RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 CSTAP01040 98 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 ETFAP13804 333 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 UQCRBP14927 111 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 HOXB9P17482 250 aaPredicted RBP13.3□□□□□ -0.28
LIMS3-205ENST00000487150 HK1P19367 917 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 ACVR2AP27037 513 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 P2RX1P51575 399 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 MVDP53602 400 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 CASP9P55211 416 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 BCL2A1Q16548 175 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 GTDC1Q4AE62 458 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 LIN52Q52LA3 116 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 PAGE3Q5JUK9 113 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 WIPI1Q5MNZ9 446 aaPredicted RBP13.3□□□□□ -0.28
LIMS3-205ENST00000487150 COX20Q5RI15 118 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 PDZK1Q5T2W1 519 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 GCNT6Q5T4J0 391 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 VASNQ6EMK4 673 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 TYW3Q6IPR3 259 aaKnown RBP13.3□□□□□ -0.28
LIMS3-205ENST00000487150 APOOLQ6UXV4 268 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 FRRS1Q6ZNA5 592 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 FGD2Q7Z6J4 655 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 YRDCQ86U90 279 aaKnown RBP13.3□□□□□ -0.28
LIMS3-205ENST00000487150 FJX1Q86VR8 437 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 DOLPP1Q86YN1 238 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 SLC30A8Q8IWU4 369 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 TMCO5AQ8N6Q1 288 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 GATSQ8NAP1 163 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 AURKBQ96GD4 344 aaPredicted RBP13.3□□□□□ -0.28
LIMS3-205ENST00000487150 ELAC2Q9BQ52 826 aaKnown RBP13.3□□□□□ -0.28
LIMS3-205ENST00000487150 PRDM14Q9GZV8 571 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.3□□□□□ -0.28
LIMS3-205ENST00000487150 SLC6A13Q9NSD5 602 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 FBXO34Q9NWN3 711 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 MED11Q9P086 117 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 SPRR3Q9UBC9 169 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 MKLN1Q9UL63 735 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 MEMO1Q9Y316 297 aa13.3□□□□□ -0.28
LIMS3-205ENST00000487150 MYO18BQ8IUG5 2567 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 TRBV5-3A0A0A0MS03 114 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 A0A0G2JPF8 293 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 AGAP5A6NIR3 686 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 HNRNPCL2B2RXH8 293 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 HNRNPCL3B7ZW38 293 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 ADAM10O14672 748 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 HNRNPCL1O60812 293 aaKnown RBP13.29□□□□□ -0.28
LIMS3-205ENST00000487150 UGT2B17O75795 530 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 NUDT14O95848 222 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 BCHEP06276 602 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 DBIP07108 87 aaKnown RBP13.29□□□□□ -0.28
LIMS3-205ENST00000487150 HNRNPCL4P0DMR1 293 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 AGAP20933 346 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 DRD4P21917 467 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 ME2P23368 584 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 ELK4P28324 431 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 SLC6A8P48029 635 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 SEC24CP53992 1094 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 EEFSECP57772 596 aaKnown RBP13.29□□□□□ -0.28
LIMS3-205ENST00000487150 CRYZQ08257 329 aaKnown RBP13.29□□□□□ -0.28
LIMS3-205ENST00000487150 FUT5Q11128 374 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 CBFBQ13951 182 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 LARS2Q15031 903 aaKnown RBP13.29□□□□□ -0.28
LIMS3-205ENST00000487150 CD226Q15762 336 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 GXYLT1Q4G148 440 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 EIPR1Q53HC9 387 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 B3GNT6Q6ZMB0 384 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 ARPINQ7Z6K5 226 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 KRT73Q86Y46 540 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 ZNF440Q8IYI8 595 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 RP9Q8TA86 221 aaKnown RBP13.29□□□□□ -0.28
LIMS3-205ENST00000487150 BBS10Q8TAM1 723 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 CGREF1Q99674 301 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 CPPED1Q9BRF8 314 aaPredicted RBP13.29□□□□□ -0.28
LIMS3-205ENST00000487150 SPATA9Q9BWV2 254 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 SLC38A1Q9H2H9 487 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 TMEM38AQ9H6F2 299 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 EXOSC3Q9NQT5 275 aaKnown RBP13.29□□□□□ -0.28
LIMS3-205ENST00000487150 SLC25A37Q9NYZ2 338 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 VAPAQ9P0L0 249 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 SH3BGRL2Q9UJC5 107 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 ERRFI1Q9UJM3 462 aaPredicted RBP13.29□□□□□ -0.28
LIMS3-205ENST00000487150 AP3M1Q9Y2T2 418 aa13.29□□□□□ -0.28
LIMS3-205ENST00000487150 GPC6Q9Y625 555 aaPredicted RBP13.29□□□□□ -0.28
LIMS3-205ENST00000487150 HELZ2Q9BYK8 2649 aaKnown RBP13.29□□□□□ -0.28
LIMS3-205ENST00000487150 MRASO14807 208 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 FCMRO60667 390 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 TNFRSF21O75509 655 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 DCTN3O75935 186 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 THBS1P07996 1170 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 CHRM4P08173 479 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 TFPTP0C1Z6 253 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 PEPDP12955 493 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 CPN1P15169 458 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 IL7RP16871 459 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 BMP7P18075 431 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 GPX2P18283 190 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 POU3F2P20265 443 aaPredicted RBP13.28□□□□□ -0.28
LIMS3-205ENST00000487150 ADH6P28332 368 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 GFRA1P56159 465 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 ZNF117Q03924 483 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms