RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 ZNF678Q5SXM1 525 aa11.41□□□□□ -0.58
UBR4-213ENST00000483922 STK32CQ86UX6 486 aa11.41□□□□□ -0.58
UBR4-213ENST00000483922 SAMD14Q8IZD0 417 aaPredicted RBP11.41□□□□□ -0.58
UBR4-213ENST00000483922 ELOA3Q8NG57 546 aa11.41□□□□□ -0.58
UBR4-213ENST00000483922 GIMAP5Q96F15 307 aa11.41□□□□□ -0.58
UBR4-213ENST00000483922 KCNK17Q96T54 332 aa11.41□□□□□ -0.58
UBR4-213ENST00000483922 MRPL57Q9BQC6 102 aaKnown RBP11.41□□□□□ -0.58
UBR4-213ENST00000483922 RHNO1Q9BSD3 238 aa11.41□□□□□ -0.58
UBR4-213ENST00000483922 ACSS3Q9H6R3 686 aa11.41□□□□□ -0.58
UBR4-213ENST00000483922 LRTM1Q9HBL6 345 aa11.41□□□□□ -0.58
UBR4-213ENST00000483922 Q9N2J8 555 aa11.41□□□□□ -0.58
UBR4-213ENST00000483922 TMEM160Q9NX00 188 aa11.41□□□□□ -0.58
UBR4-213ENST00000483922 PAQR5Q9NXK6 330 aaPredicted RBP11.41□□□□□ -0.58
UBR4-213ENST00000483922 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.41□□□□□ -0.583e-7■■■■□ 21.9
UBR4-213ENST00000483922 MEGF8Q7Z7M0 2845 aa11.41□□□□□ -0.58
UBR4-213ENST00000483922 IGHV3-15A0A0B4J1V0 119 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 GOLGA8QA0A0J9YX86 632 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 ESYT3A0FGR9 886 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 SLC35F4A4IF30 521 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 GOLGA8OA6NCC3 632 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 C9JVG2 144 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 GOLGA8NF8WBI6 632 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 GOLGA8RI6L899 631 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 UBFD1O14562 309 aaKnown RBP11.4□□□□□ -0.58
UBR4-213ENST00000483922 NDUFB5O43674 189 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 DLX3O60479 287 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 ULK1O75385 1050 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 IGHV4-31P0DP07 118 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 ENPP1P22413 925 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 SFTPDP35247 375 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 CLK3P49761 638 aaKnown RBP11.4□□□□□ -0.58
UBR4-213ENST00000483922 FOXA1P55317 472 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 ITGADQ13349 1161 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 IL17RELQ6ZVW7 336 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 ZNF551Q7Z340 670 aaPredicted RBP11.4□□□□□ -0.58
UBR4-213ENST00000483922 TRABD2AQ86V40 505 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 ZNF525Q8N782 197 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 BANPQ8N9N5 519 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 METTL6Q8TCB7 284 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 ACTRT2Q8TDY3 377 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 ZNF75CPQ92670 426 aaPredicted RBP11.4□□□□□ -0.58
UBR4-213ENST00000483922 KISS1RQ969F8 398 aaPredicted RBP11.4□□□□□ -0.58
UBR4-213ENST00000483922 ZBTB8AQ96BR9 441 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 ZNF775Q96BV0 537 aaPredicted RBP11.4□□□□□ -0.58
UBR4-213ENST00000483922 SH3YL1Q96HL8 342 aaPredicted RBP11.4□□□□□ -0.58
UBR4-213ENST00000483922 EGLN2Q96KS0 407 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 KLHL15Q96M94 604 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 HS6ST2Q96MM7 605 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 TMEM237Q96Q45 408 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 ZNF382Q96SR6 550 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 BEX2Q9BXY8 128 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 FUT8Q9BYC5 575 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 MRPL46Q9H2W6 279 aaKnown RBP11.4□□□□□ -0.58
UBR4-213ENST00000483922 CXorf36Q9H7Y0 433 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 COQ10BQ9H8M1 238 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 GIMAP4Q9NUV9 329 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 TMEM216Q9P0N5 145 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 SENP1Q9P0U3 644 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 KLHL13Q9P2N7 655 aa11.4□□□□□ -0.58
UBR4-213ENST00000483922 UQCRHLA0A096LP55 91 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 SERTM1A2A2V5 107 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 WIPF1O43516 503 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 LYZL6O75951 148 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 SUPT7LO94864 414 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 KRT6AP02538 564 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 KRT6BP04259 564 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 YES1P07947 543 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 NGFRP08138 427 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 ACP2P11117 423 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 IL32P24001 234 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 THBS2P35442 1172 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 KRT6CP48668 564 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 PRIM2P49643 509 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 RNF144AP50876 292 aaPredicted RBP11.39□□□□□ -0.59
UBR4-213ENST00000483922 SLC7A5Q01650 507 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 CAV1Q03135 178 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 SPOCK1Q08629 439 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 ACSM2AQ08AH3 577 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 SLC29A2Q14542 456 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 RASA2Q15283 850 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 TOMM34Q15785 309 aaPredicted RBP11.39□□□□□ -0.59
UBR4-213ENST00000483922 GLE1Q53GS7 698 aaKnown RBP11.39□□□□□ -0.59
UBR4-213ENST00000483922 SPIN4Q56A73 249 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 EXOSC6Q5RKV6 272 aaKnown RBP11.39□□□□□ -0.59
UBR4-213ENST00000483922 ACSM2BQ68CK6 577 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 B3GLCTQ6Y288 498 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 BHLHA15Q7RTS1 189 aaPredicted RBP11.39□□□□□ -0.59
UBR4-213ENST00000483922 SLC16A11Q8NCK7 471 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 GPR151Q8TDV0 419 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 C16orf58Q96GQ5 468 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 CACNG6Q9BXT2 260 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 MANSC1Q9H8J5 431 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 BARX1Q9HBU1 254 aaPredicted RBP11.39□□□□□ -0.59
UBR4-213ENST00000483922 FANCFQ9NPI8 374 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 EQTNQ9NQ60 294 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 DDX18Q9NVP1 670 aaKnown RBP11.39□□□□□ -0.59
UBR4-213ENST00000483922 GRID1Q9ULK0 1009 aa11.39□□□□□ -0.59
UBR4-213ENST00000483922 ABCD4O14678 606 aa11.38□□□□□ -0.59
UBR4-213ENST00000483922 LY6HO94772 140 aa11.38□□□□□ -0.59
UBR4-213ENST00000483922 PRKD3O94806 890 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms