RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 KLK13Q9UKR3 277 aa19.18■□□□□ 0.66
SND1-214ENST00000489417 MAGED1Q9Y5V3 778 aaPredicted RBP19.18■□□□□ 0.66
SND1-214ENST00000489417 EI24O14681 340 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 TPST2O60704 377 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 GADD45GO95257 159 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 SERPINA7P05543 415 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 H1F0P07305 194 aaKnown RBP19.17■□□□□ 0.66
SND1-214ENST00000489417 GKN3PP0CG01 181 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 PRG2P13727 222 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 TMED10P49755 219 aaKnown RBP19.17■□□□□ 0.66
SND1-214ENST00000489417 AQP4P55087 323 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 SMIM11AP58511 58 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 PIN1Q13526 163 aaPredicted RBP19.17■□□□□ 0.66
SND1-214ENST00000489417 GK3PQ14409 553 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 OTUD3Q5T2D3 398 aaPredicted RBP19.17■□□□□ 0.66
SND1-214ENST00000489417 APOOLQ6UXV4 268 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 PLEKHM3Q6ZWE6 761 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 HS3ST5Q8IZT8 346 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 PIK3C3Q8NEB9 887 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 HGDQ93099 445 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 RASL10BQ96S79 203 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 FNDC11Q9BVV2 318 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 PRR14Q9BWN1 585 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 NMNAT1Q9HAN9 279 aaPredicted RBP19.17■□□□□ 0.66
SND1-214ENST00000489417 CEP250Q9BV73 2442 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 A0A1W2PQD3 144 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 CPSF4LA6NMK7 179 aaKnown RBP19.17■□□□□ 0.66
SND1-214ENST00000489417 H3BNH8 94 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 FBXO45P0C2W1 286 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 LIMS1P48059 325 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 HMGA2P52926 109 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 FBXW4P57775 412 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 TAS2R41P59536 307 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 CHAF1BQ13112 559 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 DAG1Q14118 895 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 CD226Q15762 336 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 EXOC3L2Q2M3D2 409 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 COLEC12Q5KU26 742 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 ENTPD8Q5MY95 495 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 ZNF550Q7Z398 422 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 NUP54Q7Z3B4 507 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 VASH2Q86V25 355 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 TSPYL5Q86VY4 417 aaPredicted RBP19.17■□□□□ 0.66
SND1-214ENST00000489417 OFCC1Q8IZS5 231 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 SLC5A8Q8N695 610 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 GATSQ8NAP1 163 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 POGLUT1Q8NBL1 392 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 OR52J3Q8NH60 311 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 ZNF184Q99676 751 aaPredicted RBP19.17■□□□□ 0.66
SND1-214ENST00000489417 BARD1Q99728 777 aaKnown RBP19.17■□□□□ 0.66
SND1-214ENST00000489417 POLR2J2Q9GZM3 115 aaKnown RBP19.17■□□□□ 0.66
SND1-214ENST00000489417 GABARAPL1Q9H0R8 117 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 POLR2J3Q9H1A7 115 aaKnown RBP19.17■□□□□ 0.66
SND1-214ENST00000489417 CDCP1Q9H5V8 836 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 CTPS2Q9NRF8 586 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 WDR70Q9NW82 654 aa19.17■□□□□ 0.66
SND1-214ENST00000489417 TESQ9UGI8 421 aaKnown RBP19.17■□□□□ 0.66
SND1-214ENST00000489417 ALG1L2C9J202 215 aa19.16■□□□□ 0.66
SND1-214ENST00000489417 H0YJX3 145 aa19.16■□□□□ 0.66
SND1-214ENST00000489417 FADS1O60427 444 aa19.16■□□□□ 0.66
SND1-214ENST00000489417 FMO6PO60774 539 aa19.16■□□□□ 0.66
SND1-214ENST00000489417 ITGA10O75578 1167 aa19.16■□□□□ 0.66
SND1-214ENST00000489417 UBTFL6P0CB48 400 aaPredicted RBP19.16■□□□□ 0.66
SND1-214ENST00000489417 UBL4AP11441 157 aa19.16■□□□□ 0.66
SND1-214ENST00000489417 IFNA8P32881 189 aa19.16■□□□□ 0.66
SND1-214ENST00000489417 LAPTM4AQ15012 233 aa19.16■□□□□ 0.66
SND1-214ENST00000489417 NDUFAF6Q330K2 333 aa19.16■□□□□ 0.66
SND1-214ENST00000489417 TBC1D25Q3MII6 688 aa19.16■□□□□ 0.66
SND1-214ENST00000489417 FCRLBQ6BAA4 426 aa19.16■□□□□ 0.66
SND1-214ENST00000489417 RPS19BP1Q86WX3 136 aaKnown RBP19.16■□□□□ 0.66
SND1-214ENST00000489417 ZNF440Q8IYI8 595 aa19.16■□□□□ 0.66
SND1-214ENST00000489417 ARMC10Q8N2F6 343 aa19.16■□□□□ 0.66
SND1-214ENST00000489417 FAM71CQ8NEG0 241 aa19.16■□□□□ 0.66
SND1-214ENST00000489417 PHOSPHO1Q8TCT1 267 aa19.16■□□□□ 0.66
SND1-214ENST00000489417 DNAJC9Q8WXX5 260 aa19.16■□□□□ 0.66
SND1-214ENST00000489417 TTC9Q92623 222 aa19.16■□□□□ 0.66
SND1-214ENST00000489417 TMCO6Q96DC7 493 aa19.16■□□□□ 0.66
SND1-214ENST00000489417 TBL1XR1Q9BZK7 514 aa19.16■□□□□ 0.66
SND1-214ENST00000489417 RYDENQ9NUL5 291 aaKnown RBP19.16■□□□□ 0.66
SND1-214ENST00000489417 PDP1Q9P0J1 537 aaPredicted RBP19.16■□□□□ 0.66
SND1-214ENST00000489417 NTNG1Q9Y2I2 539 aa19.16■□□□□ 0.66
SND1-214ENST00000489417 YARS2Q9Y2Z4 477 aaKnown RBP19.16■□□□□ 0.66
SND1-214ENST00000489417 CYP7B1O75881 506 aa19.15■□□□□ 0.66
SND1-214ENST00000489417 OR5F1O95221 314 aa19.15■□□□□ 0.66
SND1-214ENST00000489417 HPRP00739 348 aa19.15■□□□□ 0.66
SND1-214ENST00000489417 ENDOUP21128 410 aaKnown RBP19.15■□□□□ 0.66
SND1-214ENST00000489417 FUT4P22083 530 aa19.15■□□□□ 0.66
SND1-214ENST00000489417 PRKACGP22612 351 aa19.15■□□□□ 0.66
SND1-214ENST00000489417 EVI2BP34910 448 aa19.15■□□□□ 0.66
SND1-214ENST00000489417 ALDH3A2P51648 485 aa19.15■□□□□ 0.66
SND1-214ENST00000489417 MLF1P58340 268 aa19.15■□□□□ 0.66
SND1-214ENST00000489417 FGD3Q5JSP0 725 aa19.15■□□□□ 0.66
SND1-214ENST00000489417 OR5M3Q8NGP4 307 aa19.15■□□□□ 0.66
SND1-214ENST00000489417 MAGEE2Q8TD90 523 aaPredicted RBP19.15■□□□□ 0.66
SND1-214ENST00000489417 GIPC3Q8TF64 312 aa19.15■□□□□ 0.66
SND1-214ENST00000489417 SPACA9Q96E40 222 aaPredicted RBP19.15■□□□□ 0.66
SND1-214ENST00000489417 ALPK1Q96QP1 1244 aa19.15■□□□□ 0.66
SND1-214ENST00000489417 NODALQ96S42 347 aa19.15■□□□□ 0.66
SND1-214ENST00000489417 ZNF559Q9BR84 538 aa19.15■□□□□ 0.66
SND1-214ENST00000489417 OSBPL10Q9BXB5 764 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms