RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 PPCSQ9HAB8 311 aa20.8■□□□□ 0.92
COL27A1-208ENST00000494780 UBQLN4Q9NRR5 601 aa20.8■□□□□ 0.92
COL27A1-208ENST00000494780 MID2Q9UJV3 735 aa20.8■□□□□ 0.92
COL27A1-208ENST00000494780 TMED5Q9Y3A6 229 aa20.8■□□□□ 0.92
COL27A1-208ENST00000494780 DSCAMO60469 2012 aa20.8■□□□□ 0.92
COL27A1-208ENST00000494780 FN1P02751 2386 aaKnown RBP20.79■□□□□ 0.92
COL27A1-208ENST00000494780 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.79■□□□□ 0.92
COL27A1-208ENST00000494780 COPEO14579 308 aa20.79■□□□□ 0.92
COL27A1-208ENST00000494780 HSPA4LO95757 839 aa20.79■□□□□ 0.92
COL27A1-208ENST00000494780 ALOX5P09917 674 aa20.79■□□□□ 0.92
COL27A1-208ENST00000494780 HPGDP15428 266 aa20.79■□□□□ 0.92
COL27A1-208ENST00000494780 ME2P23368 584 aa20.79■□□□□ 0.92
COL27A1-208ENST00000494780 SERPINB4P48594 390 aa20.79■□□□□ 0.92
COL27A1-208ENST00000494780 DUSP5Q16690 384 aa20.79■□□□□ 0.92
COL27A1-208ENST00000494780 PDSS1Q5T2R2 415 aa20.79■□□□□ 0.92
COL27A1-208ENST00000494780 BEND4Q6ZU67 534 aa20.79■□□□□ 0.92
COL27A1-208ENST00000494780 ZAR1Q86SH2 424 aa20.79■□□□□ 0.92
COL27A1-208ENST00000494780 TDRPQ86YL5 185 aa20.79■□□□□ 0.92
COL27A1-208ENST00000494780 COX18Q8N8Q8 333 aa20.79■□□□□ 0.92
COL27A1-208ENST00000494780 MTERF3Q96E29 417 aa20.79■□□□□ 0.92
COL27A1-208ENST00000494780 NPAS1Q99742 590 aa20.79■□□□□ 0.92
COL27A1-208ENST00000494780 TRMOQ9BU70 441 aa20.79■□□□□ 0.92
COL27A1-208ENST00000494780 OR10A4Q9H209 315 aa20.79■□□□□ 0.92
COL27A1-208ENST00000494780 C12orf65Q9H3J6 166 aaKnown RBP20.79■□□□□ 0.92
COL27A1-208ENST00000494780 A0A1W2PQD3 144 aa20.78■□□□□ 0.92
COL27A1-208ENST00000494780 SCDO00767 359 aa20.78■□□□□ 0.92
COL27A1-208ENST00000494780 TNFSF11O14788 317 aa20.78■□□□□ 0.92
COL27A1-208ENST00000494780 CHEK2O96017 543 aa20.78■□□□□ 0.92
COL27A1-208ENST00000494780 SHBGP04278 402 aa20.78■□□□□ 0.92
COL27A1-208ENST00000494780 ASMTP46597 345 aa20.78■□□□□ 0.92
COL27A1-208ENST00000494780 NR1H2P55055 460 aa20.78■□□□□ 0.92
COL27A1-208ENST00000494780 RPL38P63173 70 aaKnown RBP20.78■□□□□ 0.92
COL27A1-208ENST00000494780 RFTN2Q52LD8 501 aaPredicted RBP20.78■□□□□ 0.92
COL27A1-208ENST00000494780 EXOSC6Q5RKV6 272 aaKnown RBP20.78■□□□□ 0.92
COL27A1-208ENST00000494780 HBMQ6B0K9 141 aa20.78■□□□□ 0.92
COL27A1-208ENST00000494780 GTF2IRD2BQ6EKJ0 949 aa20.78■□□□□ 0.92
COL27A1-208ENST00000494780 GTF2IRD2Q86UP8 949 aa20.78■□□□□ 0.92
COL27A1-208ENST00000494780 STK32CQ86UX6 486 aa20.78■□□□□ 0.92
COL27A1-208ENST00000494780 CLHC1Q8NHS4 586 aa20.78■□□□□ 0.92
COL27A1-208ENST00000494780 IGFBPL1Q8WX77 278 aa20.78■□□□□ 0.92
COL27A1-208ENST00000494780 SH3YL1Q96HL8 342 aaPredicted RBP20.78■□□□□ 0.92
COL27A1-208ENST00000494780 TUBB1Q9H4B7 451 aa20.78■□□□□ 0.92
COL27A1-208ENST00000494780 FBXO34Q9NWN3 711 aa20.78■□□□□ 0.92
COL27A1-208ENST00000494780 BAIAP2L1Q9UHR4 511 aa20.78■□□□□ 0.92
COL27A1-208ENST00000494780 GPR52Q9Y2T5 361 aa20.78■□□□□ 0.92
COL27A1-208ENST00000494780 FIS1Q9Y3D6 152 aa20.78■□□□□ 0.92
COL27A1-208ENST00000494780 A0A0J9YW62 118 aa20.77■□□□□ 0.92
COL27A1-208ENST00000494780 LSM1O15116 133 aaKnown RBP20.77■□□□□ 0.92
COL27A1-208ENST00000494780 TMCC2O75069 709 aa20.77■□□□□ 0.92
COL27A1-208ENST00000494780 OPN1LWP04000 364 aa20.77■□□□□ 0.92
COL27A1-208ENST00000494780 LINC00032P0C843 101 aa20.77■□□□□ 0.92
COL27A1-208ENST00000494780 PAX1P15863 534 aa20.77■□□□□ 0.92
COL27A1-208ENST00000494780 DDX5P17844 614 aaKnown RBP20.77■□□□□ 0.92
COL27A1-208ENST00000494780 PTH2RP49190 550 aa20.77■□□□□ 0.92
COL27A1-208ENST00000494780 PRIM2P49643 509 aa20.77■□□□□ 0.92
COL27A1-208ENST00000494780 KANK2Q63ZY3 851 aa20.77■□□□□ 0.92
COL27A1-208ENST00000494780 ZNF704Q6ZNC4 412 aaPredicted RBP20.77■□□□□ 0.92
COL27A1-208ENST00000494780 R3HCC1LQ7Z5L2 792 aaKnown RBP20.77■□□□□ 0.92
COL27A1-208ENST00000494780 TRABD2AQ86V40 505 aa20.77■□□□□ 0.92
COL27A1-208ENST00000494780 C10orf107Q8IVU9 208 aa20.77■□□□□ 0.92
COL27A1-208ENST00000494780 GSPT2Q8IYD1 628 aaKnown RBP20.77■□□□□ 0.92
COL27A1-208ENST00000494780 B4GALNT2Q8NHY0 566 aa20.77■□□□□ 0.92
COL27A1-208ENST00000494780 POC1BQ8TC44 478 aa20.77■□□□□ 0.92
COL27A1-208ENST00000494780 NUDT8Q8WV74 236 aa20.77■□□□□ 0.92
COL27A1-208ENST00000494780 C16orf58Q96GQ5 468 aa20.77■□□□□ 0.92
COL27A1-208ENST00000494780 GATA5Q9BWX5 397 aaPredicted RBP20.77■□□□□ 0.92
COL27A1-208ENST00000494780 DNAJC15Q9Y5T4 150 aa20.77■□□□□ 0.92
COL27A1-208ENST00000494780 TRIM64A6NGJ6 449 aa20.76■□□□□ 0.91
COL27A1-208ENST00000494780 TRIM64BA6NI03 449 aa20.76■□□□□ 0.91
COL27A1-208ENST00000494780 SMAD7O15105 426 aaKnown RBP20.76■□□□□ 0.91
COL27A1-208ENST00000494780 TUBBP07437 444 aa20.76■□□□□ 0.91
COL27A1-208ENST00000494780 PABPC4LP0CB38 370 aaKnown RBP20.76■□□□□ 0.91
COL27A1-208ENST00000494780 KRT4P19013 534 aa20.76■□□□□ 0.91
COL27A1-208ENST00000494780 EIF1P41567 113 aaKnown RBP20.76■□□□□ 0.91
COL27A1-208ENST00000494780 POU6F2P78424 691 aaPredicted RBP20.76■□□□□ 0.91
COL27A1-208ENST00000494780 PCLAFQ15004 111 aa20.76■□□□□ 0.91
COL27A1-208ENST00000494780 MLC1Q15049 377 aa20.76■□□□□ 0.91
COL27A1-208ENST00000494780 LRIG3Q6UXM1 1119 aa20.76■□□□□ 0.91
COL27A1-208ENST00000494780 EIF1ADQ8N9N8 165 aaKnown RBP20.76■□□□□ 0.91
COL27A1-208ENST00000494780 TMEM171Q8WVE6 324 aa20.76■□□□□ 0.91
COL27A1-208ENST00000494780 JADE3Q92613 823 aa20.76■□□□□ 0.91
COL27A1-208ENST00000494780 OSTF1Q92882 214 aa20.76■□□□□ 0.91
COL27A1-208ENST00000494780 FAM120BQ96EK7 910 aaKnown RBP20.76■□□□□ 0.91
COL27A1-208ENST00000494780 KLHL15Q96M94 604 aa20.76■□□□□ 0.91
COL27A1-208ENST00000494780 BTBD2Q9BX70 525 aa20.76■□□□□ 0.91
COL27A1-208ENST00000494780 ACTR6Q9GZN1 396 aa20.76■□□□□ 0.91
COL27A1-208ENST00000494780 TMEM185BQ9H7F4 350 aa20.76■□□□□ 0.91
COL27A1-208ENST00000494780 DUSP22Q9NRW4 184 aa20.76■□□□□ 0.91
COL27A1-208ENST00000494780 HEATR5AQ86XA9 2040 aa20.75■□□□□ 0.91
COL27A1-208ENST00000494780 ROS1P08922 2347 aa20.75■□□□□ 0.91
COL27A1-208ENST00000494780 TRIM13O60858 407 aa20.75■□□□□ 0.91
COL27A1-208ENST00000494780 LINGO3P0C6S8 592 aa20.75■□□□□ 0.91
COL27A1-208ENST00000494780 BCKDHAP12694 445 aa20.75■□□□□ 0.91
COL27A1-208ENST00000494780 PSMB1P20618 241 aaKnown RBP20.75■□□□□ 0.91
COL27A1-208ENST00000494780 AGTR1P30556 359 aa20.75■□□□□ 0.91
COL27A1-208ENST00000494780 CARD18P57730 90 aa20.75■□□□□ 0.91
COL27A1-208ENST00000494780 CD226Q15762 336 aa20.75■□□□□ 0.91
COL27A1-208ENST00000494780 GALNTL6Q49A17 601 aa20.75■□□□□ 0.91
COL27A1-208ENST00000494780 CCNJQ5T5M9 372 aa20.75■□□□□ 0.91
COL27A1-208ENST00000494780 MTERF4Q7Z6M4 381 aaKnown RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms