RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 CLEC4FQ8N1N0 589 aa10.32□□□□□ -0.76
SPEN-205ENST00000487496 GTPBP8Q8N3Z3 284 aaPredicted RBP10.32□□□□□ -0.76
SPEN-205ENST00000487496 OR5D16Q8NGK9 328 aa10.32□□□□□ -0.76
SPEN-205ENST00000487496 ACTRT2Q8TDY3 377 aa10.32□□□□□ -0.76
SPEN-205ENST00000487496 FIG4Q92562 907 aa10.32□□□□□ -0.76
SPEN-205ENST00000487496 TESCQ96BS2 214 aa10.32□□□□□ -0.76
SPEN-205ENST00000487496 SH3YL1Q96HL8 342 aaPredicted RBP10.32□□□□□ -0.76
SPEN-205ENST00000487496 ZNF845Q96IR2 970 aaPredicted RBP10.32□□□□□ -0.76
SPEN-205ENST00000487496 OR7D2Q96RA2 312 aa10.32□□□□□ -0.76
SPEN-205ENST00000487496 HOXD1Q9GZZ0 328 aa10.32□□□□□ -0.76
SPEN-205ENST00000487496 SERHL2Q9H4I8 314 aa10.32□□□□□ -0.76
SPEN-205ENST00000487496 PCDHGB4Q9UN71 923 aa10.32□□□□□ -0.76
SPEN-205ENST00000487496 AP4B1Q9Y6B7 739 aa10.32□□□□□ -0.76
SPEN-205ENST00000487496 NUP214P35658 2090 aaPredicted RBP10.32□□□□□ -0.76
SPEN-205ENST00000487496 DCHS2Q6V1P9 2916 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 CSMD2Q7Z408 3487 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 NPIPA5A0A0B4J1W7 369 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 RNF103-CHMP3A0A140T963 221 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 A0A1W2PNV4 684 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 C7orf72A4D263 438 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 DUXAA6NLW8 204 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 NPIPA7E9PJI5 369 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 NPIPB9F8W1W9 429 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 SDHDO14521 159 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 CTAG2O75638 210 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 TNFSF13O75888 250 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 CRHP06850 196 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 ALDOCP09972 364 aaKnown RBP10.31□□□□□ -0.76
SPEN-205ENST00000487496 NPIPA8P0DM63 369 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 ZNF17P17021 662 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 MATN1P21941 496 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 PSMA4P25789 261 aaKnown RBP10.31□□□□□ -0.76
SPEN-205ENST00000487496 RPS3AP61247 264 aaKnown RBP10.31□□□□□ -0.76
SPEN-205ENST00000487496 OCRLQ01968 901 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 PLPPR5Q32ZL2 321 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 FLYWCH1Q4VC44 716 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 SPANXN4Q5MJ08 99 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.31□□□□□ -0.76
SPEN-205ENST00000487496 ANXA8L1Q5VT79 327 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 ATG16L1Q676U5 607 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 OR2A2Q6IF42 318 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 CBLN3Q6UW01 205 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 MTERF4Q7Z6M4 381 aaKnown RBP10.31□□□□□ -0.76
SPEN-205ENST00000487496 LUZP2Q86TE4 346 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 CDH24Q86UP0 819 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 GGNQ86UU5 652 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 TMEM200AQ86VY9 491 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 KIF18BQ86Y91 864 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 WDR75Q8IWA0 830 aaKnown RBP10.31□□□□□ -0.76
SPEN-205ENST00000487496 METTL25Q8N6Q8 603 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 VPS37AQ8NEZ2 397 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 OR4A15Q8NGL6 344 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 B4GALNT2Q8NHY0 566 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 FNDC9Q8TBE3 224 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 RAB3IL1Q8TBN0 382 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 PHOSPHO1Q8TCT1 267 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 FAM222BQ8WU58 562 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 SMPDL3BQ92485 455 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 ZBTB8AQ96BR9 441 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 TEX37Q96LM6 180 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 SDF2Q99470 211 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 NPAS1Q99742 590 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 KLHDC3Q9BQ90 382 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 PINK1Q9BXM7 581 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 PIGMQ9H3S5 423 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 MANSC1Q9H8J5 431 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 MED17Q9NVC6 651 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 NKIRAS1Q9NYS0 192 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 MARCOQ9UEW3 520 aaPredicted RBP10.31□□□□□ -0.76
SPEN-205ENST00000487496 ZNF175Q9Y473 711 aa10.31□□□□□ -0.76
SPEN-205ENST00000487496 FAM221AA4D161 298 aa10.3□□□□□ -0.76
SPEN-205ENST00000487496 TUBAL3A6NHL2 446 aa10.3□□□□□ -0.76
SPEN-205ENST00000487496 A8MXE2 369 aa10.3□□□□□ -0.76
SPEN-205ENST00000487496 E9PBE3 544 aa10.3□□□□□ -0.76
SPEN-205ENST00000487496 H3BNH8 94 aa10.3□□□□□ -0.76
SPEN-205ENST00000487496 HDAC3O15379 428 aa10.3□□□□□ -0.76
SPEN-205ENST00000487496 OIP5O43482 229 aa10.3□□□□□ -0.76
SPEN-205ENST00000487496 CPSF4O95639 269 aaKnown RBP10.3□□□□□ -0.76
SPEN-205ENST00000487496 LINGO3P0C6S8 592 aa10.3□□□□□ -0.76
SPEN-205ENST00000487496 UQCRC2P22695 453 aa10.3□□□□□ -0.76
SPEN-205ENST00000487496 EPHA3P29320 983 aa10.3□□□□□ -0.76
SPEN-205ENST00000487496 RNF144AP50876 292 aaPredicted RBP10.3□□□□□ -0.76
SPEN-205ENST00000487496 ZNF41P51814 821 aaPredicted RBP10.3□□□□□ -0.76
SPEN-205ENST00000487496 CLNS1AP54105 237 aaKnown RBP10.3□□□□□ -0.76
SPEN-205ENST00000487496 ATP12AP54707 1039 aa10.3□□□□□ -0.76
SPEN-205ENST00000487496 NME5P56597 212 aa10.3□□□□□ -0.76
SPEN-205ENST00000487496 UFM1P61960 85 aa10.3□□□□□ -0.76
SPEN-205ENST00000487496 RAC1P63000 192 aa10.3□□□□□ -0.76
SPEN-205ENST00000487496 SORDQ00796 357 aa10.3□□□□□ -0.76
SPEN-205ENST00000487496 ZNF117Q03924 483 aa10.3□□□□□ -0.76
SPEN-205ENST00000487496 CASP8Q14790 479 aa10.3□□□□□ -0.76
SPEN-205ENST00000487496 PON3Q15166 354 aa10.3□□□□□ -0.76
SPEN-205ENST00000487496 SGCBQ16585 318 aa10.3□□□□□ -0.76
SPEN-205ENST00000487496 DPY19L1Q2PZI1 675 aa10.3□□□□□ -0.76
SPEN-205ENST00000487496 FAM174BQ3ZCQ3 159 aa10.3□□□□□ -0.76
SPEN-205ENST00000487496 SPATA19Q7Z5L4 167 aa10.3□□□□□ -0.76
SPEN-205ENST00000487496 ZNF527Q8NB42 609 aa10.3□□□□□ -0.76
SPEN-205ENST00000487496 LINC01560Q8TB33 94 aa10.3□□□□□ -0.76
SPEN-205ENST00000487496 POC1BQ8TC44 478 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms