RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, human

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-208	ENST00000498325	TMEM150C	B9EJG8	249 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325		I3L1I5	382 aa	Predicted RBP	4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325		M0QX08	132 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PLOD2	O00469	737 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ASNA1	O43681	348 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	RDH16	O75452	317 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PRKRA	O75569	313 aa	Known RBP	4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SERPINB7	O75635	380 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	OR2B3	O76000	313 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	HMGN2	P05204	90 aa	Known RBP	4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	FABP3	P05413	133 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ZNF883	P0CG24	379 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SLC35E2	P0CK97	266 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	RNF224	P0DH78	156 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	HNRNPCL4	P0DMR1	293 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	OR12D1	P0DN82	309 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	NR2F1	P10589	423 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	UQCRB	P14927	111 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ITGA2	P17301	1181 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	NELFE	P18615	380 aa	Known RBP	4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	NT5E	P21589	574 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PEX2	P28328	305 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CASP9	P55211	416 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	OLR1	P78380	273 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ACY1	Q03154	408 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	STX4	Q12846	297 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SLC13A2	Q13183	592 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	MED21	Q13503	144 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ADRM1	Q16186	407 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	IFI44L	Q53G44	452 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CYBRD1	Q53TN4	286 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ATAD3B	Q5T9A4	648 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	HES3	Q5TGS1	186 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PRAMEF8	Q5VWM4	474 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PRAMEF7	Q5VXH5	474 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	HMBOX1	Q6NT76	420 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PPP4R4	Q6NUP7	873 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ZCCHC12	Q6PEW1	402 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ENPP6	Q6UWR7	440 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TMEM107	Q6UX40	140 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	KRT73	Q86Y46	540 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ARMC8	Q8IUR7	673 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ZDHHC21	Q8IVQ6	265 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	C10orf111	Q8N326	155 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SVOPL	Q8N434	492 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	GALNT4	Q8N4A0	578 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	HORMAD2	Q8N7B1	307 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	NFKBID	Q8NI38	313 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	BBS10	Q8TAM1	723 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SUN3	Q8TAQ9	357 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	MIPOL1	Q8TD10	442 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ADAMTS15	Q8TE58	950 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	XAGE5	Q8WWM1	108 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ITFG2	Q969R8	447 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TBC1D20	Q96BZ9	403 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	MMAB	Q96EY8	250 aa	Predicted RBP	4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	RBM18	Q96H35	190 aa	Known RBP	4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TPD52L3	Q96J77	140 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	VPS50	Q96JG6	964 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	MAGED4	Q96JG8	741 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SLC41A2	Q96JW4	573 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	DEPDC7	Q96QD5	511 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CIB1	Q99828	191 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PELO	Q9BRX2	385 aa	Known RBP	4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	NDC1	Q9BTX1	674 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	DOHH	Q9BU89	302 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	OSBPL10	Q9BXB5	764 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ACTRT3	Q9BYD9	372 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SLC7A5P2	Q9GIP4	190 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SPRTN	Q9H040	489 aa	Predicted RBP	4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	OR51I1	Q9H343	314 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	NELFA	Q9H3P2	528 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	LRRN3	Q9H3W5	708 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	COQ10B	Q9H8M1	238 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CACYBP	Q9HB71	228 aa	Known RBP	4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	A4GALT	Q9NPC4	353 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	IL1RAP	Q9NPH3	570 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PRTFDC1	Q9NRG1	225 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CUTC	Q9NTM9	273 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	EXD2	Q9NVH0	621 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	DDX18	Q9NVP1	670 aa	Known RBP	4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	P2RX2	Q9UBL9	471 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	NDOR1	Q9UHB4	597 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	RAB26	Q9ULW5	256 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	LIPT1	Q9Y234	373 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	MRPS2	Q9Y399	296 aa	Known RBP	4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PCDHGB3	Q9Y5G1	929 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PCDHGB2	Q9Y5G2	931 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325		V9GYQ6	96 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	AHCTF1	Q8WYP5	2266 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SNRNP200	O75643	2136 aa	Known RBP	4.91	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SMIM31	A0A1B0GVY4	71 aa		4.91	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SAC3D1	A6NKF1	404 aa		4.91	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TTC36	A6NLP5	189 aa		4.91	□□□□□ -1.62
HMGXB4-208	ENST00000498325	FAM227A	F5H4B4	570 aa		4.91	□□□□□ -1.62
HMGXB4-208	ENST00000498325		G3V2T6	193 aa		4.91	□□□□□ -1.62
HMGXB4-208	ENST00000498325	HMGN4	O00479	90 aa		4.91	□□□□□ -1.62
HMGXB4-208	ENST00000498325	DSCR3	O14972	297 aa		4.91	□□□□□ -1.62
HMGXB4-208	ENST00000498325	HCRTR1	O43613	425 aa		4.91	□□□□□ -1.62

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