RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 SLC5A2P31639 672 aa15.09■□□□□ 0.01
HLA-A-208ENST00000496081 NR1H2P55055 460 aa15.09■□□□□ 0.01
HLA-A-208ENST00000496081 SPEM2Q0P670 501 aa15.09■□□□□ 0.01
HLA-A-208ENST00000496081 ILKQ13418 452 aa15.09■□□□□ 0.01
HLA-A-208ENST00000496081 FOXB2Q5VYV0 432 aa15.09■□□□□ 0.01
HLA-A-208ENST00000496081 HLA-DQA1Q5Y7H0 255 aa15.09■□□□□ 0.01
HLA-A-208ENST00000496081 FAM199XQ6PEV8 388 aaPredicted RBP15.09■□□□□ 0.01
HLA-A-208ENST00000496081 ZNF730Q6ZMV8 503 aa15.09■□□□□ 0.01
HLA-A-208ENST00000496081 PRICKLE2Q7Z3G6 844 aa15.09■□□□□ 0.01
HLA-A-208ENST00000496081 SATL1Q86VE3 508 aa15.09■□□□□ 0.01
HLA-A-208ENST00000496081 NFAM1Q8NET5 270 aaPredicted RBP15.09■□□□□ 0.01
HLA-A-208ENST00000496081 TOR1AIP2Q8NFQ8 470 aa15.09■□□□□ 0.01
HLA-A-208ENST00000496081 LRFN5Q96NI6 719 aa15.09■□□□□ 0.01
HLA-A-208ENST00000496081 CMKLR1Q99788 373 aa15.09■□□□□ 0.01
HLA-A-208ENST00000496081 PRSS27Q9BQR3 290 aa15.09■□□□□ 0.01
HLA-A-208ENST00000496081 IRF2BPLQ9H1B7 796 aa15.09■□□□□ 0.01
HLA-A-208ENST00000496081 TMEM9BQ9NQ34 198 aa15.09■□□□□ 0.01
HLA-A-208ENST00000496081 RASSF1Q9NS23 344 aa15.09■□□□□ 0.01
HLA-A-208ENST00000496081 SLC39A1Q9NY26 324 aa15.09■□□□□ 0.01
HLA-A-208ENST00000496081 FLRT3Q9NZU0 649 aa15.09■□□□□ 0.01
HLA-A-208ENST00000496081 RNF6Q9Y252 685 aa15.09■□□□□ 0.01
HLA-A-208ENST00000496081 CDC14CA4D256 554 aa15.08■□□□□ 0.01
HLA-A-208ENST00000496081 SERINC4A6NH21 518 aa15.08■□□□□ 0.01
HLA-A-208ENST00000496081 ZAR1LA6NP61 321 aa15.08■□□□□ 0.01
HLA-A-208ENST00000496081 B4E171 279 aa15.08■□□□□ 0.01
HLA-A-208ENST00000496081 SLC1A7O00341 560 aa15.08■□□□□ 0.01
HLA-A-208ENST00000496081 LYPD3O95274 346 aa15.08■□□□□ 0.01
HLA-A-208ENST00000496081 SOX14O95416 240 aa15.08■□□□□ 0.01
HLA-A-208ENST00000496081 ANGPTL1O95841 491 aa15.08■□□□□ 0.01
HLA-A-208ENST00000496081 IGFBP1P08833 259 aaPredicted RBP15.08■□□□□ 0.01
HLA-A-208ENST00000496081 ITIH1P19827 911 aa15.08■□□□□ 0.01
HLA-A-208ENST00000496081 POU1F1P28069 291 aa15.08■□□□□ 0.01
HLA-A-208ENST00000496081 TSPAN7P41732 249 aa15.08■□□□□ 0.01
HLA-A-208ENST00000496081 ACAA2P42765 397 aaKnown RBP15.08■□□□□ 0.01
HLA-A-208ENST00000496081 IDH2P48735 452 aaKnown RBP15.08■□□□□ 0.01
HLA-A-208ENST00000496081 NR0B1P51843 470 aaKnown RBP15.08■□□□□ 0.01
HLA-A-208ENST00000496081 COX10Q12887 443 aa15.08■□□□□ 0.01
HLA-A-208ENST00000496081 TOP3AQ13472 1001 aaPredicted RBP15.08■□□□□ 0.01
HLA-A-208ENST00000496081 ZSWIM7Q19AV6 140 aa15.08■□□□□ 0.01
HLA-A-208ENST00000496081 KLHL26Q53HC5 615 aa15.08■□□□□ 0.01
HLA-A-208ENST00000496081 TMEM236Q5W0B7 351 aa15.08■□□□□ 0.01
HLA-A-208ENST00000496081 SLC29A4Q7RTT9 530 aa15.08■□□□□ 0.01
HLA-A-208ENST00000496081 APLFQ8IW19 511 aaPredicted RBP15.08■□□□□ 0.01
HLA-A-208ENST00000496081 CMIPQ8IY22 773 aa15.08■□□□□ 0.01
HLA-A-208ENST00000496081 PRR22Q8IZ63 422 aa15.08■□□□□ 0.01
HLA-A-208ENST00000496081 ZNF441Q8N8Z8 693 aa15.08■□□□□ 0.01
HLA-A-208ENST00000496081 BPIFB6Q8NFQ5 453 aa15.08■□□□□ 0.01
HLA-A-208ENST00000496081 FAM81AQ8TBF8 368 aa15.08■□□□□ 0.01
HLA-A-208ENST00000496081 TMEM255BQ8WV15 326 aa15.08■□□□□ 0.01
HLA-A-208ENST00000496081 ZNF566Q969W8 418 aa15.08■□□□□ 0.01
HLA-A-208ENST00000496081 ZNF559Q9BR84 538 aa15.08■□□□□ 0.01
HLA-A-208ENST00000496081 CRB3Q9BUF7 120 aa15.08■□□□□ 0.01
HLA-A-208ENST00000496081 ULBP3Q9BZM4 244 aa15.08■□□□□ 0.01
HLA-A-208ENST00000496081 UBQLN4Q9NRR5 601 aa15.08■□□□□ 0.01
HLA-A-208ENST00000496081 SAGE2PA6NJ88 616 aa15.08■□□□□ 0
HLA-A-208ENST00000496081 TO15178 435 aa15.08■□□□□ 0
HLA-A-208ENST00000496081 WBP4O75554 376 aaKnown RBP15.08■□□□□ 0
HLA-A-208ENST00000496081 KLK3P07288 261 aaPredicted RBP15.08■□□□□ 0
HLA-A-208ENST00000496081 CCDC159P0C7I6 412 aa15.08■□□□□ 0
HLA-A-208ENST00000496081 EEF1B2P24534 225 aaKnown RBP15.08■□□□□ 0
HLA-A-208ENST00000496081 FMO3P31513 532 aa15.08■□□□□ 0
HLA-A-208ENST00000496081 IFNGR2P38484 337 aa15.08■□□□□ 0
HLA-A-208ENST00000496081 NBL1P41271 181 aa15.08■□□□□ 0
HLA-A-208ENST00000496081 NADK2Q4G0N4 442 aa15.08■□□□□ 0
HLA-A-208ENST00000496081 RRM2BQ7LG56 351 aa15.08■□□□□ 0
HLA-A-208ENST00000496081 SLCO6A1Q86UG4 719 aa15.08■□□□□ 0
HLA-A-208ENST00000496081 MEX3DQ86XN8 651 aaKnown RBP15.08■□□□□ 0
HLA-A-208ENST00000496081 APCDD1LQ8NCL9 501 aa15.08■□□□□ 0
HLA-A-208ENST00000496081 B3GNT7Q8NFL0 401 aa15.08■□□□□ 0
HLA-A-208ENST00000496081 GNPDA2Q8TDQ7 276 aa15.08■□□□□ 0
HLA-A-208ENST00000496081 APH1BQ8WW43 257 aa15.08■□□□□ 0
HLA-A-208ENST00000496081 SGCDQ92629 289 aa15.08■□□□□ 0
HLA-A-208ENST00000496081 SLC35B4Q969S0 331 aa15.08■□□□□ 0
HLA-A-208ENST00000496081 PHOX2BQ99453 314 aa15.08■□□□□ 0
HLA-A-208ENST00000496081 WDR77Q9BQA1 342 aaPredicted RBP15.08■□□□□ 0
HLA-A-208ENST00000496081 SEMA4CQ9C0C4 833 aa15.08■□□□□ 0
HLA-A-208ENST00000496081 HOXD1Q9GZZ0 328 aa15.08■□□□□ 0
HLA-A-208ENST00000496081 AKAP7Q9P0M2 348 aaPredicted RBP15.08■□□□□ 0
HLA-A-208ENST00000496081 ZNF223Q9UK11 482 aaPredicted RBP15.08■□□□□ 0
HLA-A-208ENST00000496081 MRTO4Q9UKD2 239 aaKnown RBP15.08■□□□□ 0
HLA-A-208ENST00000496081 XPNPEP2O43895 674 aa15.07■□□□□ 0
HLA-A-208ENST00000496081 ABCB7O75027 752 aa15.07■□□□□ 0
HLA-A-208ENST00000496081 UTS2O95399 124 aa15.07■□□□□ 0
HLA-A-208ENST00000496081 CSTAP01040 98 aa15.07■□□□□ 0
HLA-A-208ENST00000496081 OMPP47874 163 aa15.07■□□□□ 0
HLA-A-208ENST00000496081 CXCR4P61073 352 aa15.07■□□□□ 0
HLA-A-208ENST00000496081 INSM1Q01101 510 aaPredicted RBP15.07■□□□□ 0
HLA-A-208ENST00000496081 SMN1Q16637 294 aaKnown RBP15.07■□□□□ 0
HLA-A-208ENST00000496081 ZNF613Q6PF04 617 aa15.07■□□□□ 0
HLA-A-208ENST00000496081 TMEM205Q6UW68 189 aa15.07■□□□□ 0
HLA-A-208ENST00000496081 WDR88Q6ZMY6 472 aa15.07■□□□□ 0
HLA-A-208ENST00000496081 MBOAT2Q6ZWT7 520 aa15.07■□□□□ 0
HLA-A-208ENST00000496081 C17orf47Q8NEP4 570 aa15.07■□□□□ 0
HLA-A-208ENST00000496081 RHOXF1Q8NHV9 184 aa15.07■□□□□ 0
HLA-A-208ENST00000496081 PIGXQ8TBF5 258 aa15.07■□□□□ 0
HLA-A-208ENST00000496081 ADOQ96SZ5 270 aa15.07■□□□□ 0
HLA-A-208ENST00000496081 WDR54Q9H977 334 aa15.07■□□□□ 0
HLA-A-208ENST00000496081 ZNF226Q9NYT6 803 aa15.07■□□□□ 0
HLA-A-208ENST00000496081 BLOC1S6Q9UL45 172 aa15.07■□□□□ 0
HLA-A-208ENST00000496081 PPIEQ9UNP9 301 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms