RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 TM7SF2O76062 418 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 NOL4O94818 638 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 CD55P08174 381 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 SLC35E2P0CK97 266 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 CA8P35219 290 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 DHPSP49366 369 aaPredicted RBP3.49□□□□□ -1.85
SMC4-218ENST00000486711 PLA2G16P53816 162 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 KRTAP12-2P59991 146 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 RPL8P62917 257 aaKnown RBP3.49□□□□□ -1.85
SMC4-218ENST00000486711 CBX1P83916 185 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 OTUD4Q01804 1114 aaKnown RBP3.49□□□□□ -1.85
SMC4-218ENST00000486711 CNTN2Q02246 1040 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 CSTF1Q05048 431 aaKnown RBP3.49□□□□□ -1.85
SMC4-218ENST00000486711 ZNF154Q13106 437 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 SELPLGQ14242 412 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 KCNJ11Q14654 390 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 QRICH1Q2TAL8 776 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 KRTAP13-3Q3SY46 172 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 CFAP157Q5JU67 520 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 ATAD3CQ5T2N8 411 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 LCE3AQ5TA76 89 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 ZNF57Q68EA5 555 aaPredicted RBP3.49□□□□□ -1.85
SMC4-218ENST00000486711 ACSM5Q6NUN0 579 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 PPP1R42Q7Z4L9 355 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 KIAA1328Q86T90 577 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 ACOT1Q86TX2 421 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 MARCH9Q86YJ5 346 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 CCDC26Q8TAB7 109 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 M1APQ8TC57 530 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 ADAMTS16Q8TE57 1224 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 RLN3Q8WXF3 142 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 ZNF607Q96SK3 696 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 OMDQ99983 421 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 POLR1EQ9GZS1 481 aaKnown RBP3.49□□□□□ -1.85
SMC4-218ENST00000486711 PNO1Q9NRX1 252 aaKnown RBP3.49□□□□□ -1.85
SMC4-218ENST00000486711 GNG12Q9UBI6 72 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 ABCD2Q9UBJ2 740 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 RNF14Q9UBS8 474 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 CHRNA9Q9UGM1 479 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 ADAMTS9Q9P2N4 1935 aa3.48□□□□□ -1.85
SMC4-218ENST00000486711 POGZQ7Z3K3 1410 aa3.48□□□□□ -1.85
SMC4-218ENST00000486711 A0A1W2PNU3 283 aaPredicted RBP3.48□□□□□ -1.85
SMC4-218ENST00000486711 GPR89AB7ZAQ6 455 aa3.48□□□□□ -1.85
SMC4-218ENST00000486711 DUSP14O95147 198 aaKnown RBP3.48□□□□□ -1.85
SMC4-218ENST00000486711 IGF1P05019 195 aa3.48□□□□□ -1.85
SMC4-218ENST00000486711 GPR89BP0CG08 455 aa3.48□□□□□ -1.85
SMC4-218ENST00000486711 TBXA2RP21731 343 aa3.48□□□□□ -1.85
SMC4-218ENST00000486711 BDKRB1P46663 353 aa3.48□□□□□ -1.85
SMC4-218ENST00000486711 RGS4P49798 205 aa3.48□□□□□ -1.85
SMC4-218ENST00000486711 ASAH1Q13510 395 aa3.48□□□□□ -1.85
SMC4-218ENST00000486711 MESDQ14696 234 aa3.48□□□□□ -1.85
SMC4-218ENST00000486711 GLYR1Q49A26 553 aaPredicted RBP3.48□□□□□ -1.85
SMC4-218ENST00000486711 LRRC23Q53EV4 343 aaPredicted RBP3.48□□□□□ -1.85
SMC4-218ENST00000486711 ZNF774Q6NX45 483 aa3.48□□□□□ -1.85
SMC4-218ENST00000486711 FAM43BQ6ZT52 329 aaPredicted RBP3.48□□□□□ -1.85
SMC4-218ENST00000486711 STXBP6Q8NFX7 210 aa3.48□□□□□ -1.85
SMC4-218ENST00000486711 OR2T33Q8NG76 320 aa3.48□□□□□ -1.85
SMC4-218ENST00000486711 TRMT10AQ8TBZ6 339 aaKnown RBP3.48□□□□□ -1.85
SMC4-218ENST00000486711 AENQ8WTP8 325 aaKnown RBP3.48□□□□□ -1.85
SMC4-218ENST00000486711 OSTF1Q92882 214 aa3.48□□□□□ -1.85
SMC4-218ENST00000486711 OR5B2Q96R09 309 aa3.48□□□□□ -1.85
SMC4-218ENST00000486711 CCT8L2Q96SF2 557 aa3.48□□□□□ -1.85
SMC4-218ENST00000486711 RIT2Q99578 217 aa3.48□□□□□ -1.85
SMC4-218ENST00000486711 TSSK1BQ9BXA7 367 aa3.48□□□□□ -1.85
SMC4-218ENST00000486711 MIEF1Q9NQG6 463 aa3.48□□□□□ -1.85
SMC4-218ENST00000486711 SAMD4AQ9UPU9 718 aaKnown RBP3.48□□□□□ -1.85
SMC4-218ENST00000486711 NAALAD2Q9Y3Q0 740 aa3.48□□□□□ -1.85
SMC4-218ENST00000486711 ALG6Q9Y672 507 aa3.48□□□□□ -1.85
SMC4-218ENST00000486711 A0A1W2PNV4 684 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 ESYT2A0FGR8 921 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 MBLAC1A4D2B0 266 aaPredicted RBP3.47□□□□□ -1.85
SMC4-218ENST00000486711 FAM220BPB1ANY3 271 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 BCL2L11O43521 198 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 NEBLO76041 1014 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 B3GAT3O94766 335 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 PGK1P00558 417 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 THY1P04216 161 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 PGCP20142 388 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 SERPINA2P20848 420 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 NT5EP21589 574 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 CALB2P22676 271 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 IGHV1-2P23083 117 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 PAX7P23759 505 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 AP3M2P53677 418 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 RPL32P62910 135 aaKnown RBP3.47□□□□□ -1.85
SMC4-218ENST00000486711 CXCL6P80162 114 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 VLDLRP98155 873 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 EWSR1Q01844 656 aaKnown RBP eCLIP3.47□□□□□ -1.85
SMC4-218ENST00000486711 RIPPLY1Q0D2K3 151 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 NDUFA9Q16795 377 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 SLC25A30Q5SVS4 291 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 METTL11BQ5VVY1 283 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 SLC22A10Q63ZE4 541 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 PVRIGQ6DKI7 326 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 FAHD2BQ6P2I3 314 aaPredicted RBP3.47□□□□□ -1.85
SMC4-218ENST00000486711 BAIAP2L2Q6UXY1 529 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 C9orf40Q8IXQ3 194 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 TBC1D21Q8IYX1 336 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 MTURNQ8N3F0 131 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 CLDN19Q8N6F1 224 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms