RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 MSX1P28360 303 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 ADH7P40394 386 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 MAGEA5P43359 124 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 CRISP3P54108 245 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 MTPNP58546 118 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 RBBP4Q09028 425 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 ART3Q13508 389 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 SLC10A1Q14973 349 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 ADRM1Q16186 407 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 CMPK2Q5EBM0 449 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 C8orf82Q6P1X6 216 aaPredicted RBP10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 NET1Q7Z628 596 aaPredicted RBP10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 ARPINQ7Z6K5 226 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 ZNF605Q86T29 641 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 SERPINA11Q86U17 422 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 FADS6Q8N9I5 356 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 DUSP19Q8WTR2 217 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 MAL2Q969L2 176 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 MIB2Q96AX9 1013 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 ZG16BQ96DA0 208 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 DTNBP1Q96EV8 351 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 GPR137Q96N19 417 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 HOPXQ9BPY8 73 aaPredicted RBP10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 TREX2Q9BQ50 279 aaPredicted RBP10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 GPATCH1Q9BRR8 931 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 SPATA9Q9BWV2 254 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 TRIM8Q9BZR9 551 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 UBQLN3Q9H347 655 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 RUBCNLQ9H714 662 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 ZNF703Q9H7S9 590 aaPredicted RBP10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 ACKR4Q9NPB9 350 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 ARL8BQ9NVJ2 186 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 PPP4R1LQ9P1A2 415 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 TAGLN3Q9UI15 199 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 KCNE5Q9UJ90 142 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 AP3M1Q9Y2T2 418 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 MRPS18CQ9Y3D5 142 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 HRH3Q9Y5N1 445 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 DOCK7Q96N67 2140 aa10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 SPENQ96T58 3664 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-208ENST00000504489 DSPPQ9NZW4 1301 aa10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 SERINC4A6NH21 518 aa10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 AGAP5A6NIR3 686 aa10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 FAM166BA8MTA8 275 aa10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 B4DXG7 233 aa10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 NPIPA5E9PKD4 350 aa10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 WISP2O76076 250 aa10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 PGM3O95394 542 aa10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 IGHG3P01860 377 aa10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 RPS4Y1P22090 263 aaKnown RBP10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 SLC6A2P23975 617 aa10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 GDF1P27539 372 aa10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 NUDT2P50583 147 aa10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 GZMMP51124 257 aa10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 CDK6Q00534 326 aa10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 FGFBP1Q14512 234 aa10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 MAPK14Q16539 360 aa10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 ZNF630Q2M218 657 aaPredicted RBP10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 RABL3Q5HYI8 236 aa10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 PDZK1Q5T2W1 519 aa10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 OR5M10Q6IEU7 315 aa10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 PTOV1Q86YD1 416 aa10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 C11orf65Q8NCR3 313 aa10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 GALNT11Q8NCW6 608 aa10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 ST6GALNAC3Q8NDV1 305 aa10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 OR2M3Q8NG83 312 aa10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 OR10A6Q8NH74 314 aa10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 PHOSPHO1Q8TCT1 267 aa10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 TMEM19Q96HH6 336 aa10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 ECSITQ9BQ95 431 aa10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 NPIPA1Q9UND3 350 aa10.84□□□□□ -0.67
PDLIM5-208ENST00000504489 CENPVL1A0A0U1RR11 272 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 C17orf51A8MQB3 221 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 C5orf58C9J3I9 102 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 GTPBP1O00178 669 aaKnown RBP10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 SUSD5O60279 629 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 HCN1O60741 890 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 CBX6O95503 412 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 HPNP05981 417 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 DBIP07108 87 aaKnown RBP10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 ETS2P15036 469 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 SRD5A2P31213 254 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 MNAT1P51948 309 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 DSCR4P56555 118 aaPredicted RBP10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 SCARB2Q14108 478 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 CD226Q15762 336 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 CYP51A1Q16850 503 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 REEP3Q6NUK4 255 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 CALHM3Q86XJ0 350 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 SLC30A8Q8IWU4 369 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 PEX5LQ8IYB4 626 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 GHDCQ8N2G8 530 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 ZNF614Q8N883 585 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 HIPK4Q8NE63 616 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 OR4K17Q8NGC6 315 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 NFKBIDQ8NI38 313 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 BBS10Q8TAM1 723 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 NSL1Q96IY1 281 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 OR2B2Q9GZK3 357 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 QRSL1Q9H0R6 528 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms