RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, human

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTF3A-208	ENST00000493903	CSNK1G3	Q9Y6M4	447 aa		3.76	□□□□□ -1.81
GTF3A-208	ENST00000493903	TMEM94	Q12767	1356 aa		3.76	□□□□□ -1.81
GTF3A-208	ENST00000493903	NKTR	P30414	1462 aa	Known RBP	3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	PIK3C2B	O00750	1634 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	IGHV3-20	A0A0C4DH32	117 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	FOXE1	O00358	373 aa	Predicted RBP	3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	P2RY10	O00398	339 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	TRAFD1	O14545	582 aa	Predicted RBP	3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	TAPBP	O15533	448 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	SMAD6	O43541	496 aa	Known RBP	3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	UPK3A	O75631	287 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	KRT6A	P02538	564 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	CRYGB	P07316	175 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	HBQ1	P09105	142 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	PABPC4L	P0CB38	370 aa	Known RBP	3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	CDK4	P11802	303 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	XRCC1	P18887	633 aa	Predicted RBP	3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	UCP1	P25874	307 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	CALML3	P27482	149 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	CCT6A	P40227	531 aa	Known RBP	3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	SYK	P43405	635 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	SLC7A2	P52569	658 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	EFNB2	P52799	333 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	NDST2	P52849	883 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	RPS27A	P62979	156 aa	Known RBP	3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	CYCS	P99999	105 aa	Known RBP	3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	BDH1	Q02338	343 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	ZNF85	Q03923	595 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	UPP1	Q16831	310 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	ECSCR	Q19T08	205 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	WDR25	Q64LD2	544 aa	Predicted RBP	3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	LRRC66	Q68CR7	880 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	ATL3	Q6DD88	541 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	AWAT2	Q6E213	333 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	ZNF771	Q7L3S4	317 aa	Predicted RBP	3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	CCDC50	Q8IVM0	306 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	C17orf47	Q8NEP4	570 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	OR10V1	Q8NGI7	309 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	KCNG3	Q8TAE7	436 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	TSEN15	Q8WW01	171 aa	Known RBP	3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	GIMAP1	Q8WWP7	306 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	PEX13	Q92968	403 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	MCUR1	Q96AQ8	359 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	TADA1	Q96BN2	335 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	ZNF524	Q96C55	264 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	LYZL4	Q96KX0	146 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	C12orf66	Q96MD2	445 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	ZNF300	Q96RE9	604 aa	Predicted RBP	3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	SLC6A7	Q99884	636 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	FAM173A	Q9BQD7	235 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	DUSP16	Q9BY84	665 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	THYN1	Q9P016	225 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	SEC14L4	Q9UDX3	406 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	KIAA1257	Q9ULG3	409 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	PPP1R3C	Q9UQK1	317 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	RASD1	Q9Y272	281 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	POLDIP2	Q9Y2S7	368 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	ARHGAP31	Q2M1Z3	1444 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	MYH15	Q9Y2K3	1946 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	DIP2A	Q14689	1571 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	PHLPP1	O60346	1717 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	CEP152	O94986	1710 aa		3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	KDM5A	P29375	1690 aa	Known RBP	3.75	□□□□□ -1.81
GTF3A-208	ENST00000493903	FRMPD4	Q14CM0	1322 aa		3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	CDK12	Q9NYV4	1490 aa	Predicted RBP	3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	AHDC1	Q5TGY3	1603 aa	Predicted RBP	3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	PPIAL4E	A0A075B759	164 aa		3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	ARPC4-TTLL3	A0A0A6YYG9	625 aa		3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	TRBV7-9	A0A0J9YWB2	115 aa		3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903		A0A1B0GUV1	79 aa		3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	BLOC1S5-TXNDC5	H3BN57	136 aa		3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	MSH4	O15457	936 aa		3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	PPIH	O43447	177 aa	Known RBP	3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	KRT36	O76013	467 aa		3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	NXPH4	O95158	308 aa		3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	LRAT	O95237	230 aa		3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	ALPL	P05186	524 aa		3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	STAG3L3	P0CL85	134 aa		3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	PRSS56	P0CW18	603 aa		3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	PPIAL4F	P0DN26	164 aa		3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	T-ENOL	P0DO92	83 aa		3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	BRCC3	P46736	316 aa		3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	P2RY1	P47900	373 aa		3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	PEX3	P56589	373 aa		3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	HAND2	P61296	217 aa		3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	TGM3	Q08188	693 aa		3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	RIPPLY1	Q0D2K3	151 aa		3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	KIAA0141	Q14154	515 aa	Predicted RBP	3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	MTF1	Q14872	753 aa		3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	RAB35	Q15286	201 aa		3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	KNOP1	Q1ED39	458 aa	Known RBP	3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	BEND3	Q5T5X7	828 aa		3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	RAET1L	Q5VY80	246 aa		3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	KCNIP4	Q6PIL6	250 aa		3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	FRRS1	Q6ZNA5	592 aa		3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	OTUD6A	Q7L8S5	288 aa		3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	TMCO2	Q7Z6W1	182 aa	Predicted RBP	3.74	□□□□□ -1.81
GTF3A-208	ENST00000493903	CATSPERD	Q86XM0	798 aa		3.74	□□□□□ -1.81

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