RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 SF3B4Q15427 424 aaKnown RBP eCLIP21.43■■□□□ 1.02
RHBDD3-205ENST00000488106 RIPPLY2Q5TAB7 128 aa21.43■■□□□ 1.02
RHBDD3-205ENST00000488106 ARSKQ6UWY0 536 aa21.43■■□□□ 1.02
RHBDD3-205ENST00000488106 ZNF621Q6ZSS3 439 aa21.43■■□□□ 1.02
RHBDD3-205ENST00000488106 UBQLNLQ8IYU4 475 aa21.43■■□□□ 1.02
RHBDD3-205ENST00000488106 TRIML2Q8N7C3 387 aa21.43■■□□□ 1.02
RHBDD3-205ENST00000488106 TNIP2Q8NFZ5 429 aa21.43■■□□□ 1.02
RHBDD3-205ENST00000488106 LILRB4Q8NHJ6 448 aa21.43■■□□□ 1.02
RHBDD3-205ENST00000488106 PHOSPHO1Q8TCT1 267 aa21.43■■□□□ 1.02
RHBDD3-205ENST00000488106 MIPOL1Q8TD10 442 aa21.43■■□□□ 1.02
RHBDD3-205ENST00000488106 UQCRHLA0A096LP55 91 aa21.42■■□□□ 1.02
RHBDD3-205ENST00000488106 OR2M5A3KFT3 312 aa21.42■■□□□ 1.02
RHBDD3-205ENST00000488106 H3BML4 177 aa21.42■■□□□ 1.02
RHBDD3-205ENST00000488106 RFXANKO14593 260 aa21.42■■□□□ 1.02
RHBDD3-205ENST00000488106 HCRTR2O43614 444 aa21.42■■□□□ 1.02
RHBDD3-205ENST00000488106 TOXO94900 526 aa21.42■■□□□ 1.02
RHBDD3-205ENST00000488106 AK1P00568 194 aa21.42■■□□□ 1.02
RHBDD3-205ENST00000488106 ZNF708P17019 499 aa21.42■■□□□ 1.02
RHBDD3-205ENST00000488106 CLDN18P56856 261 aa21.42■■□□□ 1.02
RHBDD3-205ENST00000488106 LRRC74AQ0VAA2 488 aa21.42■■□□□ 1.02
RHBDD3-205ENST00000488106 GPR68Q15743 365 aa21.42■■□□□ 1.02
RHBDD3-205ENST00000488106 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.42■■□□□ 1.02
RHBDD3-205ENST00000488106 ATAD3BQ5T9A4 648 aa21.42■■□□□ 1.02
RHBDD3-205ENST00000488106 NSUN5P2Q63ZY6 315 aa21.42■■□□□ 1.02
RHBDD3-205ENST00000488106 PLXDC2Q6UX71 529 aa21.42■■□□□ 1.02
RHBDD3-205ENST00000488106 RNF130Q86XS8 419 aa21.42■■□□□ 1.02
RHBDD3-205ENST00000488106 MISPQ8IVT2 679 aa21.42■■□□□ 1.02
RHBDD3-205ENST00000488106 NAXEQ8NCW5 288 aa21.42■■□□□ 1.02
RHBDD3-205ENST00000488106 CHDHQ8NE62 594 aaPredicted RBP21.42■■□□□ 1.02
RHBDD3-205ENST00000488106 PNPT1Q8TCS8 783 aaKnown RBP21.42■■□□□ 1.02
RHBDD3-205ENST00000488106 XAGE5Q8WWM1 108 aa21.42■■□□□ 1.02
RHBDD3-205ENST00000488106 SMPDL3BQ92485 455 aa21.42■■□□□ 1.02
RHBDD3-205ENST00000488106 MARVELD3Q96A59 401 aa21.42■■□□□ 1.02
RHBDD3-205ENST00000488106 HOXD1Q9GZZ0 328 aa21.42■■□□□ 1.02
RHBDD3-205ENST00000488106 HHATLQ9HCP6 504 aa21.42■■□□□ 1.02
RHBDD3-205ENST00000488106 EXD2Q9NVH0 621 aa21.42■■□□□ 1.02
RHBDD3-205ENST00000488106 TEX15Q9BXT5 2789 aa21.42■■□□□ 1.02
RHBDD3-205ENST00000488106 TNFRSF21O75509 655 aa21.41■■□□□ 1.02
RHBDD3-205ENST00000488106 ATP12AP54707 1039 aa21.41■■□□□ 1.02
RHBDD3-205ENST00000488106 ZNF117Q03924 483 aa21.41■■□□□ 1.02
RHBDD3-205ENST00000488106 NDUFAF6Q330K2 333 aa21.41■■□□□ 1.02
RHBDD3-205ENST00000488106 ARHGAP11BQ3KRB8 267 aa21.41■■□□□ 1.02
RHBDD3-205ENST00000488106 LIX1LQ8IVB5 337 aa21.41■■□□□ 1.02
RHBDD3-205ENST00000488106 B4GALNT2Q8NHY0 566 aa21.41■■□□□ 1.02
RHBDD3-205ENST00000488106 ZPLD1Q8TCW7 415 aa21.41■■□□□ 1.02
RHBDD3-205ENST00000488106 VPS33AQ96AX1 596 aa21.41■■□□□ 1.02
RHBDD3-205ENST00000488106 KLHDC3Q9BQ90 382 aa21.41■■□□□ 1.02
RHBDD3-205ENST00000488106 PIGQQ9BRB3 760 aa21.41■■□□□ 1.02
RHBDD3-205ENST00000488106 CCDC28BQ9BUN5 200 aa21.41■■□□□ 1.02
RHBDD3-205ENST00000488106 KCNJ16Q9NPI9 418 aa21.41■■□□□ 1.02
RHBDD3-205ENST00000488106 SLC6A13Q9NSD5 602 aa21.41■■□□□ 1.02
RHBDD3-205ENST00000488106 MKLN1Q9UL63 735 aa21.41■■□□□ 1.02
RHBDD3-205ENST00000488106 MPDZO75970 2070 aa21.41■■□□□ 1.02
RHBDD3-205ENST00000488106 APCP25054 2843 aa21.4■■□□□ 1.02
RHBDD3-205ENST00000488106 FAM234BA2RU67 622 aa21.4■■□□□ 1.02
RHBDD3-205ENST00000488106 CD8B2A6NJW9 211 aa21.4■■□□□ 1.02
RHBDD3-205ENST00000488106 CLCA1A8K7I4 914 aa21.4■■□□□ 1.02
RHBDD3-205ENST00000488106 NPIPB9F8W1W9 429 aa21.4■■□□□ 1.02
RHBDD3-205ENST00000488106 H3BNH8 94 aa21.4■■□□□ 1.02
RHBDD3-205ENST00000488106 SEC14L5O43304 696 aa21.4■■□□□ 1.02
RHBDD3-205ENST00000488106 HNRNPRO43390 633 aaKnown RBP21.4■■□□□ 1.02
RHBDD3-205ENST00000488106 OIP5O43482 229 aa21.4■■□□□ 1.02
RHBDD3-205ENST00000488106 FCMRO60667 390 aa21.4■■□□□ 1.02
RHBDD3-205ENST00000488106 STX11O75558 287 aa21.4■■□□□ 1.02
RHBDD3-205ENST00000488106 AGR2O95994 175 aa21.4■■□□□ 1.02
RHBDD3-205ENST00000488106 COX6B1P14854 86 aa21.4■■□□□ 1.02
RHBDD3-205ENST00000488106 MSX1P28360 303 aa21.4■■□□□ 1.02
RHBDD3-205ENST00000488106 ZNF41P51814 821 aaPredicted RBP21.4■■□□□ 1.02
RHBDD3-205ENST00000488106 FUT5Q11128 374 aa21.4■■□□□ 1.02
RHBDD3-205ENST00000488106 KLHL26Q53HC5 615 aa21.4■■□□□ 1.02
RHBDD3-205ENST00000488106 PDZK1Q5T2W1 519 aa21.4■■□□□ 1.02
RHBDD3-205ENST00000488106 HEPHL1Q6MZM0 1159 aa21.4■■□□□ 1.02
RHBDD3-205ENST00000488106 TMCO5AQ8N6Q1 288 aa21.4■■□□□ 1.02
RHBDD3-205ENST00000488106 ZNF350Q9GZX5 532 aa21.4■■□□□ 1.02
RHBDD3-205ENST00000488106 RMND5AQ9H871 391 aa21.4■■□□□ 1.02
RHBDD3-205ENST00000488106 ZNF337Q9Y3M9 751 aa21.4■■□□□ 1.02
RHBDD3-205ENST00000488106 DTNAQ9Y4J8 743 aa21.4■■□□□ 1.02
RHBDD3-205ENST00000488106 CENPVL1A0A0U1RR11 272 aa21.39■■□□□ 1.01
RHBDD3-205ENST00000488106 HSPB2A8KAH6 182 aa21.39■■□□□ 1.01
RHBDD3-205ENST00000488106 ANP32DO95626 131 aa21.39■■□□□ 1.01
RHBDD3-205ENST00000488106 NUDT14O95848 222 aa21.39■■□□□ 1.01
RHBDD3-205ENST00000488106 IL2RAP01589 272 aa21.39■■□□□ 1.01
RHBDD3-205ENST00000488106 PEPDP12955 493 aa21.39■■□□□ 1.01
RHBDD3-205ENST00000488106 HPCAP84074 193 aa21.39■■□□□ 1.01
RHBDD3-205ENST00000488106 HSPB2Q16082 182 aa21.39■■□□□ 1.01
RHBDD3-205ENST00000488106 C6orf10Q5SRN2 563 aa21.39■■□□□ 1.01
RHBDD3-205ENST00000488106 MTERF4Q7Z6M4 381 aaKnown RBP21.39■■□□□ 1.01
RHBDD3-205ENST00000488106 C9orf106Q8NAJ2 232 aa21.39■■□□□ 1.01
RHBDD3-205ENST00000488106 ROPN1LQ96C74 230 aa21.39■■□□□ 1.01
RHBDD3-205ENST00000488106 ITCHQ96J02 903 aa21.39■■□□□ 1.01
RHBDD3-205ENST00000488106 NMUR2Q9GZQ4 415 aa21.39■■□□□ 1.01
RHBDD3-205ENST00000488106 CALHM2Q9HA72 323 aa21.39■■□□□ 1.01
RHBDD3-205ENST00000488106 NPHS2Q9NP85 383 aa21.39■■□□□ 1.01
RHBDD3-205ENST00000488106 MED17Q9NVC6 651 aa21.39■■□□□ 1.01
RHBDD3-205ENST00000488106 DCTN4Q9UJW0 460 aa21.39■■□□□ 1.01
RHBDD3-205ENST00000488106 CARD8Q9Y2G2 431 aa21.39■■□□□ 1.01
RHBDD3-205ENST00000488106 ANKHD1Q8IWZ3 2542 aaKnown RBP21.39■■□□□ 1.01
RHBDD3-205ENST00000488106 LRBAP50851 2863 aa21.38■■□□□ 1.01
RHBDD3-205ENST00000488106 MBD3L4A6NDZ8 208 aaPredicted RBP21.38■■□□□ 1.01
RHBDD3-205ENST00000488106 MBD3L3A6NE82 208 aaPredicted RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms