RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 SSX5O60225 188 aa2.55□□□□□ -2
CHD1-203ENST00000505657 LYPLA1O75608 230 aaPredicted RBP2.55□□□□□ -2
CHD1-203ENST00000505657 CABYRO75952 493 aa2.55□□□□□ -2
CHD1-203ENST00000505657 SEMG1P04279 462 aa2.55□□□□□ -2
CHD1-203ENST00000505657 OR8U8P0C7N1 319 aa2.55□□□□□ -2
CHD1-203ENST00000505657 IGLL1P15814 213 aa2.55□□□□□ -2
CHD1-203ENST00000505657 HPDP32754 393 aaPredicted RBP2.55□□□□□ -2
CHD1-203ENST00000505657 RPL29P47914 159 aaKnown RBP2.55□□□□□ -2
CHD1-203ENST00000505657 CAMLGP49069 296 aa2.55□□□□□ -2
CHD1-203ENST00000505657 SLC26A2P50443 739 aa2.55□□□□□ -2
CHD1-203ENST00000505657 WNT4P56705 351 aa2.55□□□□□ -2
CHD1-203ENST00000505657 KRTAP10-1P60331 282 aa2.55□□□□□ -2
CHD1-203ENST00000505657 GMFBP60983 142 aa2.55□□□□□ -2
CHD1-203ENST00000505657 MRPS11P82912 194 aaKnown RBP2.55□□□□□ -2
CHD1-203ENST00000505657 OC90Q02509 493 aaPredicted RBP2.55□□□□□ -2
CHD1-203ENST00000505657 FAM74A3Q4VXF1 159 aa2.55□□□□□ -2
CHD1-203ENST00000505657 LANCL3Q6ZV70 420 aa2.55□□□□□ -2
CHD1-203ENST00000505657 VPS36Q86VN1 386 aa2.55□□□□□ -2
CHD1-203ENST00000505657 LINC01561Q8N1V8 128 aa2.55□□□□□ -2
CHD1-203ENST00000505657 CERS5Q8N5B7 392 aa2.55□□□□□ -2
CHD1-203ENST00000505657 BCORP1Q8N888 145 aa2.55□□□□□ -2
CHD1-203ENST00000505657 MRPL43Q8N983 215 aaKnown RBP2.55□□□□□ -2
CHD1-203ENST00000505657 ANKRD20A12PQ8NF67 263 aa2.55□□□□□ -2
CHD1-203ENST00000505657 TAF4BQ92750 862 aa2.55□□□□□ -2
CHD1-203ENST00000505657 VPS39Q96JC1 886 aa2.55□□□□□ -2
CHD1-203ENST00000505657 CNPY3Q9BT09 278 aa2.55□□□□□ -2
CHD1-203ENST00000505657 NFKBIZQ9BYH8 718 aa2.55□□□□□ -2
CHD1-203ENST00000505657 OR51J1Q9H342 316 aa2.55□□□□□ -2
CHD1-203ENST00000505657 COG4Q9H9E3 785 aa2.55□□□□□ -2
CHD1-203ENST00000505657 ACTR3BQ9P1U1 418 aa2.55□□□□□ -2
CHD1-203ENST00000505657 RIMS3Q9UJD0 308 aa2.55□□□□□ -2
CHD1-203ENST00000505657 SAMD4AQ9UPU9 718 aaKnown RBP2.55□□□□□ -2
CHD1-203ENST00000505657 NEU3Q9UQ49 428 aa2.55□□□□□ -2
CHD1-203ENST00000505657 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.55□□□□□ -2
CHD1-203ENST00000505657 GTF3C1Q12789 2109 aa2.54□□□□□ -2
CHD1-203ENST00000505657 CCDC7Q96M83 1385 aa2.54□□□□□ -2
CHD1-203ENST00000505657 ATP8B3O60423 1300 aa2.54□□□□□ -2
CHD1-203ENST00000505657 FAM230AA0A1W2PPH8 454 aa2.54□□□□□ -2
CHD1-203ENST00000505657 RGSL1A5PLK6 1076 aa2.54□□□□□ -2
CHD1-203ENST00000505657 RTL8CO15255 209 aa2.54□□□□□ -2
CHD1-203ENST00000505657 LANCL1O43813 399 aa2.54□□□□□ -2
CHD1-203ENST00000505657 TRIM3O75382 744 aaPredicted RBP2.54□□□□□ -2
CHD1-203ENST00000505657 STX11O75558 287 aa2.54□□□□□ -2
CHD1-203ENST00000505657 RRASP10301 218 aa2.54□□□□□ -2
CHD1-203ENST00000505657 BCKDHAP12694 445 aa2.54□□□□□ -2
CHD1-203ENST00000505657 IL10P22301 178 aa2.54□□□□□ -2
CHD1-203ENST00000505657 GNPDA1P46926 289 aa2.54□□□□□ -2
CHD1-203ENST00000505657 ZNF45Q02386 682 aa2.54□□□□□ -2
CHD1-203ENST00000505657 ELAVL3Q14576 367 aaKnown RBP2.54□□□□□ -2
CHD1-203ENST00000505657 AANATQ16613 207 aa2.54□□□□□ -2
CHD1-203ENST00000505657 OR8G2PQ6IF36 304 aa2.54□□□□□ -2
CHD1-203ENST00000505657 IRGCQ6NXR0 463 aa2.54□□□□□ -2
CHD1-203ENST00000505657 FAM43BQ6ZT52 329 aaPredicted RBP2.54□□□□□ -2
CHD1-203ENST00000505657 LHFPL4Q7Z7J7 247 aa2.54□□□□□ -2
CHD1-203ENST00000505657 C17orf82Q86X59 251 aaPredicted RBP2.54□□□□□ -2
CHD1-203ENST00000505657 SKA3Q8IX90 412 aa2.54□□□□□ -2
CHD1-203ENST00000505657 CNNM3Q8NE01 707 aa2.54□□□□□ -2
CHD1-203ENST00000505657 STKLD1Q8NE28 680 aa2.54□□□□□ -2
CHD1-203ENST00000505657 OR52B4Q8NGK2 314 aa2.54□□□□□ -2
CHD1-203ENST00000505657 RNF138Q8WVD3 245 aa2.54□□□□□ -2
CHD1-203ENST00000505657 NEIL2Q969S2 332 aa2.54□□□□□ -2
CHD1-203ENST00000505657 ELSPBP1Q96BH3 223 aa2.54□□□□□ -2
CHD1-203ENST00000505657 ZNF799Q96GE5 643 aa2.54□□□□□ -2
CHD1-203ENST00000505657 VSTM2LQ96N03 204 aa2.54□□□□□ -2
CHD1-203ENST00000505657 RAB17Q9H0T7 212 aa2.54□□□□□ -2
CHD1-203ENST00000505657 LIN28AQ9H9Z2 209 aaKnown RBP2.54□□□□□ -2
CHD1-203ENST00000505657 LPAR2Q9HBW0 351 aa2.54□□□□□ -2
CHD1-203ENST00000505657 NGBQ9NPG2 151 aa2.54□□□□□ -2
CHD1-203ENST00000505657 HPF1Q9NWY4 346 aa2.54□□□□□ -2
CHD1-203ENST00000505657 ARHGAP23Q9P227 1491 aa2.53□□□□□ -2
CHD1-203ENST00000505657 IGKV6D-21A0A0A0MT36 114 aa2.53□□□□□ -2
CHD1-203ENST00000505657 LOC100131303A0A0U1RQF7 123 aa2.53□□□□□ -2
CHD1-203ENST00000505657 ZNF705EA8MWA4 302 aaPredicted RBP2.53□□□□□ -2
CHD1-203ENST00000505657 RASGRF2O14827 1237 aa2.53□□□□□ -2
CHD1-203ENST00000505657 DUX1O43812 170 aa2.53□□□□□ -2
CHD1-203ENST00000505657 TOM1L1O75674 476 aa2.53□□□□□ -2
CHD1-203ENST00000505657 KRTAP5-8O75690 187 aa2.53□□□□□ -2
CHD1-203ENST00000505657 CHRNA1P02708 482 aa2.53□□□□□ -2
CHD1-203ENST00000505657 PRB2P02812 416 aaPredicted RBP2.53□□□□□ -2
CHD1-203ENST00000505657 PTMAP06454 111 aaKnown RBP2.53□□□□□ -2
CHD1-203ENST00000505657 DESP17661 470 aa2.53□□□□□ -2
CHD1-203ENST00000505657 DHPSP49366 369 aaPredicted RBP2.53□□□□□ -2
CHD1-203ENST00000505657 ZNF630Q2M218 657 aaPredicted RBP2.53□□□□□ -2
CHD1-203ENST00000505657 DCST2Q5T1A1 773 aa2.53□□□□□ -2
CHD1-203ENST00000505657 METTL11BQ5VVY1 283 aa2.53□□□□□ -2
CHD1-203ENST00000505657 RBM43Q6ZSC3 357 aaKnown RBP2.53□□□□□ -2
CHD1-203ENST00000505657 ZNF589Q86UQ0 364 aaPredicted RBP2.53□□□□□ -2
CHD1-203ENST00000505657 ZSCAN4Q8NAM6 433 aaPredicted RBP2.53□□□□□ -2
CHD1-203ENST00000505657 ZBTB44Q8NCP5 570 aa2.53□□□□□ -2
CHD1-203ENST00000505657 CNIH3Q8TBE1 160 aa2.53□□□□□ -2
CHD1-203ENST00000505657 C14orf79Q96F83 325 aa2.53□□□□□ -2
CHD1-203ENST00000505657 NICN1Q9BSH3 213 aa2.53□□□□□ -2
CHD1-203ENST00000505657 TBCDQ9BTW9 1192 aa2.53□□□□□ -2
CHD1-203ENST00000505657 RNF126Q9BV68 326 aa2.53□□□□□ -2
CHD1-203ENST00000505657 CHIAQ9BZP6 476 aa2.53□□□□□ -2
CHD1-203ENST00000505657 RWDD1Q9H446 243 aaPredicted RBP2.53□□□□□ -2
CHD1-203ENST00000505657 RHOJQ9H4E5 214 aa2.53□□□□□ -2
CHD1-203ENST00000505657 GLIPR2Q9H4G4 154 aa2.53□□□□□ -2
CHD1-203ENST00000505657 FANCFQ9NPI8 374 aa2.53□□□□□ -2
CHD1-203ENST00000505657 AGPAT5Q9NUQ2 364 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms