RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 GPAT3Q53EU6 434 aa15.13■□□□□ 0.01
SNCA-209ENST00000506244 AGKQ53H12 422 aa15.13■□□□□ 0.01
SNCA-209ENST00000506244 KLHL26Q53HC5 615 aa15.13■□□□□ 0.01
SNCA-209ENST00000506244 LACC1Q8IV20 430 aa15.13■□□□□ 0.01
SNCA-209ENST00000506244 ZNF619Q8N2I2 560 aa15.13■□□□□ 0.01
SNCA-209ENST00000506244 B4GALNT2Q8NHY0 566 aa15.13■□□□□ 0.01
SNCA-209ENST00000506244 PNPT1Q8TCS8 783 aaKnown RBP15.13■□□□□ 0.01
SNCA-209ENST00000506244 GTF2H4Q92759 462 aa15.13■□□□□ 0.01
SNCA-209ENST00000506244 RAB8BQ92930 207 aa15.13■□□□□ 0.01
SNCA-209ENST00000506244 ROPN1LQ96C74 230 aa15.13■□□□□ 0.01
SNCA-209ENST00000506244 SDCCAG3Q96C92 435 aa15.13■□□□□ 0.01
SNCA-209ENST00000506244 WDYHV1Q96HA8 205 aa15.13■□□□□ 0.01
SNCA-209ENST00000506244 TRNT1Q96Q11 434 aaKnown RBP15.13■□□□□ 0.01
SNCA-209ENST00000506244 TTYH2Q9BSA4 534 aa15.13■□□□□ 0.01
SNCA-209ENST00000506244 TMEM120AQ9BXJ8 343 aa15.13■□□□□ 0.01
SNCA-209ENST00000506244 TPT1P8Q9HAU6 139 aa15.13■□□□□ 0.01
SNCA-209ENST00000506244 P2RX2Q9UBL9 471 aa15.13■□□□□ 0.01
SNCA-209ENST00000506244 HECTD1Q9ULT8 2610 aa15.13■□□□□ 0.01
SNCA-209ENST00000506244 FAM215AQ9Y5M1 114 aa15.13■□□□□ 0.01
SNCA-209ENST00000506244 FREM3P0C091 2139 aa15.13■□□□□ 0.01
SNCA-209ENST00000506244 FLNBO75369 2602 aaKnown RBP15.13■□□□□ 0.01
SNCA-209ENST00000506244 PHF3Q92576 2039 aaKnown RBP15.12■□□□□ 0.01
SNCA-209ENST00000506244 ICE1Q9Y2F5 2266 aa15.12■□□□□ 0.01
SNCA-209ENST00000506244 NPIPA5A0A0B4J1W7 369 aa15.12■□□□□ 0.01
SNCA-209ENST00000506244 B4DXG7 233 aa15.12■□□□□ 0.01
SNCA-209ENST00000506244 NPIPA7E9PJI5 369 aa15.12■□□□□ 0.01
SNCA-209ENST00000506244 GTPBP1O00178 669 aaKnown RBP15.12■□□□□ 0.01
SNCA-209ENST00000506244 ZIC3O60481 467 aa15.12■□□□□ 0.01
SNCA-209ENST00000506244 CLDN14O95500 239 aa15.12■□□□□ 0.01
SNCA-209ENST00000506244 CLDN1O95832 211 aa15.12■□□□□ 0.01
SNCA-209ENST00000506244 NPIPA8P0DM63 369 aa15.12■□□□□ 0.01
SNCA-209ENST00000506244 UBL4AP11441 157 aa15.12■□□□□ 0.01
SNCA-209ENST00000506244 PEPDP12955 493 aa15.12■□□□□ 0.01
SNCA-209ENST00000506244 POU3F2P20265 443 aaPredicted RBP15.12■□□□□ 0.01
SNCA-209ENST00000506244 TCEA1P23193 301 aaKnown RBP15.12■□□□□ 0.01
SNCA-209ENST00000506244 PPIBP23284 216 aaKnown RBP15.12■□□□□ 0.01
SNCA-209ENST00000506244 CHRNB4P30926 498 aa15.12■□□□□ 0.01
SNCA-209ENST00000506244 NUP107P57740 925 aa15.12■□□□□ 0.01
SNCA-209ENST00000506244 PMPCAQ10713 525 aa15.12■□□□□ 0.01
SNCA-209ENST00000506244 FADDQ13158 208 aa15.12■□□□□ 0.01
SNCA-209ENST00000506244 GNA13Q14344 377 aa15.12■□□□□ 0.01
SNCA-209ENST00000506244 CD226Q15762 336 aa15.12■□□□□ 0.01
SNCA-209ENST00000506244 BCL2A1Q16548 175 aa15.12■□□□□ 0.01
SNCA-209ENST00000506244 DCST1Q5T197 706 aa15.12■□□□□ 0.01
SNCA-209ENST00000506244 PDZK1Q5T2W1 519 aa15.12■□□□□ 0.01
SNCA-209ENST00000506244 SLC2A7Q6PXP3 512 aa15.12■□□□□ 0.01
SNCA-209ENST00000506244 FUNDC1Q8IVP5 155 aa15.12■□□□□ 0.01
SNCA-209ENST00000506244 MARVELD2Q8N4S9 558 aa15.12■□□□□ 0.01
SNCA-209ENST00000506244 TOR1AIP2Q8NFQ8 470 aa15.12■□□□□ 0.01
SNCA-209ENST00000506244 CA5BP1Q8WTZ4 195 aa15.12■□□□□ 0.01
SNCA-209ENST00000506244 PMM1Q92871 262 aa15.12■□□□□ 0.01
SNCA-209ENST00000506244 SH3YL1Q96HL8 342 aaPredicted RBP15.12■□□□□ 0.01
SNCA-209ENST00000506244 CALML5Q9NZT1 146 aa15.12■□□□□ 0.01
SNCA-209ENST00000506244 COL12A1Q99715 3063 aa15.11■□□□□ 0.01
SNCA-209ENST00000506244 C7orf72A4D263 438 aa15.11■□□□□ 0.01
SNCA-209ENST00000506244 SERINC4A6NH21 518 aa15.11■□□□□ 0.01
SNCA-209ENST00000506244 GMFGO60234 142 aa15.11■□□□□ 0.01
SNCA-209ENST00000506244 EIF4E2O60573 245 aaKnown RBP15.11■□□□□ 0.01
SNCA-209ENST00000506244 TNFRSF21O75509 655 aa15.11■□□□□ 0.01
SNCA-209ENST00000506244 NUDT14O95848 222 aa15.11■□□□□ 0.01
SNCA-209ENST00000506244 GLI4P10075 376 aa15.11■□□□□ 0.01
SNCA-209ENST00000506244 NR2F1P10589 423 aa15.11■□□□□ 0.01
SNCA-209ENST00000506244 CRATP43155 626 aa15.11■□□□□ 0.01
SNCA-209ENST00000506244 LHX2P50458 406 aa15.11■□□□□ 0.01
SNCA-209ENST00000506244 P2RX1P51575 399 aa15.11■□□□□ 0.01
SNCA-209ENST00000506244 ARFIP2P53365 341 aa15.11■□□□□ 0.01
SNCA-209ENST00000506244 EEFSECP57772 596 aaKnown RBP15.11■□□□□ 0.01
SNCA-209ENST00000506244 ZNF117Q03924 483 aa15.11■□□□□ 0.01
SNCA-209ENST00000506244 FUT5Q11128 374 aa15.11■□□□□ 0.01
SNCA-209ENST00000506244 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.11■□□□□ 0.01
SNCA-209ENST00000506244 LRIF1Q5T3J3 769 aa15.11■□□□□ 0.01
SNCA-209ENST00000506244 RIPPLY2Q5TAB7 128 aa15.11■□□□□ 0.01
SNCA-209ENST00000506244 RTL6Q6ICC9 239 aa15.11■□□□□ 0.01
SNCA-209ENST00000506244 TYW3Q6IPR3 259 aaKnown RBP15.11■□□□□ 0.01
SNCA-209ENST00000506244 NCCRP1Q6ZVX7 275 aaPredicted RBP15.11■□□□□ 0.01
SNCA-209ENST00000506244 EIF3MQ7L2H7 374 aaKnown RBP15.11■□□□□ 0.01
SNCA-209ENST00000506244 RPRMLQ8N4K4 120 aa15.11■□□□□ 0.01
SNCA-209ENST00000506244 MEIOBQ8N635 442 aa15.11■□□□□ 0.01
SNCA-209ENST00000506244 TMCO5AQ8N6Q1 288 aa15.11■□□□□ 0.01
SNCA-209ENST00000506244 OR10Q1Q8NGQ4 319 aa15.11■□□□□ 0.01
SNCA-209ENST00000506244 ZPLD1Q8TCW7 415 aa15.11■□□□□ 0.01
SNCA-209ENST00000506244 TSPEARQ8WU66 669 aa15.11■□□□□ 0.01
SNCA-209ENST00000506244 SAP130Q9H0E3 1048 aa15.11■□□□□ 0.01
SNCA-209ENST00000506244 CACYBPQ9HB71 228 aaKnown RBP15.11■□□□□ 0.01
SNCA-209ENST00000506244 SLC6A13Q9NSD5 602 aa15.11■□□□□ 0.01
SNCA-209ENST00000506244 LEF1Q9UJU2 399 aaPredicted RBP15.11■□□□□ 0.01
SNCA-209ENST00000506244 MKLN1Q9UL63 735 aa15.11■□□□□ 0.01
SNCA-209ENST00000506244 CORO2BQ9UQ03 480 aa15.11■□□□□ 0.01
SNCA-209ENST00000506244 VDAC3Q9Y277 283 aa15.11■□□□□ 0.01
SNCA-209ENST00000506244 SLC35A3Q9Y2D2 325 aa15.11■□□□□ 0.01
SNCA-209ENST00000506244 A0A1W2PP18 115 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 OR2M5A3KFT3 312 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 CD8B2A6NJW9 211 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 HSPB2A8KAH6 182 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 PRSS44E7EML9 344 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 ANGPT2O15123 496 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 ZNF264O43296 627 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 FCMRO60667 390 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 UGT2B17O75795 530 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 H6PDO95479 791 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms