RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 UPK1AO00322 258 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 CTDSP2O14595 271 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 TLX3O43711 291 aaPredicted RBP11.04□□□□□ -0.64
TRA2B-214ENST00000487615 SCO2O43819 266 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 PAPLNO95428 1278 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 SCG5P05408 212 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 PBX2P40425 430 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 PXNP49023 591 aaPredicted RBP11.04□□□□□ -0.64
TRA2B-214ENST00000487615 C21orf58P58505 322 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 PPP2CBP62714 309 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 PPP2CAP67775 309 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 NSDHLQ15738 373 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 FBXL6Q8N531 539 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 OR4F15Q8NGB8 312 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 SPRYD4Q8WW59 207 aaPredicted RBP11.04□□□□□ -0.64
TRA2B-214ENST00000487615 EVA1AQ9H8M9 152 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 DIABLOQ9NR28 239 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 MED17Q9NVC6 651 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 SESN1Q9Y6P5 492 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 MGAMO43451 1857 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 ZAR1LA6NP61 321 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 C11orf98E9PRG8 122 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 RNF13O43567 381 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 CD38P28907 300 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 NUP62P37198 522 aaPredicted RBP11.03□□□□□ -0.64
TRA2B-214ENST00000487615 C3orf38Q5JPI3 329 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 KRT77Q7Z794 578 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 TMEM151BQ8IW70 566 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 RNF113BQ8IZP6 322 aaKnown RBP11.03□□□□□ -0.64
TRA2B-214ENST00000487615 OR51L1Q8NGJ5 315 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 TMEM234Q8WY98 164 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 RFT1Q96AA3 541 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 PRR14Q9BWN1 585 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 ELL3Q9HB65 397 aaPredicted RBP11.03□□□□□ -0.64
TRA2B-214ENST00000487615 SLC52A3Q9NQ40 469 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 KCMF1Q9P0J7 381 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 DAPP1Q9UN19 280 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 SLC17A4Q9Y2C5 497 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 SNX11Q9Y5W9 270 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 PMF1-BGLAPU3KQ54 211 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 MYOFQ9NZM1 2061 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 A0A1W2PPK0 400 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 IL1AP01583 271 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 CAPNS1P04632 268 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 YES1P07947 543 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 PGCP20142 388 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 FCRLBQ6BAA4 426 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 ULK3Q6PHR2 472 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 MBOAT2Q6ZWT7 520 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 PARP16Q8N5Y8 322 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 C15orf40Q8WUR7 153 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 ZNF582Q96NG8 517 aaPredicted RBP11.03□□□□□ -0.64
TRA2B-214ENST00000487615 SRA1Q9HD15 236 aaKnown RBP11.03□□□□□ -0.64
TRA2B-214ENST00000487615 CENPMQ9NSP4 180 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 DIMT1Q9UNQ2 313 aaKnown RBP11.03□□□□□ -0.64
TRA2B-214ENST00000487615 OR6C70A6NIJ9 312 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 C17orf105B2RV13 164 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 NPIPA5E9PKD4 350 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 SOX1O00570 391 aaPredicted RBP11.03□□□□□ -0.64
TRA2B-214ENST00000487615 PPM1DO15297 605 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 PRKCDQ05655 676 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 DEFB133Q30KQ1 61 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 PHF19Q5T6S3 580 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 BCL2L10Q9HD36 194 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 SDHAF3Q9NRP4 125 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 SERGEFQ9UGK8 458 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 NPIPA1Q9UND3 350 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 HS3ST3A1Q9Y663 406 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 TMEM14AQ9Y6G1 99 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 DPM1O60762 260 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 FUT1P19526 365 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 TEAD1P28347 426 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 TNFSF8P32971 234 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 LIM2P55344 173 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 Q6ZNX1 250 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 ATCAYQ86WG3 371 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 RASGRP3Q8IV61 690 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 C19orf47Q8N9M1 422 aaKnown RBP11.03□□□□□ -0.64
TRA2B-214ENST00000487615 SLC37A2Q8TED4 501 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 THRSPQ92748 146 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 GMEB2Q9UKD1 530 aa11.03□□□□□ -0.64
TRA2B-214ENST00000487615 ARRDC5A6NEK1 342 aa11.02□□□□□ -0.64
TRA2B-214ENST00000487615 BMP1P13497 986 aa11.02□□□□□ -0.64
TRA2B-214ENST00000487615 SOX2P48431 317 aa11.02□□□□□ -0.64
TRA2B-214ENST00000487615 XKRXQ6PP77 449 aa11.02□□□□□ -0.64
TRA2B-214ENST00000487615 BCDIN3DQ7Z5W3 292 aaKnown RBP11.02□□□□□ -0.64
TRA2B-214ENST00000487615 LRRC56Q8IYG6 542 aaPredicted RBP11.02□□□□□ -0.64
TRA2B-214ENST00000487615 GPER1Q99527 375 aa11.02□□□□□ -0.64
TRA2B-214ENST00000487615 RXFP3Q9NSD7 469 aa11.02□□□□□ -0.64
TRA2B-214ENST00000487615 TRPM7Q96QT4 1865 aa11.02□□□□□ -0.64
TRA2B-214ENST00000487615 PATJQ8NI35 1801 aa11.02□□□□□ -0.65
TRA2B-214ENST00000487615 TRAV27A0A087WT01 109 aa11.02□□□□□ -0.65
TRA2B-214ENST00000487615 A0A087WUU8 490 aa11.02□□□□□ -0.65
TRA2B-214ENST00000487615 FAM172BPA6NC97 362 aa11.02□□□□□ -0.65
TRA2B-214ENST00000487615 INMT-MINDY4F8WBC2 141 aa11.02□□□□□ -0.65
TRA2B-214ENST00000487615 HEXBP07686 556 aa11.02□□□□□ -0.65
TRA2B-214ENST00000487615 FPR3P25089 353 aa11.02□□□□□ -0.65
TRA2B-214ENST00000487615 DRD3P35462 400 aa11.02□□□□□ -0.65
TRA2B-214ENST00000487615 PRPS1P60891 318 aa11.02□□□□□ -0.65
TRA2B-214ENST00000487615 ODF4Q2M2E3 257 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms