RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 ASAH1Q13510 395 aa8.65□□□□□ -1.02
USP16-206ENST00000485067 ELAVL3Q14576 367 aaKnown RBP8.65□□□□□ -1.02
USP16-206ENST00000485067 DUSP6Q16828 381 aa8.65□□□□□ -1.02
USP16-206ENST00000485067 PNLIPRP3Q17RR3 467 aa8.65□□□□□ -1.02
USP16-206ENST00000485067 GAB4Q2WGN9 574 aa8.65□□□□□ -1.02
USP16-206ENST00000485067 BTBD16Q32M84 506 aa8.65□□□□□ -1.02
USP16-206ENST00000485067 TMEM52BQ4KMG9 183 aa8.65□□□□□ -1.02
USP16-206ENST00000485067 ZNF544Q6NX49 715 aa8.65□□□□□ -1.02
USP16-206ENST00000485067 TRIM40Q6P9F5 258 aa8.65□□□□□ -1.02
USP16-206ENST00000485067 CRTC3Q6UUV7 619 aa8.65□□□□□ -1.02
USP16-206ENST00000485067 SMIM15Q7Z3B0 74 aa8.65□□□□□ -1.02
USP16-206ENST00000485067 B3GNT8Q7Z7M8 397 aa8.65□□□□□ -1.02
USP16-206ENST00000485067 ADGRG3Q86Y34 549 aa8.65□□□□□ -1.02
USP16-206ENST00000485067 GPALPP1Q8IXQ4 340 aa8.65□□□□□ -1.02
USP16-206ENST00000485067 LRRC56Q8IYG6 542 aaPredicted RBP8.65□□□□□ -1.02
USP16-206ENST00000485067 ZNF561Q8N587 486 aa8.65□□□□□ -1.02
USP16-206ENST00000485067 MEIOBQ8N635 442 aa8.65□□□□□ -1.02
USP16-206ENST00000485067 OR4M2Q8NGB6 313 aa8.65□□□□□ -1.02
USP16-206ENST00000485067 OR2L8Q8NGY9 312 aa8.65□□□□□ -1.02
USP16-206ENST00000485067 CNIH3Q8TBE1 160 aa8.65□□□□□ -1.02
USP16-206ENST00000485067 RORBQ92753 470 aa8.65□□□□□ -1.02
USP16-206ENST00000485067 FKBP10Q96AY3 582 aa8.65□□□□□ -1.02
USP16-206ENST00000485067 PPCDCQ96CD2 204 aa8.65□□□□□ -1.02
USP16-206ENST00000485067 KLHL15Q96M94 604 aa8.65□□□□□ -1.02
USP16-206ENST00000485067 ZNF385AQ96PM9 386 aaKnown RBP8.65□□□□□ -1.02
USP16-206ENST00000485067 FUNDC2Q9BWH2 189 aa8.65□□□□□ -1.02
USP16-206ENST00000485067 GABARAPL3Q9BY60 117 aa8.65□□□□□ -1.02
USP16-206ENST00000485067 CCDC90BQ9GZT6 254 aa8.65□□□□□ -1.02
USP16-206ENST00000485067 TMEM38AQ9H6F2 299 aa8.65□□□□□ -1.02
USP16-206ENST00000485067 TREM2Q9NZC2 230 aa8.65□□□□□ -1.02
USP16-206ENST00000485067 TP53TG5Q9Y2B4 290 aa8.65□□□□□ -1.02
USP16-206ENST00000485067 CLDN16Q9Y5I7 305 aa8.65□□□□□ -1.02
USP16-206ENST00000485067 ALG5Q9Y673 324 aa8.65□□□□□ -1.02
USP16-206ENST00000485067 TP53BP1Q12888 1972 aaPredicted RBP8.65□□□□□ -1.02
USP16-206ENST00000485067 C9orf170A2RU37 121 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 TMEM238C9JI98 176 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 ARHGEF9O43307 516 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 NFATC1O95644 943 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 IFNA2P01563 188 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 LIPFP07098 398 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 ZNF182P17025 639 aaPredicted RBP8.65□□□□□ -1.03
USP16-206ENST00000485067 NT5EP21589 574 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 ACADLP28330 430 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 PXNP49023 591 aaPredicted RBP8.65□□□□□ -1.03
USP16-206ENST00000485067 ACTBP60709 375 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 ACTA2P62736 377 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 ACTG1P63261 375 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 ACTG2P63267 376 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 ACTC1P68032 377 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 ACTA1P68133 377 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 EMX1Q04741 257 aaPredicted RBP8.65□□□□□ -1.03
USP16-206ENST00000485067 NPRL3Q12980 569 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 IKZF1Q13422 519 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 GAB1Q13480 694 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 MAD2L1BPQ15013 274 aaPredicted RBP8.65□□□□□ -1.03
USP16-206ENST00000485067 SF1Q15637 639 aaKnown RBP8.65□□□□□ -1.03
USP16-206ENST00000485067 TOMM34Q15785 309 aaPredicted RBP8.65□□□□□ -1.03
USP16-206ENST00000485067 FAM78AQ5JUQ0 283 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 CATSPEREQ5SY80 951 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 GCNT6Q5T4J0 391 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 C9orf64Q5T6V5 341 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 FAM71E1Q6IPT2 247 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 ADNP2Q6IQ32 1131 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 SLC25A25Q6KCM7 469 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 RPL13AP3Q6NVV1 102 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 METAP1DQ6UB28 335 aaPredicted RBP8.65□□□□□ -1.03
USP16-206ENST00000485067 LCTLQ6UWM7 567 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 TRILQ7L0X0 811 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 CACUL1Q86Y37 369 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 FAM185AQ8N0U4 392 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 POGLUT1Q8NBL1 392 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 C19orf18Q8NEA5 215 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 C16orf78Q8WTQ4 265 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 FAR1Q8WVX9 515 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 TEFMQ96QE5 360 aaKnown RBP8.65□□□□□ -1.03
USP16-206ENST00000485067 DGCR6LQ9BY27 220 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 MCOLN1Q9GZU1 580 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 NECTIN3Q9NQS3 549 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 PRDM7Q9NQW5 492 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 DYRK4Q9NR20 520 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 PAK1IP1Q9NWT1 392 aaPredicted RBP8.65□□□□□ -1.03
USP16-206ENST00000485067 AHSPQ9NZD4 102 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 EXO1Q9UQ84 846 aaKnown RBP8.65□□□□□ -1.03
USP16-206ENST00000485067 MMACHCQ9Y4U1 282 aa8.65□□□□□ -1.03
USP16-206ENST00000485067 RGS10O43665 173 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 GMFGO60234 142 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 SLC22A5O76082 557 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 RPN2P04844 631 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 SERPINA5P05154 406 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 MAGP20916 626 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 CD247P20963 164 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 TUBG1P23258 451 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 GIFP27352 417 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 HTR1BP28222 390 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 DDOSTP39656 456 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 FEN1P39748 380 aaKnown RBP8.64□□□□□ -1.03
USP16-206ENST00000485067 IL12RB1P42701 662 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 GP2P55259 537 aaKnown RBP8.64□□□□□ -1.03
USP16-206ENST00000485067 SELENOVP59797 346 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 HBA1P69905 142 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms