RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 XPO1O14980 1071 aaKnown RBP2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 EFNA2O43921 213 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 B3GAT3O94766 335 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 NOL4O94818 638 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 IGF1P05019 195 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 TBXA2RP21731 343 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 GDF1P27539 372 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 PSMA5P28066 241 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 IL2RGP31785 369 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 OTX2P32243 289 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 CA8P35219 290 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 NF2P35240 595 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 MDH2P40926 338 aaKnown RBP2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 BDKRB1P46663 353 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 VLDLRP98155 873 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 PJVKQ0ZLH3 352 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 ASAH1Q13510 395 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 KCNJ11Q14654 390 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 PDK4Q16654 411 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 GLYR1Q49A26 553 aaPredicted RBP2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 TMEM52BQ4KMG9 183 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 PAN3Q58A45 887 aaKnown RBP2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 RABGAP1LQ5R372 815 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 FAM120AOSQ5T036 256 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 UTF1Q5T230 341 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 SLC22A10Q63ZE4 541 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 PVRIGQ6DKI7 326 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 ACSM5Q6NUN0 579 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 UFSP1Q6NVU6 142 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 BLOC1S2Q6QNY1 142 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 CES3Q6UWW8 571 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 PAMR1Q6UXH9 720 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 VITQ6UXI7 678 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 Q6ZR54 194 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 SERPINA9Q86WD7 417 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 GPD1LQ8N335 351 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 ARL6IP6Q8N6S5 226 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 ZNF540Q8NDQ6 660 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 OR2T34Q8NGX1 318 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 CNIH3Q8TBE1 160 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 PNPT1Q8TCS8 783 aaKnown RBP2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 SPRYD4Q8WW59 207 aaPredicted RBP2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 TRUB1Q8WWH5 349 aaKnown RBP2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 OSTF1Q92882 214 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 VPS39Q96JC1 886 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 DPH7Q9BTV6 452 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 DUSP16Q9BY84 665 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 RAB33BQ9H082 229 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 MIEF1Q9NQG6 463 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 AATFQ9NY61 560 aaKnown RBP eCLIP2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 ABCD2Q9UBJ2 740 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 CHRNA9Q9UGM1 479 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 SAMD4AQ9UPU9 718 aaKnown RBP2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 OR10H1Q9Y4A9 318 aa2.65□□□□□ -1.99
SNRNP27-204ENST00000487029 FRG2CA6NGY1 282 aa2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 ZSCAN12O43309 604 aa2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 LATO43561 262 aa2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 OR1F1O43749 312 aa2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 NUDT21O43809 227 aaKnown RBP2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 BCAS1O75363 584 aaPredicted RBP2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 NEBLO76041 1014 aa2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 TM7SF2O76062 418 aa2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 DNAH10OSP0CZ25 163 aa2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 TPSB2P20231 275 aa2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 ATP6V1C1P21283 382 aa2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 NT5EP21589 574 aa2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 PAX7P23759 505 aa2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 FASP25445 335 aa2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 DEKP35659 375 aaKnown RBP2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 CHI3L1P36222 383 aaPredicted RBP2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 PLA2G16P53816 162 aa2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 CNTN2Q02246 1040 aa2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 CSTF1Q05048 431 aaKnown RBP2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 TPSAB1Q15661 275 aa2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 GSG1Q2KHT4 349 aa2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 GPR65Q8IYL9 337 aa2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 OR2T33Q8NG76 320 aa2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 TRIM44Q96DX7 344 aaPredicted RBP2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 ERP44Q9BS26 406 aa2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 PAXXQ9BUH6 204 aa2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 ALG12Q9BV10 488 aa2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 TSSK1BQ9BXA7 367 aa2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 TMEM117Q9H0C3 514 aa2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 IKZF5Q9H5V7 419 aa2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 RMND5AQ9H871 391 aa2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 MEAF6Q9HAF1 191 aa2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 SNX6Q9UNH7 406 aa2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 ATP10DQ9P241 1426 aa2.64□□□□□ -1.99
SNRNP27-204ENST00000487029 A0A1W2PNV4 684 aa2.63□□□□□ -1.99
SNRNP27-204ENST00000487029 PHOX2AO14813 284 aa2.63□□□□□ -1.99
SNRNP27-204ENST00000487029 ADCY5O95622 1261 aa2.63□□□□□ -1.99
SNRNP27-204ENST00000487029 CPN1P15169 458 aa2.63□□□□□ -1.99
SNRNP27-204ENST00000487029 RPA2P15927 270 aa2.63□□□□□ -1.99
SNRNP27-204ENST00000487029 PGCP20142 388 aa2.63□□□□□ -1.99
SNRNP27-204ENST00000487029 CALRP27797 417 aaKnown RBP2.63□□□□□ -1.99
SNRNP27-204ENST00000487029 IFNAR2P48551 515 aa2.63□□□□□ -1.99
SNRNP27-204ENST00000487029 DHPSP49366 369 aaPredicted RBP2.63□□□□□ -1.99
SNRNP27-204ENST00000487029 MEOX2P50222 304 aa2.63□□□□□ -1.99
SNRNP27-204ENST00000487029 RPL32P62910 135 aaKnown RBP2.63□□□□□ -1.99
SNRNP27-204ENST00000487029 EWSR1Q01844 656 aaKnown RBP eCLIP2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms