RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 SUCLG1P53597 346 aaKnown RBP17.82■□□□□ 0.44
SMC4-222ENST00000490207 CD226Q15762 336 aa17.82■□□□□ 0.44
SMC4-222ENST00000490207 DPY19L1Q2PZI1 675 aa17.82■□□□□ 0.44
SMC4-222ENST00000490207 TMEM44Q2T9K0 475 aa17.82■□□□□ 0.44
SMC4-222ENST00000490207 ANXA8L1Q5VT79 327 aa17.82■□□□□ 0.44
SMC4-222ENST00000490207 ATG16L1Q676U5 607 aa17.82■□□□□ 0.44
SMC4-222ENST00000490207 ZZZ3Q8IYH5 903 aa17.82■□□□□ 0.44
SMC4-222ENST00000490207 ZNF527Q8NB42 609 aa17.82■□□□□ 0.44
SMC4-222ENST00000490207 JKAMPQ9P055 326 aa17.82■□□□□ 0.44
SMC4-222ENST00000490207 MARCOQ9UEW3 520 aaPredicted RBP17.82■□□□□ 0.44
SMC4-222ENST00000490207 PCDHGB4Q9UN71 923 aa17.82■□□□□ 0.44
SMC4-222ENST00000490207 AP4B1Q9Y6B7 739 aa17.82■□□□□ 0.44
SMC4-222ENST00000490207 TACC2O95359 2948 aa17.82■□□□□ 0.44
SMC4-222ENST00000490207 AKAP9Q99996 3911 aa17.81■□□□□ 0.44
SMC4-222ENST00000490207 H0YC42 278 aa17.81■□□□□ 0.44
SMC4-222ENST00000490207 ALDOCP09972 364 aaKnown RBP17.81■□□□□ 0.44
SMC4-222ENST00000490207 ZNF41P51814 821 aaPredicted RBP17.81■□□□□ 0.44
SMC4-222ENST00000490207 TPD52P55327 224 aaPredicted RBP17.81■□□□□ 0.44
SMC4-222ENST00000490207 CLDN15P56746 228 aa17.81■□□□□ 0.44
SMC4-222ENST00000490207 CLDN20P56880 219 aa17.81■□□□□ 0.44
SMC4-222ENST00000490207 RPS26P62854 115 aaKnown RBP17.81■□□□□ 0.44
SMC4-222ENST00000490207 CASP8Q14790 479 aa17.81■□□□□ 0.44
SMC4-222ENST00000490207 PLPPR5Q32ZL2 321 aa17.81■□□□□ 0.44
SMC4-222ENST00000490207 FLYWCH1Q4VC44 716 aa17.81■□□□□ 0.44
SMC4-222ENST00000490207 SPANXN4Q5MJ08 99 aa17.81■□□□□ 0.44
SMC4-222ENST00000490207 C6orf120Q7Z4R8 191 aa17.81■□□□□ 0.44
SMC4-222ENST00000490207 ANKRD46Q86W74 232 aa17.81■□□□□ 0.44
SMC4-222ENST00000490207 CLEC4FQ8N1N0 589 aa17.81■□□□□ 0.44
SMC4-222ENST00000490207 B4GALNT2Q8NHY0 566 aa17.81■□□□□ 0.44
SMC4-222ENST00000490207 PHOSPHO1Q8TCT1 267 aa17.81■□□□□ 0.44
SMC4-222ENST00000490207 ACTRT2Q8TDY3 377 aa17.81■□□□□ 0.44
SMC4-222ENST00000490207 ZBTB8AQ96BR9 441 aa17.81■□□□□ 0.44
SMC4-222ENST00000490207 PINK1Q9BXM7 581 aa17.81■□□□□ 0.44
SMC4-222ENST00000490207 HOXD1Q9GZZ0 328 aa17.81■□□□□ 0.44
SMC4-222ENST00000490207 SERHL2Q9H4I8 314 aa17.81■□□□□ 0.44
SMC4-222ENST00000490207 MED17Q9NVC6 651 aa17.81■□□□□ 0.44
SMC4-222ENST00000490207 TRPC5OSA6NMA1 111 aa17.8■□□□□ 0.44
SMC4-222ENST00000490207 E9PBE3 544 aa17.8■□□□□ 0.44
SMC4-222ENST00000490207 HDAC3O15379 428 aa17.8■□□□□ 0.44
SMC4-222ENST00000490207 SCN2BO60939 215 aa17.8■□□□□ 0.44
SMC4-222ENST00000490207 CPSF4O95639 269 aaKnown RBP17.8■□□□□ 0.44
SMC4-222ENST00000490207 KITP10721 976 aa17.8■□□□□ 0.44
SMC4-222ENST00000490207 MATN1P21941 496 aa17.8■□□□□ 0.44
SMC4-222ENST00000490207 NME5P56597 212 aa17.8■□□□□ 0.44
SMC4-222ENST00000490207 RPS3AP61247 264 aaKnown RBP17.8■□□□□ 0.44
SMC4-222ENST00000490207 ZNF117Q03924 483 aa17.8■□□□□ 0.44
SMC4-222ENST00000490207 OR2A2Q6IF42 318 aa17.8■□□□□ 0.44
SMC4-222ENST00000490207 MTERF4Q7Z6M4 381 aaKnown RBP17.8■□□□□ 0.44
SMC4-222ENST00000490207 CDH24Q86UP0 819 aa17.8■□□□□ 0.44
SMC4-222ENST00000490207 KIF18BQ86Y91 864 aa17.8■□□□□ 0.44
SMC4-222ENST00000490207 GTPBP8Q8N3Z3 284 aaPredicted RBP17.8■□□□□ 0.44
SMC4-222ENST00000490207 METTL25Q8N6Q8 603 aa17.8■□□□□ 0.44
SMC4-222ENST00000490207 VPS37AQ8NEZ2 397 aa17.8■□□□□ 0.44
SMC4-222ENST00000490207 FIG4Q92562 907 aa17.8■□□□□ 0.44
SMC4-222ENST00000490207 MANSC1Q9H8J5 431 aa17.8■□□□□ 0.44
SMC4-222ENST00000490207 AIG1Q9NVV5 245 aa17.8■□□□□ 0.44
SMC4-222ENST00000490207 CRIM1Q9NZV1 1036 aa17.8■□□□□ 0.44
SMC4-222ENST00000490207 STOML1Q9UBI4 398 aa17.8■□□□□ 0.44
SMC4-222ENST00000490207 ANKRD17O75179 2603 aaKnown RBP17.79■□□□□ 0.44
SMC4-222ENST00000490207 GOLGA8QA0A0J9YX86 632 aa17.79■□□□□ 0.44
SMC4-222ENST00000490207 PRSS51A0A1B0GVH4 220 aa17.79■□□□□ 0.44
SMC4-222ENST00000490207 A0A1W2PNV4 684 aa17.79■□□□□ 0.44
SMC4-222ENST00000490207 C7orf72A4D263 438 aa17.79■□□□□ 0.44
SMC4-222ENST00000490207 GOLGA8OA6NCC3 632 aa17.79■□□□□ 0.44
SMC4-222ENST00000490207 DUXAA6NLW8 204 aa17.79■□□□□ 0.44
SMC4-222ENST00000490207 GOLGA8NF8WBI6 632 aa17.79■□□□□ 0.44
SMC4-222ENST00000490207 H3BNH8 94 aa17.79■□□□□ 0.44
SMC4-222ENST00000490207 TNFRSF21O75509 655 aa17.79■□□□□ 0.44
SMC4-222ENST00000490207 AK1P00568 194 aa17.79■□□□□ 0.44
SMC4-222ENST00000490207 EPHA3P29320 983 aa17.79■□□□□ 0.44
SMC4-222ENST00000490207 CPA2P48052 419 aa17.79■□□□□ 0.44
SMC4-222ENST00000490207 RNF144AP50876 292 aaPredicted RBP17.79■□□□□ 0.44
SMC4-222ENST00000490207 ATP12AP54707 1039 aa17.79■□□□□ 0.44
SMC4-222ENST00000490207 EEF1A1P68104 462 aaKnown RBP17.79■□□□□ 0.44
SMC4-222ENST00000490207 PHC1P78364 1004 aa17.79■□□□□ 0.44
SMC4-222ENST00000490207 OCRLQ01968 901 aa17.79■□□□□ 0.44
SMC4-222ENST00000490207 FAM174BQ3ZCQ3 159 aa17.79■□□□□ 0.44
SMC4-222ENST00000490207 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.79■□□□□ 0.44
SMC4-222ENST00000490207 AGBL2Q5U5Z8 902 aa17.79■□□□□ 0.44
SMC4-222ENST00000490207 EEF1A1P5Q5VTE0 462 aa17.79■□□□□ 0.44
SMC4-222ENST00000490207 SPATA19Q7Z5L4 167 aa17.79■□□□□ 0.44
SMC4-222ENST00000490207 LUZP2Q86TE4 346 aa17.79■□□□□ 0.44
SMC4-222ENST00000490207 GGNQ86UU5 652 aa17.79■□□□□ 0.44
SMC4-222ENST00000490207 WDR75Q8IWA0 830 aaKnown RBP17.79■□□□□ 0.44
SMC4-222ENST00000490207 ZNF614Q8N883 585 aa17.79■□□□□ 0.44
SMC4-222ENST00000490207 ZNF845Q96IR2 970 aaPredicted RBP17.79■□□□□ 0.44
SMC4-222ENST00000490207 RNF145Q96MT1 663 aa17.79■□□□□ 0.44
SMC4-222ENST00000490207 NPAS1Q99742 590 aa17.79■□□□□ 0.44
SMC4-222ENST00000490207 RBM24Q9BX46 236 aaKnown RBP17.79■□□□□ 0.44
SMC4-222ENST00000490207 PIGMQ9H3S5 423 aa17.79■□□□□ 0.44
SMC4-222ENST00000490207 WDR55Q9H6Y2 383 aaPredicted RBP17.79■□□□□ 0.44
SMC4-222ENST00000490207 PACSIN3Q9UKS6 424 aa17.79■□□□□ 0.44
SMC4-222ENST00000490207 ZNF175Q9Y473 711 aa17.79■□□□□ 0.44
SMC4-222ENST00000490207 ANKHD1Q8IWZ3 2542 aaKnown RBP17.79■□□□□ 0.44
SMC4-222ENST00000490207 OTOGQ6ZRI0 2925 aa17.78■□□□□ 0.44
SMC4-222ENST00000490207 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.78■□□□□ 0.44
SMC4-222ENST00000490207 NPIPB9F8W1W9 429 aa17.78■□□□□ 0.44
SMC4-222ENST00000490207 SLCO1B7G3V0H7 640 aa17.78■□□□□ 0.44
SMC4-222ENST00000490207 TNFSF13O75888 250 aa17.78■□□□□ 0.44
SMC4-222ENST00000490207 UQCRC2P22695 453 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms