RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 TESCQ96BS2 214 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 INTS12Q96CB8 462 aaKnown RBP11.65□□□□□ -0.54
CHMP3-208ENST00000486404 TLCD1Q96CP7 247 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 OR7D2Q96RA2 312 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 HOXD1Q9GZZ0 328 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 MANSC1Q9H8J5 431 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 GPATCH2Q9NW75 528 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 FBXO34Q9NWN3 711 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 FOXD3Q9UJU5 478 aaPredicted RBP11.65□□□□□ -0.54
CHMP3-208ENST00000486404 L3MBTL1Q9Y468 752 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 FBN2P35556 2912 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 GOLGA8QA0A0J9YX86 632 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 A0A1W2PQD3 144 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 GOLGA8OA6NCC3 632 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 DUXAA6NLW8 204 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 SHISA8B8ZZ34 492 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 GOLGA8NF8WBI6 632 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 SDHDO14521 159 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 SNNO75324 88 aaPredicted RBP11.64□□□□□ -0.55
CHMP3-208ENST00000486404 CPSF4O95639 269 aaKnown RBP11.64□□□□□ -0.55
CHMP3-208ENST00000486404 AK1P00568 194 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 FCGR2AP12318 317 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 MATN1P21941 496 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 ME2P23368 584 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 S100A3P33764 101 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 CHI3L1P36222 383 aaPredicted RBP11.64□□□□□ -0.55
CHMP3-208ENST00000486404 KIR2DL3P43628 341 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 KHKP50053 298 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 RNF144AP50876 292 aaPredicted RBP11.64□□□□□ -0.55
CHMP3-208ENST00000486404 HPCAP84074 193 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 FAM174BQ3ZCQ3 159 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 SPANXN4Q5MJ08 99 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 ATAD3BQ5T9A4 648 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 AGBL2Q5U5Z8 902 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 OR2A2Q6IF42 318 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 PLXDC2Q6UX71 529 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 SPATA19Q7Z5L4 167 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 B4GALNT2Q8NHY0 566 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 ZBTB8AQ96BR9 441 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 SH3GL2Q99962 352 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 PINK1Q9BXM7 581 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 AIG1Q9NVV5 245 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 ARGLU1Q9NWB6 273 aaPredicted RBP11.64□□□□□ -0.55
CHMP3-208ENST00000486404 PACSIN3Q9UKS6 424 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 ZNF337Q9Y3M9 751 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 AP4B1Q9Y6B7 739 aa11.64□□□□□ -0.55
CHMP3-208ENST00000486404 NPIPA5A0A0B4J1W7 369 aa11.63□□□□□ -0.55
CHMP3-208ENST00000486404 PRSS51A0A1B0GVH4 220 aa11.63□□□□□ -0.55
CHMP3-208ENST00000486404 NPIPA7E9PJI5 369 aa11.63□□□□□ -0.55
CHMP3-208ENST00000486404 GTPBP1O00178 669 aaKnown RBP11.63□□□□□ -0.55
CHMP3-208ENST00000486404 EIF1AYO14602 144 aaKnown RBP11.63□□□□□ -0.55
CHMP3-208ENST00000486404 RCBTB2O95199 551 aa11.63□□□□□ -0.55
CHMP3-208ENST00000486404 AGR2O95994 175 aa11.63□□□□□ -0.55
CHMP3-208ENST00000486404 NPIPA8P0DM63 369 aa11.63□□□□□ -0.55
CHMP3-208ENST00000486404 EPHA3P29320 983 aa11.63□□□□□ -0.55
CHMP3-208ENST00000486404 CPOXP36551 454 aa11.63□□□□□ -0.55
CHMP3-208ENST00000486404 CCR4P51679 360 aa11.63□□□□□ -0.55
CHMP3-208ENST00000486404 ZNF117Q03924 483 aa11.63□□□□□ -0.55
CHMP3-208ENST00000486404 SNTB1Q13884 538 aaKnown RBP11.63□□□□□ -0.55
CHMP3-208ENST00000486404 CD226Q15762 336 aa11.63□□□□□ -0.55
CHMP3-208ENST00000486404 SGCBQ16585 318 aa11.63□□□□□ -0.55
CHMP3-208ENST00000486404 FBXL19-AS1Q494R0 122 aa11.63□□□□□ -0.55
CHMP3-208ENST00000486404 C6orf120Q7Z4R8 191 aa11.63□□□□□ -0.55
CHMP3-208ENST00000486404 MTERF4Q7Z6M4 381 aaKnown RBP11.63□□□□□ -0.55
CHMP3-208ENST00000486404 ADGRE4PQ86SQ3 457 aa11.63□□□□□ -0.55
CHMP3-208ENST00000486404 LUZP2Q86TE4 346 aa11.63□□□□□ -0.55
CHMP3-208ENST00000486404 CDH24Q86UP0 819 aa11.63□□□□□ -0.55
CHMP3-208ENST00000486404 KIF18BQ86Y91 864 aa11.63□□□□□ -0.55
CHMP3-208ENST00000486404 ZZZ3Q8IYH5 903 aa11.63□□□□□ -0.55
CHMP3-208ENST00000486404 CLEC4FQ8N1N0 589 aa11.63□□□□□ -0.55
CHMP3-208ENST00000486404 TRIML2Q8N7C3 387 aa11.63□□□□□ -0.55
CHMP3-208ENST00000486404 CNEP1R1Q8N9A8 125 aa11.63□□□□□ -0.55
CHMP3-208ENST00000486404 RNF145Q96MT1 663 aa11.63□□□□□ -0.55
CHMP3-208ENST00000486404 UCN2Q96RP3 112 aa11.63□□□□□ -0.55
CHMP3-208ENST00000486404 SLC35A5Q9BS91 424 aa11.63□□□□□ -0.55
CHMP3-208ENST00000486404 PIGMQ9H3S5 423 aa11.63□□□□□ -0.55
CHMP3-208ENST00000486404 WDR55Q9H6Y2 383 aaPredicted RBP11.63□□□□□ -0.55
CHMP3-208ENST00000486404 MED17Q9NVC6 651 aa11.63□□□□□ -0.55
CHMP3-208ENST00000486404 EXD2Q9NVH0 621 aa11.63□□□□□ -0.55
CHMP3-208ENST00000486404 METRNQ9UJH8 293 aa11.63□□□□□ -0.55
CHMP3-208ENST00000486404 A0A1W2PNV4 684 aa11.62□□□□□ -0.55
CHMP3-208ENST00000486404 SYT5O00445 386 aa11.62□□□□□ -0.55
CHMP3-208ENST00000486404 TNFRSF21O75509 655 aa11.62□□□□□ -0.55
CHMP3-208ENST00000486404 SMNDC1O75940 238 aaKnown RBP eCLIP11.62□□□□□ -0.55
CHMP3-208ENST00000486404 ALDOCP09972 364 aaKnown RBP11.62□□□□□ -0.55
CHMP3-208ENST00000486404 UBL4AP11441 157 aa11.62□□□□□ -0.55
CHMP3-208ENST00000486404 IDO1P14902 403 aa11.62□□□□□ -0.55
CHMP3-208ENST00000486404 CAPN3P20807 821 aa11.62□□□□□ -0.55
CHMP3-208ENST00000486404 UQCRC2P22695 453 aa11.62□□□□□ -0.55
CHMP3-208ENST00000486404 EIF1AXP47813 144 aaKnown RBP11.62□□□□□ -0.55
CHMP3-208ENST00000486404 ANXA11P50995 505 aaKnown RBP11.62□□□□□ -0.55
CHMP3-208ENST00000486404 SUMO3P55854 103 aaPredicted RBP11.62□□□□□ -0.55
CHMP3-208ENST00000486404 DLX5P56178 289 aa11.62□□□□□ -0.55
CHMP3-208ENST00000486404 EEF1A1P68104 462 aaKnown RBP11.62□□□□□ -0.55
CHMP3-208ENST00000486404 SIRPAP78324 504 aa11.62□□□□□ -0.55
CHMP3-208ENST00000486404 OCRLQ01968 901 aa11.62□□□□□ -0.55
CHMP3-208ENST00000486404 FOXF2Q12947 444 aa11.62□□□□□ -0.55
CHMP3-208ENST00000486404 PON3Q15166 354 aa11.62□□□□□ -0.55
CHMP3-208ENST00000486404 PLPPR5Q32ZL2 321 aa11.62□□□□□ -0.55
CHMP3-208ENST00000486404 EEF1A1P5Q5VTE0 462 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms