RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 RENP00797 406 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 IGHV3-13P01766 116 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 MELTFP08582 738 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 HOXB7P09629 217 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 FAM200BP0CF97 657 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 GSTT2P0CG29 244 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 GSTT2BP0CG30 244 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 DPP4P27487 766 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 VEGFCP49767 419 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 ZP4Q12836 540 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 C14orf28Q4W4Y0 310 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 PNCKQ6P2M8 343 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 LEG1Q6P5S2 330 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 Q7L0L9 218 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 NET1Q7Z628 596 aaPredicted RBP3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 TSEN54Q7Z6J9 526 aaKnown RBP3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 SLC47A2Q86VL8 602 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 HSCBQ8IWL3 235 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 CCDC36Q8IYA8 594 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 GCNT2Q8N0V5 402 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 CSNK1G2-AS1Q8NCQ2 148 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 MAPK1IP1LQ8NDC0 245 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 C17orf47Q8NEP4 570 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 NFAM1Q8NET5 270 aaPredicted RBP3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 BEST4Q8NFU0 473 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 FLVCR1-AS1Q8TAF5 88 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 SYAP1Q96A49 352 aaPredicted RBP3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 PINX1Q96BK5 328 aaKnown RBP3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 CARD6Q9BX69 1037 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 CENPMQ9NSP4 180 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 DCAF13Q9NV06 445 aaKnown RBP3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 KLRF1Q9NZS2 232 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 PAK5Q9P286 719 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 ATP6V1HQ9UI12 483 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 KLK13Q9UKR3 277 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 DHRS7Q9Y394 339 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 MFHAS1Q9Y4C4 1052 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 SPTBN5Q9NRC6 3674 aaKnown RBP3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 VCANP13611 3396 aa3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 MFSD2BA6NFX1 497 aa3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 ACOD1A6NK06 481 aa3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 WASH3PC4AMC7 463 aa3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 SDHDO14521 159 aa3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 TYROBPO43914 113 aa3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 GALR3O60755 368 aaPredicted RBP3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 NOL3O60936 208 aaKnown RBP3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 OR4F21O95013 312 aa3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 HOXD4P09016 255 aaPredicted RBP3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 RPS12P25398 132 aaKnown RBP3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 AXLP30530 894 aa3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 ACAA2P42765 397 aaKnown RBP3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 POU3F4P49335 361 aa3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 ZNF33BQ06732 778 aa3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 ABRAXAS2Q15018 415 aa3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 TRIP10Q15642 601 aa3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 C17orf58Q2M2W7 97 aa3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 VWA2Q5GFL6 755 aa3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 WASH2PQ6VEQ5 465 aa3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 TMUB2Q71RG4 321 aa3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 LHFPL4Q7Z7J7 247 aa3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 ZNF573Q86YE8 665 aa3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 RASL10AQ92737 203 aa3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 ART4Q93070 314 aa3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 RBM18Q96H35 190 aaKnown RBP3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 VSTM2LQ96N03 204 aa3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 DUS2Q9NX74 493 aaKnown RBP3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 CHMP2BQ9UQN3 213 aa3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 A0A1B0GUL6 1792 aa3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 MAP3K15Q6ZN16 1313 aa3.94□□□□□ -1.78
PRPF38A-203ENST00000487160 PRUNE2Q8WUY3 3088 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 ARAP2Q8WZ64 1704 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 CACNA1FO60840 1977 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 FBLL1A6NHQ2 334 aaKnown RBP3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 ERVV-1B6SEH8 477 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 NDC80O14777 642 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 LRRTM2O43300 516 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 VENTXO95231 258 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 KRT6BP04259 564 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 WNT2P09544 360 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 CALCBP10092 127 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 TNNI3P19429 210 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 CYLC1P35663 651 aaPredicted RBP3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 KRT6CP48668 564 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 CSRP3P50461 194 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 ARHGDIAP52565 204 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 TRA2BP62995 288 aaKnown RBP3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 TFDP1Q14186 410 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 EIF2B1Q14232 305 aaKnown RBP3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 CDKN3Q16667 212 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 CNPY1Q3B7I2 92 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 NHLRC3Q5JS37 347 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 SULT1C3Q6IMI6 304 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 KRTAP5-3Q6L8H2 238 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 SLC39A4Q6P5W5 647 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 HACD2Q6Y1H2 254 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 SLC25A42Q86VD7 318 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 CBWD2Q8IUF1 395 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 EFCAB13Q8IY85 973 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 ARL14Q8N4G2 192 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 CRYGNQ8WXF5 182 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms