RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 SLC41A3Q96GZ6 507 aa8.18□□□□□ -1.1
CDC42SE1-204ENST00000483763 DOK1Q99704 481 aa8.18□□□□□ -1.1
CDC42SE1-204ENST00000483763 TUBA1CQ9BQE3 449 aa8.18□□□□□ -1.1
CDC42SE1-204ENST00000483763 PRSS27Q9BQR3 290 aa8.18□□□□□ -1.1
CDC42SE1-204ENST00000483763 SLC7A5P2Q9GIP4 190 aa8.18□□□□□ -1.1
CDC42SE1-204ENST00000483763 ZNF768Q9H5H4 540 aaKnown RBP8.18□□□□□ -1.1
CDC42SE1-204ENST00000483763 VCX3AQ9NNX9 186 aa8.18□□□□□ -1.1
CDC42SE1-204ENST00000483763 ACOT13Q9NPJ3 140 aa8.18□□□□□ -1.1
CDC42SE1-204ENST00000483763 SLC22A11Q9NSA0 550 aa8.18□□□□□ -1.1
CDC42SE1-204ENST00000483763 IMPAD1Q9NX62 359 aa8.18□□□□□ -1.1
CDC42SE1-204ENST00000483763 KLHL28Q9NXS3 571 aa8.18□□□□□ -1.1
CDC42SE1-204ENST00000483763 SCN3BQ9NY72 215 aa8.18□□□□□ -1.1
CDC42SE1-204ENST00000483763 PTTG2Q9NZH5 202 aa8.18□□□□□ -1.1
CDC42SE1-204ENST00000483763 GMEB2Q9UKD1 530 aa8.18□□□□□ -1.1
CDC42SE1-204ENST00000483763 CNOT1A5YKK6 2376 aaKnown RBP8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 IGKV3D-11A0A0A0MRZ8 115 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 CLCA1A8K7I4 914 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 AP3D1O14617 1153 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 LCKP06239 509 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 FUT1P19526 365 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 ITIH1P19827 911 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 GIPRP48546 466 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 OCA2Q04671 838 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 TRAM2Q15035 370 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 SLX4IPQ5VYV7 408 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 NIPAL1Q6NVV3 410 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 TMEM71Q6P5X7 295 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 CD300LDQ6UXZ3 194 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 CCDC81Q6ZN84 652 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 SHISA6Q6ZSJ9 500 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 PTCHD4Q6ZW05 846 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 PLEKHM3Q6ZWE6 761 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 NRMQ8IXM6 262 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 GPR135Q8IZ08 494 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 CARFQ8N187 725 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 ZNF614Q8N883 585 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 OR8D4Q8NGM9 314 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 SLC38A4Q969I6 547 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 COPS4Q9BT78 406 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 DCUN1D5Q9BTE7 237 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 DUSP23Q9BVJ7 150 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 FUNDC2Q9BWH2 189 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 GTPBP2Q9BX10 602 aaKnown RBP8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 PNO1Q9NRX1 252 aaKnown RBP8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 RXFP3Q9NSD7 469 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 FKBP14Q9NWM8 211 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 TAS2R16Q9NYV7 291 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 CTSFQ9UBX1 484 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 IL20RAQ9UHF4 553 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 SNX5Q9Y5X3 404 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 A0A1W2PPW3 197 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 RGS10O43665 173 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 PRKYO43930 277 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 ENTPD6O75354 484 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 LYPD3O95274 346 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 RPLP0P05388 317 aaKnown RBP8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 STSP08842 583 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 MSL3P1P0C860 447 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 ENPP1P22413 925 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 GPR4P46093 362 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 SLC37A1P57057 533 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 CDC42P60953 191 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 RHAGQ02094 409 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 SPEM2Q0P670 501 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 DSG2Q14126 1118 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 NDUFAF6Q330K2 333 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 C12orf73Q69YU5 71 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 DESI1Q6ICB0 168 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 TCEAL6Q6IPX3 200 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 SLC16A12Q6ZSM3 486 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 PRSS48Q7RTY5 328 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 SUMF1Q8NBK3 374 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 B3GNT7Q8NFL0 401 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 ADAMTS18Q8TE60 1221 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 TCEAL3Q969E4 200 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 MVB12AQ96EY5 273 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 DPYSL5Q9BPU6 564 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 NDC1Q9BTX1 674 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 CENPOQ9BU64 300 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 C20orf141Q9NUB4 165 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 PLCXD1Q9NUJ7 323 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 FLRT3Q9NZU0 649 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 SERTAD3Q9UJW9 196 aa8.17□□□□□ -1.1
CDC42SE1-204ENST00000483763 IGHV5-10-1A0A0J9YXX1 117 aa8.16□□□□□ -1.1
CDC42SE1-204ENST00000483763 BLACEA4D250 179 aa8.16□□□□□ -1.1
CDC42SE1-204ENST00000483763 ZNF99A8MXY4 864 aaPredicted RBP8.16□□□□□ -1.1
CDC42SE1-204ENST00000483763 NPIPB9F8W1W9 429 aa8.16□□□□□ -1.1
CDC42SE1-204ENST00000483763 KLF4O43474 513 aa8.16□□□□□ -1.1
CDC42SE1-204ENST00000483763 PRAMEF2O60811 474 aa8.16□□□□□ -1.1
CDC42SE1-204ENST00000483763 AK1P00568 194 aa8.16□□□□□ -1.1
CDC42SE1-204ENST00000483763 DRD5P21918 477 aa8.16□□□□□ -1.1
CDC42SE1-204ENST00000483763 TTKP33981 857 aa8.16□□□□□ -1.1
CDC42SE1-204ENST00000483763 ACAA2P42765 397 aaKnown RBP8.16□□□□□ -1.1
CDC42SE1-204ENST00000483763 SH3BGRP55822 239 aaPredicted RBP8.16□□□□□ -1.1
CDC42SE1-204ENST00000483763 EFNB1P98172 346 aa8.16□□□□□ -1.1
CDC42SE1-204ENST00000483763 DBPQ10586 325 aaPredicted RBP8.16□□□□□ -1.1
CDC42SE1-204ENST00000483763 ST3GAL4Q11206 333 aa8.16□□□□□ -1.1
CDC42SE1-204ENST00000483763 COX10Q12887 443 aa8.16□□□□□ -1.1
CDC42SE1-204ENST00000483763 GINS1Q14691 196 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms