RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 LURAP1LQ8IV03 231 aa6.97□□□□□ -1.29
CLDN1-202ENST00000490800 ST13P4Q8IZP2 240 aaPredicted RBP6.97□□□□□ -1.29
CLDN1-202ENST00000490800 LILRA2Q8N149 483 aa6.97□□□□□ -1.29
CLDN1-202ENST00000490800 PQLC1Q8N2U9 271 aa6.97□□□□□ -1.29
CLDN1-202ENST00000490800 FAM86B1Q8N7N1 296 aa6.97□□□□□ -1.29
CLDN1-202ENST00000490800 PAPD5Q8NDF8 572 aaKnown RBP6.97□□□□□ -1.29
CLDN1-202ENST00000490800 PLPP5Q8NEB5 264 aa6.97□□□□□ -1.29
CLDN1-202ENST00000490800 OR5D16Q8NGK9 328 aa6.97□□□□□ -1.29
CLDN1-202ENST00000490800 FBXO30Q8TB52 745 aa6.97□□□□□ -1.29
CLDN1-202ENST00000490800 RAB8BQ92930 207 aa6.97□□□□□ -1.29
CLDN1-202ENST00000490800 TSLPQ969D9 159 aa6.97□□□□□ -1.29
CLDN1-202ENST00000490800 CTHRC1Q96CG8 243 aa6.97□□□□□ -1.29
CLDN1-202ENST00000490800 DGAT2Q96PD7 388 aa6.97□□□□□ -1.29
CLDN1-202ENST00000490800 MS4A4EQ96PG1 132 aa6.97□□□□□ -1.29
CLDN1-202ENST00000490800 YIPF4Q9BSR8 244 aa6.97□□□□□ -1.29
CLDN1-202ENST00000490800 CXorf21Q9HAI6 301 aa6.97□□□□□ -1.29
CLDN1-202ENST00000490800 DDX18Q9NVP1 670 aaKnown RBP6.97□□□□□ -1.29
CLDN1-202ENST00000490800 ARMC1Q9NVT9 282 aa6.97□□□□□ -1.29
CLDN1-202ENST00000490800 C19orf25Q9UFG5 118 aaPredicted RBP6.97□□□□□ -1.29
CLDN1-202ENST00000490800 ZNF639Q9UID6 485 aa6.97□□□□□ -1.29
CLDN1-202ENST00000490800 PRDM4Q9UKN5 801 aa6.97□□□□□ -1.29
CLDN1-202ENST00000490800 PCDHB10Q9UN67 800 aa6.97□□□□□ -1.29
CLDN1-202ENST00000490800 AP4S1Q9Y587 144 aa6.97□□□□□ -1.29
CLDN1-202ENST00000490800 SPTBN1Q01082 2364 aaKnown RBP6.97□□□□□ -1.29
CLDN1-202ENST00000490800 HIVEP3Q5T1R4 2406 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 OR5H15A6NDH6 313 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 HRKO00198 91 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 ZG16O60844 167 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 TIPRLO75663 272 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 WISP2O76076 250 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 PRKD3O94806 890 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 RASAL1O95294 804 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 CBX7O95931 251 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 STSP08842 583 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 TFPTP0C1Z6 253 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 PSMA4P25789 261 aaKnown RBP6.96□□□□□ -1.3
CLDN1-202ENST00000490800 MST1P26927 711 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 AQP1P29972 269 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 GALNSP34059 522 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 GCKP35557 465 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 TDGF1P3P51864 188 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 SESN3P58005 492 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 TXNL4AP83876 142 aaKnown RBP6.96□□□□□ -1.3
CLDN1-202ENST00000490800 BIKQ13323 160 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 EXOSC7Q15024 291 aaKnown RBP6.96□□□□□ -1.3
CLDN1-202ENST00000490800 NSDHLQ15738 373 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 LRRC23Q53EV4 343 aaPredicted RBP6.96□□□□□ -1.3
CLDN1-202ENST00000490800 ACER2Q5QJU3 275 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 C1QL3Q5VWW1 255 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 PLAG1Q6DJT9 500 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 REEP3Q6NUK4 255 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 H3F3CQ6NXT2 135 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 CDC73Q6P1J9 531 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 CBLL1Q75N03 491 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 EIF3MQ7L2H7 374 aaKnown RBP6.96□□□□□ -1.3
CLDN1-202ENST00000490800 WDR53Q7Z5U6 358 aaPredicted RBP6.96□□□□□ -1.3
CLDN1-202ENST00000490800 SLC30A8Q8IWU4 369 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 LGI4Q8N135 537 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 EID3Q8N140 333 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 ANKFN1Q8N957 763 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 SLC38A5Q8WUX1 472 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 NRG4Q8WWG1 115 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 XAGE5Q8WWM1 108 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 NR4A3Q92570 626 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 HOXB13Q92826 284 aaPredicted RBP6.96□□□□□ -1.3
CLDN1-202ENST00000490800 RIT1Q92963 219 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 TP53INP1Q96A56 240 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 TAMM41Q96BW9 452 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 OTUB1Q96FW1 271 aaPredicted RBP6.96□□□□□ -1.3
CLDN1-202ENST00000490800 RBM18Q96H35 190 aaKnown RBP6.96□□□□□ -1.3
CLDN1-202ENST00000490800 TMEM19Q96HH6 336 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 ZNF354BQ96LW1 612 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 PTCHD1Q96NR3 888 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 OR7D2Q96RA2 312 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 PKP2Q99959 881 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 PELOQ9BRX2 385 aaKnown RBP6.96□□□□□ -1.3
CLDN1-202ENST00000490800 ACTRT3Q9BYD9 372 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 RNF32Q9H0A6 362 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 ADAP2Q9NPF8 381 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 EQTNQ9NQ60 294 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 THUMPD1Q9NXG2 353 aaKnown RBP6.96□□□□□ -1.3
CLDN1-202ENST00000490800 C6orf203Q9P0P8 240 aaPredicted RBP6.96□□□□□ -1.3
CLDN1-202ENST00000490800 TEKT2Q9UIF3 430 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 RIMS3Q9UJD0 308 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 AURKCQ9UQB9 309 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 ANGPT4Q9Y264 503 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 KCNE3Q9Y6H6 103 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 V9GYQ6 96 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 NOTCH2Q04721 2471 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 UNC79Q9P2D8 2635 aa6.96□□□□□ -1.3
CLDN1-202ENST00000490800 A0A1B0GUH1 482 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 TCRBV16S1A1N1A0A5B0 115 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 C5orf58C9J3I9 102 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 M0QX08 132 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 RGS13O14921 159 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 CASQ2O14958 399 aaPredicted RBP6.95□□□□□ -1.3
CLDN1-202ENST00000490800 HNRNPRO43390 633 aaKnown RBP6.95□□□□□ -1.3
CLDN1-202ENST00000490800 ASNA1O43681 348 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 PRAMEF2O60811 474 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 COQ9O75208 318 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms