RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 OR5M1Q8NGP8 315 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 OR2W6PQ8NHA6 318 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 POC1BQ8TC44 478 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 TCP10LQ8TDR4 215 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 AENQ8WTP8 325 aaKnown RBP7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 TWIST2Q8WVJ9 160 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 GMPPAQ96IJ6 420 aaPredicted RBP7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 PPP3R2Q96LZ3 170 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 ZIM3Q96PE6 472 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 KLHDC3Q9BQ90 382 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 YIPF4Q9BSR8 244 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 OPN3Q9H1Y3 402 aaPredicted RBP7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 OR10A4Q9H209 315 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 PIGUQ9H490 435 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 EML4Q9HC35 981 aaKnown RBP7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 GLRX2Q9NS18 164 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 MED17Q9NVC6 651 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 PAQR5Q9NXK6 330 aaPredicted RBP7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 ASIC5Q9NY37 505 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 SH3BP4Q9P0V3 963 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 STOML1Q9UBI4 398 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 ICAM5Q9UMF0 924 aa7.51□□□□□ -1.21
SMARCB1-207ENST00000491967 ZANQ9Y493 2812 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 A0A0J9YW62 118 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 SMIM23A6NLE4 172 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 TMEM114B3SHH9 223 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 SHISA8B8ZZ34 492 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 H3BML4 177 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 CASKO14936 926 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 KLF4O43474 513 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 HMGN2P05204 90 aaKnown RBP7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 THBDP07204 575 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 BPGMP07738 259 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 GUSBP08236 651 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 ALOX5P09917 674 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 PAX1P15863 534 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 CREB1P16220 341 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 DDX5P17844 614 aaKnown RBP7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 PRPS1L1P21108 318 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 TCEA1P23193 301 aaKnown RBP7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 GPC1P35052 558 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 EIF1P41567 113 aaKnown RBP7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 PPP2R2AP63151 447 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 KEAP1Q14145 624 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 CD226Q15762 336 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 SMU1Q2TAY7 513 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 SLC25A53Q5H9E4 307 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 SHEQ5VZ18 495 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 CDC73Q6P1J9 531 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 PRSS57Q6UWY2 283 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 STAC2Q6ZMT1 411 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 P4HA3Q7Z4N8 544 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 WDR75Q8IWA0 830 aaKnown RBP7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 CNEP1R1Q8N9A8 125 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 CCDC63Q8NA47 563 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 WFDC11Q8NEX6 87 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 OR7A2PQ8NGA2 310 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 OR6K3Q8NGY3 331 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 OR10D3Q8NH80 312 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 CLHC1Q8NHS4 586 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 OR5P2Q8WZ92 322 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 SLC9A6Q92581 669 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 ZNF524Q96C55 264 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 FAM111AQ96PZ2 611 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 MECRQ9BV79 373 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 HOXD1Q9GZZ0 328 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 GP6Q9HCN6 339 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 NEUROD4Q9HD90 331 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 EQTNQ9NQ60 294 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 KLHL28Q9NXS3 571 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 ZNF226Q9NYT6 803 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 ZDHHC2Q9UIJ5 367 aa7.5□□□□□ -1.21
SMARCB1-207ENST00000491967 PLCE1Q9P212 2302 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 ESPNB1AK53 854 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 SEC14L5O43304 696 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 SCN2BO60939 215 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 SMNDC1O75940 238 aaKnown RBP eCLIP7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 DHRS4L1P0CG22 281 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 POU2F1P14859 743 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 PPP3CBP16298 524 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 EFNA1P20827 205 aaPredicted RBP7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 ELK4P28324 431 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 MAPK1P28482 360 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 HPCAL1P37235 193 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 CCT3P49368 545 aaKnown RBP7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 PRIM2P49643 509 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 PRKAG1P54619 331 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 SUMO3P55854 103 aaPredicted RBP7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 CLDN8P56748 225 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 VSNL1P62760 191 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 POU6F2P78424 691 aaPredicted RBP7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 ZNF117Q03924 483 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 EMX2Q04743 252 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 PTGR1Q14914 329 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 GALNTL6Q49A17 601 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 TNFAIP8L3Q5GJ75 292 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 CCNJQ5T5M9 372 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 IL23RQ5VWK5 629 aa7.49□□□□□ -1.21
SMARCB1-207ENST00000491967 WDR93Q6P2C0 686 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms