RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 SHBQ15464 509 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 VWA2Q5GFL6 755 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 CCNJQ5T5M9 372 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 DGLUCYQ7Z3D6 616 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 ANKRD37Q7Z713 158 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 CHERPQ8IWX8 916 aaKnown RBP7.75□□□□□ -1.17
USP54-215ENST00000497106 FAM86B1Q8N7N1 296 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 NUBPLQ8TB37 319 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 LIN37Q96GY3 246 aaPredicted RBP7.75□□□□□ -1.17
USP54-215ENST00000497106 CTRCQ99895 268 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 TVP23BQ9NYZ1 205 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 AK5Q9Y6K8 562 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 SH3PXD2BA1X283 911 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 GJE1A6NN92 205 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 TPPPO94811 219 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 RENP00797 406 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 HK1P19367 917 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 CCNA2P20248 432 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 TNFRSF1BP20333 461 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 PTGER1P34995 402 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 SSR4P51571 173 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 C17orf67Q0P5P2 114 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 TUBA3CQ13748 450 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 TRIP6Q15654 476 aaKnown RBP7.75□□□□□ -1.17
USP54-215ENST00000497106 C6orf141Q5SZD1 244 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 PODNL1Q6PEZ8 512 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 TMPRSS11AQ6ZMR5 421 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 OMA1Q96E52 524 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 C5orf34Q96MH7 638 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 TUBA1CQ9BQE3 449 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 SLC19A3Q9BZV2 496 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 WWTR1Q9GZV5 400 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 FSCN3Q9NQT6 498 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 TMEM9Q9P0T7 183 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 COL4A2P08572 1712 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 SPAG17Q6Q759 2223 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 C21orf140B9A014 251 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 C4orf51C9J302 202 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 SCO2O43819 266 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 OR2T1O43869 369 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 CDC40O60508 579 aaKnown RBP eCLIP7.75□□□□□ -1.17
USP54-215ENST00000497106 FPR3P25089 353 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 HLCSP50747 726 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 MVDP53602 400 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 PPP2R2BQ00005 443 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 FGFBP1Q14512 234 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 ZNF141Q15928 474 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 FAM69BQ5VUD6 431 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 ZNF691Q5VV52 312 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 PWWP2BQ6NUJ5 590 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 DNM1P34Q6PK57 102 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 RASSF6Q6ZTQ3 369 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 DIO2Q92813 273 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 EFHD2Q96C19 240 aaPredicted RBP7.75□□□□□ -1.17
USP54-215ENST00000497106 PPP1R14BQ96C90 147 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 DDIT4LQ96D03 193 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 C7orf34Q96L11 122 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 MUS81Q96NY9 551 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 ADOQ96SZ5 270 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 PSD2Q9BQI7 771 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 GABARAPL3Q9BY60 117 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 GRIP2Q9C0E4 1043 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 RASSF1Q9NS23 344 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 DKKL1Q9UK85 242 aa7.75□□□□□ -1.17
USP54-215ENST00000497106 GPR55Q9Y2T6 319 aaPredicted RBP7.75□□□□□ -1.17
USP54-215ENST00000497106 A0A1W2PQM1 296 aa7.74□□□□□ -1.17
USP54-215ENST00000497106 TLX3O43711 291 aaPredicted RBP7.74□□□□□ -1.17
USP54-215ENST00000497106 RAB40ALP0C0E4 278 aa7.74□□□□□ -1.17
USP54-215ENST00000497106 ACVR2AP27037 513 aa7.74□□□□□ -1.17
USP54-215ENST00000497106 POU4F2Q12837 409 aa7.74□□□□□ -1.17
USP54-215ENST00000497106 GINS1Q14691 196 aa7.74□□□□□ -1.17
USP54-215ENST00000497106 NEDD8Q15843 81 aa7.74□□□□□ -1.17
USP54-215ENST00000497106 NKG7Q16617 165 aa7.74□□□□□ -1.17
USP54-215ENST00000497106 DUSP7Q16829 419 aa7.74□□□□□ -1.17
USP54-215ENST00000497106 ABHD17BQ5VST6 288 aa7.74□□□□□ -1.17
USP54-215ENST00000497106 NDUFAF7Q7L592 441 aa7.74□□□□□ -1.17
USP54-215ENST00000497106 GPALPP1Q8IXQ4 340 aa7.74□□□□□ -1.17
USP54-215ENST00000497106 OR2I1PQ8NGU4 316 aa7.74□□□□□ -1.17
USP54-215ENST00000497106 DOK4Q8TEW6 326 aa7.74□□□□□ -1.17
USP54-215ENST00000497106 COPS4Q9BT78 406 aa7.74□□□□□ -1.17
USP54-215ENST00000497106 GPR87Q9BY21 358 aa7.74□□□□□ -1.17
USP54-215ENST00000497106 EXOSC3Q9NQT5 275 aaKnown RBP7.74□□□□□ -1.17
USP54-215ENST00000497106 FARSAQ9Y285 508 aaKnown RBP7.74□□□□□ -1.17
USP54-215ENST00000497106 GXYLT2A0PJZ3 443 aa7.74□□□□□ -1.17
USP54-215ENST00000497106 EIF4E1BA6NMX2 242 aaKnown RBP7.74□□□□□ -1.17
USP54-215ENST00000497106 STK17BO94768 372 aa7.74□□□□□ -1.17
USP54-215ENST00000497106 TBXA2RP21731 343 aa7.74□□□□□ -1.17
USP54-215ENST00000497106 GABRA4P48169 554 aa7.74□□□□□ -1.17
USP54-215ENST00000497106 NHSL2Q5HYW2 709 aa7.74□□□□□ -1.17
USP54-215ENST00000497106 FAHD1Q6P587 224 aa7.74□□□□□ -1.17
USP54-215ENST00000497106 MAMDC2Q7Z304 686 aaPredicted RBP7.74□□□□□ -1.17
USP54-215ENST00000497106 OAFQ86UD1 273 aa7.74□□□□□ -1.17
USP54-215ENST00000497106 NRMQ8IXM6 262 aa7.74□□□□□ -1.17
USP54-215ENST00000497106 NLGN4XQ8N0W4 816 aa7.74□□□□□ -1.17
USP54-215ENST00000497106 GALNT6Q8NCL4 622 aa7.74□□□□□ -1.17
USP54-215ENST00000497106 NLGN4YQ8NFZ3 816 aaPredicted RBP7.74□□□□□ -1.17
USP54-215ENST00000497106 OR6T1Q8NGN1 323 aa7.74□□□□□ -1.17
USP54-215ENST00000497106 MOSPD2Q8NHP6 518 aa7.74□□□□□ -1.17
USP54-215ENST00000497106 NACC2Q96BF6 587 aa7.74□□□□□ -1.17
USP54-215ENST00000497106 VSTM2LQ96N03 204 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms