□□□□□ -0.79
PDLIM5-210ENST00000508216 SAMD4AQ9UPU9 718 aaKnown RBP10.13□□□□□ -0.79
PDLIM5-210ENST00000508216 ZFP30Q9Y2G7 519 aa10.13□□□□□ -0.79
PDLIM5-210ENST00000508216 A0A096LPI6 279 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 TMEM269A0A1B0GVZ9 245 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 SIX3O95343 332 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 CLDN9O95484 217 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 IFNA21P01568 189 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 THP07101 528 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 CRYGCP07315 174 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 OR2T7P0C7T2 308 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 ERCC2P18074 760 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 HTR2CP28335 458 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 C21orf33P30042 268 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 OTX1P32242 354 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 ALDH3B1P43353 468 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 DGKEP52429 567 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 SELENOVP59797 346 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 SHC2P98077 582 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 NHLH1Q02575 133 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 HGFACQ04756 655 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 SMN1Q16637 294 aaKnown RBP10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 ATP6V1FQ16864 119 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 PCGF3Q3KNV8 242 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 SFRP5Q5T4F7 317 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 ZDHHC20Q5W0Z9 365 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 CNIH2Q6PI25 160 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 ERN2Q76MJ5 926 aaKnown RBP10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 DET1Q7L5Y6 550 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 UNC93AQ86WB7 457 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 CNTN4Q8IWV2 1026 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 CELF5Q8N6W0 485 aaKnown RBP10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 GNPDA2Q8TDQ7 276 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 TFAP2BQ92481 460 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 C14orf79Q96F83 325 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 PACRGQ96M98 296 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 ZNF48Q96MX3 618 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 CNTNAP3BQ96NU0 1288 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 TGM7Q96PF1 710 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 ZNF382Q96SR6 550 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 EGFL8Q99944 293 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 ZFYVE21Q9BQ24 234 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 DPH1Q9BZG8 443 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 NRSN2Q9GZP1 204 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 TKTL2Q9H0I9 626 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 MTG2Q9H4K7 406 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 CDCP1Q9H5V8 836 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 EML4Q9HC35 981 aaKnown RBP10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 CAPN10Q9HC96 672 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 HHATLQ9HCP6 504 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 NMRK2Q9NPI5 230 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 SDR39U1Q9NRG7 319 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 MAN2C1Q9NTJ4 1040 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 RBM22Q9NW64 420 aaKnown RBP eCLIP10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 FBXO34Q9NWN3 711 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 C2orf42Q9NWW7 574 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 SMPXQ9UHP9 88 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 MRPS2Q9Y399 296 aaKnown RBP10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 MICAL3Q7RTP6 2002 aa10.12□□□□□ -0.79
PDLIM5-210ENST00000508216 TEX13DA0A0J9YY54 714 aaPredicted RBP10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 A0A1B0GUH1 482 aa10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 ZNF587BE7ETH6 402 aa10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 ANHXE9PGG2 379 aa10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 MEIS2O14770 477 aa10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 FGF16O43320 207 aa10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 CYTIPO60759 359 aa10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 TFP02787 698 aa10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 VTNP04004 478 aa10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 SFTPBP07988 381 aa10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 NME1P15531 152 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 TBPP20226 339 aa10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 CD82P27701 267 aa10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 GPR4P46093 362 aa10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 BDKRB1P46663 353 aa10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 OR3A1P47881 315 aa10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 GTF2H2Q13888 395 aa10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 SHHQ15465 462 aa10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 NTRK2Q16620 822 aa10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 TSTQ16762 297 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 ZNF311Q5JNZ3 666 aa10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 CPZQ66K79 652 aa10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 KCTD11Q693B1 232 aa10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 EIF5AL1Q6IS14 154 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 GTF2H2CQ6P1K8 395 aa10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 ADGRA1Q86SQ6 560 aa10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 CYP4Z1Q86W10 505 aa10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 PARGQ86W56 976 aa10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 MRPS31Q92665 395 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 ARSGQ96EG1 525 aa10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 SMIM12Q96EX1 92 aa10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 GPR20Q99678 358 aa10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 MRPL57Q9BQC6 102 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 URM1Q9BTM9 101 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 POLR3FQ9H1D9 316 aaPredicted RBP10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 SNTG1Q9NSN8 517 aa10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 HAO2Q9NYQ3 351 aa10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 NCDNQ9UBB6 729 aa10.11□□□□□ -0.79
PDLIM5-210ENST00000508216 DNAJB11Q9UBS4 358 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms