RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 REM1O75628 298 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 PRSS23O95084 383 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 THY1P04216 161 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 THBS1P07996 1170 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 LINGO3P0C6S8 592 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 PABPC4LP0CB38 370 aaKnown RBP4.5□□□□□ -1.69
LMNB1-208ENST00000504788 HNRNPCL4P0DMR1 293 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 CNR1P21554 472 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 KCNJ5P48544 419 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 TMED10P49755 219 aaKnown RBP4.5□□□□□ -1.69
LMNB1-208ENST00000504788 CRISP3P54108 245 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 NRG3P56975 720 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 B3GALT5-AS1P59052 145 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 GPR85P60893 370 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 PMP22Q01453 160 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 ZNF117Q03924 483 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 SCARB2Q14108 478 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 ZNF169Q14929 603 aaPredicted RBP4.5□□□□□ -1.69
LMNB1-208ENST00000504788 ZNHIT3Q15649 155 aaPredicted RBP4.5□□□□□ -1.69
LMNB1-208ENST00000504788 NPTX1Q15818 432 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 ZNF630Q2M218 657 aaPredicted RBP4.5□□□□□ -1.69
LMNB1-208ENST00000504788 NDUFAF6Q330K2 333 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 SPATS1Q496A3 300 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 FLYWCH1Q4VC44 716 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 PRR30Q53SZ7 412 aaPredicted RBP4.5□□□□□ -1.69
LMNB1-208ENST00000504788 CMPK2Q5EBM0 449 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 ZNF766Q5HY98 468 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 PDZK1Q5T2W1 519 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 PRAMEF20Q5VT98 475 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 RNF220Q5VTB9 566 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 HLA-DQA1Q5Y7H0 255 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 TIGD3Q6B0B8 471 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 REEP3Q6NUK4 255 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 ZNF836Q6ZNA1 936 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 FGD2Q7Z6J4 655 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 YTHDF3Q7Z739 585 aaKnown RBP4.5□□□□□ -1.69
LMNB1-208ENST00000504788 MARCH3Q86UD3 253 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 VRK2Q86Y07 508 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 LACC1Q8IV20 430 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 MICU2Q8IYU8 434 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 TMEM156Q8N614 296 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 FAM86B1Q8N7N1 296 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 C11orf65Q8NCR3 313 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 HIPK4Q8NE63 616 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 OR2T12Q8NG77 320 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 NFKBIDQ8NI38 313 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 CDRT15Q96T59 188 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 SLX1AQ9BQ83 275 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 BTBD10Q9BSF8 475 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 G6PC3Q9BUM1 346 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 THUMPD3Q9BV44 507 aaKnown RBP4.5□□□□□ -1.69
LMNB1-208ENST00000504788 PCDHAC1Q9H158 963 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 GORASP2Q9H8Y8 452 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 MTHFD2LQ9H903 347 aaPredicted RBP4.5□□□□□ -1.69
LMNB1-208ENST00000504788 NPDC1Q9NQX5 325 aaPredicted RBP4.5□□□□□ -1.69
LMNB1-208ENST00000504788 EXD2Q9NVH0 621 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 RLIMQ9NVW2 624 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 HPF1Q9NWY4 346 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 THUMPD1Q9NXG2 353 aaKnown RBP4.5□□□□□ -1.69
LMNB1-208ENST00000504788 DNAJB12Q9NXW2 375 aaKnown RBP4.5□□□□□ -1.69
LMNB1-208ENST00000504788 P2RX2Q9UBL9 471 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.5□□□□□ -1.69
LMNB1-208ENST00000504788 SLC7A8Q9UHI5 535 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 CORO2BQ9UQ03 480 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 OR10H1Q9Y4A9 318 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 DTNAQ9Y4J8 743 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.5□□□□□ -1.69
LMNB1-208ENST00000504788 ARHGAP21Q5T5U3 1957 aa4.5□□□□□ -1.69
LMNB1-208ENST00000504788 TENM4Q6N022 2769 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 TRAV17A0A0B4J275 112 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 ELOVL7A1L3X0 281 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 SERINC4A6NH21 518 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 EVPLLA8MZ36 301 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 G3V3Y1 287 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 M0QX08 132 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 FAAHO00519 579 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 PEX1O43933 1283 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 SNX4O95219 450 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 LYPD3O95274 346 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 ANGPTL1O95841 491 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 IGHG3P01860 377 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 HPNP05981 417 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 CELA3AP09093 270 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 PRG2P13727 222 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 ATP6V1B2P21281 511 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 KDELR2P33947 212 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 MNAT1P51948 309 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 GFRA1P56159 465 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 CLDN15P56746 228 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 KCNJ10P78508 379 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 ARG2P78540 354 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 EFR3AQ14156 821 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 TRIM25Q14258 630 aaKnown RBP4.49□□□□□ -1.69
LMNB1-208ENST00000504788 GPR68Q15743 365 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 TOMM34Q15785 309 aaPredicted RBP4.49□□□□□ -1.69
LMNB1-208ENST00000504788 NRF1Q16656 503 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 SLC25A53Q5H9E4 307 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 COLEC12Q5KU26 742 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 GCNT6Q5T4J0 391 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 MRPL2Q5T653 305 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms