RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 DCST1Q5T197 706 aa21.13■□□□□ 0.97
USF3-203ENST00000491165 RHBDD2Q6NTF9 364 aa21.13■□□□□ 0.97
USF3-203ENST00000491165 TMEM53Q6P2H8 277 aa21.13■□□□□ 0.97
USF3-203ENST00000491165 CCBE1Q6UXH8 406 aaPredicted RBP21.13■□□□□ 0.97
USF3-203ENST00000491165 CA13Q8N1Q1 262 aa21.13■□□□□ 0.97
USF3-203ENST00000491165 TMEM52Q8NDY8 209 aa21.13■□□□□ 0.97
USF3-203ENST00000491165 GPR32P1Q8NGA4 272 aa21.13■□□□□ 0.97
USF3-203ENST00000491165 KCNS3Q9BQ31 491 aa21.13■□□□□ 0.97
USF3-203ENST00000491165 SLAMF7Q9NQ25 335 aa21.13■□□□□ 0.97
USF3-203ENST00000491165 SLC39A1Q9NY26 324 aa21.13■□□□□ 0.97
USF3-203ENST00000491165 PISDQ9UG56 409 aa21.13■□□□□ 0.97
USF3-203ENST00000491165 FAAHO00519 579 aa21.13■□□□□ 0.97
USF3-203ENST00000491165 PDPK1O15530 556 aa21.13■□□□□ 0.97
USF3-203ENST00000491165 B3GALT2O43825 422 aa21.13■□□□□ 0.97
USF3-203ENST00000491165 APOA1P02647 267 aa21.13■□□□□ 0.97
USF3-203ENST00000491165 SEC23BQ15437 767 aa21.13■□□□□ 0.97
USF3-203ENST00000491165 NDUFAF5Q5TEU4 345 aa21.13■□□□□ 0.97
USF3-203ENST00000491165 SLX4IPQ5VYV7 408 aa21.13■□□□□ 0.97
USF3-203ENST00000491165 GDPD3Q7L5L3 318 aa21.13■□□□□ 0.97
USF3-203ENST00000491165 KRT73Q86Y46 540 aa21.13■□□□□ 0.97
USF3-203ENST00000491165 NATD1Q8N6N6 113 aa21.13■□□□□ 0.97
USF3-203ENST00000491165 SLC30A2Q9BRI3 323 aa21.13■□□□□ 0.97
USF3-203ENST00000491165 CCDC32Q9BV29 185 aa21.13■□□□□ 0.97
USF3-203ENST00000491165 NEUROD4Q9HD90 331 aa21.13■□□□□ 0.97
USF3-203ENST00000491165 SDK2Q58EX2 2172 aa21.12■□□□□ 0.97
USF3-203ENST00000491165 TEX51A0A1B0GUA7 166 aa21.12■□□□□ 0.97
USF3-203ENST00000491165 B4E171 279 aa21.12■□□□□ 0.97
USF3-203ENST00000491165 PLD2O14939 933 aa21.12■□□□□ 0.97
USF3-203ENST00000491165 PROM1O43490 865 aa21.12■□□□□ 0.97
USF3-203ENST00000491165 OR10H3O60404 316 aa21.12■□□□□ 0.97
USF3-203ENST00000491165 SOX14O95416 240 aa21.12■□□□□ 0.97
USF3-203ENST00000491165 AIFM1O95831 613 aa21.12■□□□□ 0.97
USF3-203ENST00000491165 TSPAN7P41732 249 aa21.12■□□□□ 0.97
USF3-203ENST00000491165 TMEM201Q5SNT2 666 aa21.12■□□□□ 0.97
USF3-203ENST00000491165 TCTN3Q6NUS6 607 aa21.12■□□□□ 0.97
USF3-203ENST00000491165 RBCK1Q9BYM8 510 aa21.12■□□□□ 0.97
USF3-203ENST00000491165 RACGAP1Q9H0H5 632 aa21.12■□□□□ 0.97
USF3-203ENST00000491165 HHATLQ9HCP6 504 aa21.12■□□□□ 0.97
USF3-203ENST00000491165 WBP11Q9Y2W2 641 aaKnown RBP21.12■□□□□ 0.97
USF3-203ENST00000491165 LSM2Q9Y333 95 aaKnown RBP21.12■□□□□ 0.97
USF3-203ENST00000491165 A0A1B0GX78 115 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 CTDSP2O14595 271 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 TBX19O60806 448 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 H1F0P07305 194 aaKnown RBP21.11■□□□□ 0.97
USF3-203ENST00000491165 FEN1P39748 380 aaKnown RBP21.11■□□□□ 0.97
USF3-203ENST00000491165 PCYT1AP49585 367 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 BCL2A1Q16548 175 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 FRYQ5TBA9 3013 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 ZNF385CQ66K41 422 aaPredicted RBP21.11■□□□□ 0.97
USF3-203ENST00000491165 CASP12Q6UXS9 341 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 TMEM151BQ8IW70 566 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 ADAMTS14Q8WXS8 1223 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 TMEM80Q96HE8 168 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 DHRS1Q96LJ7 313 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 CNPPD1Q9BV87 410 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 C3orf14Q9HBI5 128 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 EXOSC4Q9NPD3 245 aaKnown RBP21.11■□□□□ 0.97
USF3-203ENST00000491165 SLC22A11Q9NSA0 550 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 DNAJC27Q9NZQ0 273 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 CCDC187A0A096LP49 1063 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 A0A1W2PS29 197 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 H3BN98 237 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 PGRMC2O15173 223 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 CHST10O43529 356 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 DYRK3O43781 588 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 CASP3P42574 277 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 XKP51811 444 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 FOXL2P58012 376 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 SHC2P98077 582 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 HEPACAMQ14CZ8 416 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 SPDYE7PQ495Y7 208 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 C12orf73Q69YU5 71 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 LCN10Q6JVE6 187 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 SLC34A3Q8N130 599 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 CHAC2Q8WUX2 184 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 RAB8BQ92930 207 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 SDHCQ99643 169 aaPredicted RBP21.11■□□□□ 0.97
USF3-203ENST00000491165 ASPNQ9BXN1 380 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 SMURF1Q9HCE7 757 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 AKAP7Q9P0M2 348 aaPredicted RBP21.11■□□□□ 0.97
USF3-203ENST00000491165 POU2F3Q9UKI9 436 aa21.11■□□□□ 0.97
USF3-203ENST00000491165 OR2W5A6NFC9 320 aa21.1■□□□□ 0.97
USF3-203ENST00000491165 SEMA7AO75326 666 aa21.1■□□□□ 0.97
USF3-203ENST00000491165 JMJD7P0C870 316 aa21.1■□□□□ 0.97
USF3-203ENST00000491165 GSTT2P0CG29 244 aa21.1■□□□□ 0.97
USF3-203ENST00000491165 GSTT2BP0CG30 244 aa21.1■□□□□ 0.97
USF3-203ENST00000491165 DDX5P17844 614 aaKnown RBP21.1■□□□□ 0.97
USF3-203ENST00000491165 ENDOUP21128 410 aaKnown RBP21.1■□□□□ 0.97
USF3-203ENST00000491165 ZNF10P21506 573 aaPredicted RBP21.1■□□□□ 0.97
USF3-203ENST00000491165 HSPB3Q12988 150 aa21.1■□□□□ 0.97
USF3-203ENST00000491165 ERV3-1Q14264 604 aa21.1■□□□□ 0.97
USF3-203ENST00000491165 NCF4Q15080 339 aa21.1■□□□□ 0.97
USF3-203ENST00000491165 DEF8Q6ZN54 512 aa21.1■□□□□ 0.97
USF3-203ENST00000491165 GDPGP1Q6ZNW5 385 aa21.1■□□□□ 0.97
USF3-203ENST00000491165 C6orf120Q7Z4R8 191 aa21.1■□□□□ 0.97
USF3-203ENST00000491165 TMPRSS12Q86WS5 348 aa21.1■□□□□ 0.97
USF3-203ENST00000491165 CLIP3Q96DZ5 547 aa21.1■□□□□ 0.97
USF3-203ENST00000491165 PEX11GQ96HA9 241 aa21.1■□□□□ 0.97
USF3-203ENST00000491165 ZNF354BQ96LW1 612 aa21.1■□□□□ 0.97
USF3-203ENST00000491165 MND1Q9BWT6 205 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms