RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 MTHFD2P13995 350 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 PCSK2P16519 638 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 ENPP1P22413 925 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 GABRB3P28472 473 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 RFX3P48380 749 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 HSPA7P48741 367 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 VPS41P49754 854 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 KHKP50053 298 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 PPOXP50336 477 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 MRPS35P82673 323 aaKnown RBP6.26□□□□□ -1.41
VCAN-207ENST00000507162 SARNPP82979 210 aaKnown RBP6.26□□□□□ -1.41
VCAN-207ENST00000507162 MORF4L2Q15014 288 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 ADRM1Q16186 407 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 TAF9Q16594 264 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 ZNF239Q16600 458 aaKnown RBP6.26□□□□□ -1.41
VCAN-207ENST00000507162 TMEM44Q2T9K0 475 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 CPTPQ5TA50 214 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 DCAF12L2Q5VW00 463 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 MRM1Q6IN84 353 aaKnown RBP6.26□□□□□ -1.41
VCAN-207ENST00000507162 MED27Q6P2C8 311 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 DOK3Q7L591 496 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 LMNTD2Q8IXW0 634 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 CCDC116Q8IYX3 515 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 LILRA2Q8N149 483 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 ATP6V1C2Q8NEY4 427 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 OR7G3Q8NG95 312 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 OR4M2Q8NGB6 313 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 RNF138Q8WVD3 245 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 SLC9A6Q92581 669 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 DVL3Q92997 716 aaPredicted RBP6.26□□□□□ -1.41
VCAN-207ENST00000507162 UBE2E3Q969T4 207 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 CPNE4Q96A23 557 aaPredicted RBP6.26□□□□□ -1.41
VCAN-207ENST00000507162 KLHL15Q96M94 604 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 C1orf147Q96MC9 270 aaPredicted RBP6.26□□□□□ -1.41
VCAN-207ENST00000507162 RNF145Q96MT1 663 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 WWC2-AS2Q96NR7 200 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 MTERF1Q99551 399 aaKnown RBP6.26□□□□□ -1.41
VCAN-207ENST00000507162 DNAJC7Q99615 494 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 CITED1Q99966 193 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 KCNS3Q9BQ31 491 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 FAM167BQ9BTA0 163 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 LRRC1Q9BTT6 524 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 KCNF1Q9H3M0 494 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 PLK3Q9H4B4 646 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 C7orf69Q9H7B7 122 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 CXorf36Q9H7Y0 433 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 ZMAT3Q9HA38 289 aaKnown RBP6.26□□□□□ -1.41
VCAN-207ENST00000507162 G6PC2Q9NQR9 355 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 MAT2BQ9NZL9 334 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 CTNNAL1Q9UBT7 734 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 TESQ9UGI8 421 aaKnown RBP6.26□□□□□ -1.41
VCAN-207ENST00000507162 ZNF639Q9UID6 485 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 FBXO9Q9UK97 447 aaPredicted RBP6.26□□□□□ -1.41
VCAN-207ENST00000507162 ICAM5Q9UMF0 924 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 VWA7Q9Y334 891 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 OARD1Q9Y530 152 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 MMP24Q9Y5R2 645 aa6.26□□□□□ -1.41
VCAN-207ENST00000507162 RYR2Q92736 4967 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 A0A0A6YYD5 115 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 A0A1B0GUS0 222 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 TAPBPO15533 448 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 PPIHO43447 177 aaKnown RBP6.25□□□□□ -1.41
VCAN-207ENST00000507162 PLPP2O43688 288 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 CCNT2O60583 730 aaKnown RBP6.25□□□□□ -1.41
VCAN-207ENST00000507162 STK16O75716 305 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 AHSGP02765 367 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 CRYBA1P05813 215 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 CT45A8P0DMV1 189 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 CT45A9P0DMV2 189 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 COX5AP20674 150 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 COL8A2P25067 703 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 BSGP35613 385 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 SLC1A3P43003 542 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 LMO4P61968 165 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 CDKL1Q00532 357 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 CSTF3Q12996 717 aaKnown RBP6.25□□□□□ -1.41
VCAN-207ENST00000507162 SLC9A3R2Q15599 337 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 ZNHIT3Q15649 155 aaPredicted RBP6.25□□□□□ -1.41
VCAN-207ENST00000507162 LTB4RQ15722 352 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 ADIPOQQ15848 244 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 PDK4Q16654 411 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 TMEM176BQ3YBM2 270 aaPredicted RBP6.25□□□□□ -1.41
VCAN-207ENST00000507162 CT45A2Q5DJT8 189 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 C9orf135Q5VTT2 229 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 RUSC1-AS1Q66K80 236 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 OLFML2AQ68BL7 652 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 ACSM5Q6NUN0 579 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 FAM180BQ6P0A1 224 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 C16orf87Q6PH81 154 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 GSTA5Q7RTV2 222 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 MYLK4Q86YV6 388 aaPredicted RBP6.25□□□□□ -1.41
VCAN-207ENST00000507162 BCL6BQ8N143 479 aaPredicted RBP6.25□□□□□ -1.41
VCAN-207ENST00000507162 SLC43A2Q8N370 569 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 WDR31Q8NA23 367 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 C2CD4AQ8NCU7 369 aaPredicted RBP6.25□□□□□ -1.41
VCAN-207ENST00000507162 WDR34Q96EX3 536 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 PDLIM5Q96HC4 596 aaKnown RBP6.25□□□□□ -1.41
VCAN-207ENST00000507162 ZNF300Q96RE9 604 aaPredicted RBP6.25□□□□□ -1.41
VCAN-207ENST00000507162 GPA33Q99795 319 aa6.25□□□□□ -1.41
VCAN-207ENST00000507162 MCMBPQ9BTE3 642 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms