RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 MED17Q9NVC6 651 aa16.66■□□□□ 0.26
CLK1-211ENST00000481641 EIF3LQ9Y262 564 aaKnown RBP16.66■□□□□ 0.26
CLK1-211ENST00000481641 KCNE3Q9Y6H6 103 aa16.66■□□□□ 0.26
CLK1-211ENST00000481641 CTIFO43310 598 aaKnown RBP16.65■□□□□ 0.26
CLK1-211ENST00000481641 OIP5O43482 229 aa16.65■□□□□ 0.26
CLK1-211ENST00000481641 C6orf47O95873 294 aa16.65■□□□□ 0.26
CLK1-211ENST00000481641 HPGDP15428 266 aa16.65■□□□□ 0.26
CLK1-211ENST00000481641 IL11P20809 199 aa16.65■□□□□ 0.26
CLK1-211ENST00000481641 PSMA4P25789 261 aaKnown RBP16.65■□□□□ 0.26
CLK1-211ENST00000481641 MAPK1P28482 360 aa16.65■□□□□ 0.26
CLK1-211ENST00000481641 UGT2B10P36537 528 aa16.65■□□□□ 0.26
CLK1-211ENST00000481641 MLC1Q15049 377 aa16.65■□□□□ 0.26
CLK1-211ENST00000481641 EXOC3L2Q2M3D2 409 aa16.65■□□□□ 0.26
CLK1-211ENST00000481641 CTU2Q2VPK5 515 aaKnown RBP16.65■□□□□ 0.26
CLK1-211ENST00000481641 PLPPR5Q32ZL2 321 aa16.65■□□□□ 0.26
CLK1-211ENST00000481641 IL23RQ5VWK5 629 aa16.65■□□□□ 0.26
CLK1-211ENST00000481641 ZCCHC12Q6PEW1 402 aa16.65■□□□□ 0.26
CLK1-211ENST00000481641 GTPBP8Q8N3Z3 284 aaPredicted RBP16.65■□□□□ 0.26
CLK1-211ENST00000481641 OR10D3Q8NH80 312 aa16.65■□□□□ 0.26
CLK1-211ENST00000481641 POC1BQ8TC44 478 aa16.65■□□□□ 0.26
CLK1-211ENST00000481641 AENQ8WTP8 325 aaKnown RBP16.65■□□□□ 0.26
CLK1-211ENST00000481641 ZC3HAV1LQ96H79 300 aaKnown RBP16.65■□□□□ 0.26
CLK1-211ENST00000481641 ADGRG7Q96K78 797 aa16.65■□□□□ 0.26
CLK1-211ENST00000481641 MED18Q9BUE0 208 aa16.65■□□□□ 0.26
CLK1-211ENST00000481641 BTBD2Q9BX70 525 aa16.65■□□□□ 0.26
CLK1-211ENST00000481641 PRRG4Q9BZD6 226 aa16.65■□□□□ 0.26
CLK1-211ENST00000481641 UBQLN4Q9NRR5 601 aa16.65■□□□□ 0.26
CLK1-211ENST00000481641 PROCRQ9UNN8 238 aa16.65■□□□□ 0.26
CLK1-211ENST00000481641 A0A087WZY1 265 aa16.64■□□□□ 0.25
CLK1-211ENST00000481641 DEFB108AA8MXU0 73 aa16.64■□□□□ 0.25
CLK1-211ENST00000481641 SCDO00767 359 aa16.64■□□□□ 0.25
CLK1-211ENST00000481641 TNFSF11O14788 317 aa16.64■□□□□ 0.25
CLK1-211ENST00000481641 CXCL13O43927 109 aa16.64■□□□□ 0.25
CLK1-211ENST00000481641 BPGMP07738 259 aa16.64■□□□□ 0.25
CLK1-211ENST00000481641 CD8BP10966 210 aa16.64■□□□□ 0.25
CLK1-211ENST00000481641 ZNF17P17021 662 aa16.64■□□□□ 0.25
CLK1-211ENST00000481641 SERPINB4P48594 390 aa16.64■□□□□ 0.25
CLK1-211ENST00000481641 CCT3P49368 545 aaKnown RBP16.64■□□□□ 0.25
CLK1-211ENST00000481641 ZNF41P51814 821 aaPredicted RBP16.64■□□□□ 0.25
CLK1-211ENST00000481641 TP53BP2Q13625 1128 aa16.64■□□□□ 0.25
CLK1-211ENST00000481641 ATP6AP1LQ52LC2 224 aa16.64■□□□□ 0.25
CLK1-211ENST00000481641 CPTPQ5TA50 214 aa16.64■□□□□ 0.25
CLK1-211ENST00000481641 FAM214BQ7L5A3 538 aa16.64■□□□□ 0.25
CLK1-211ENST00000481641 WDR75Q8IWA0 830 aaKnown RBP16.64■□□□□ 0.25
CLK1-211ENST00000481641 FNDC5Q8NAU1 212 aa16.64■□□□□ 0.25
CLK1-211ENST00000481641 B4GALNT2Q8NHY0 566 aa16.64■□□□□ 0.25
CLK1-211ENST00000481641 PIK3IP1Q96FE7 263 aa16.64■□□□□ 0.25
CLK1-211ENST00000481641 SLC39A3Q9BRY0 314 aa16.64■□□□□ 0.25
CLK1-211ENST00000481641 ROPN1BQ9BZX4 212 aaPredicted RBP16.64■□□□□ 0.25
CLK1-211ENST00000481641 KLHL4Q9C0H6 718 aa16.64■□□□□ 0.25
CLK1-211ENST00000481641 ROPN1Q9HAT0 212 aaPredicted RBP16.64■□□□□ 0.25
CLK1-211ENST00000481641 DLL4Q9NR61 685 aa16.64■□□□□ 0.25
CLK1-211ENST00000481641 ELOVL5Q9NYP7 299 aa16.64■□□□□ 0.25
CLK1-211ENST00000481641 A0A0J9YW62 118 aa16.63■□□□□ 0.25
CLK1-211ENST00000481641 C16orf97H3BN30 126 aa16.63■□□□□ 0.25
CLK1-211ENST00000481641 LYPLA1O75608 230 aaPredicted RBP16.63■□□□□ 0.25
CLK1-211ENST00000481641 SHC1P29353 583 aa16.63■□□□□ 0.25
CLK1-211ENST00000481641 ZNF117Q03924 483 aa16.63■□□□□ 0.25
CLK1-211ENST00000481641 SPDYE7PQ495Y7 208 aa16.63■□□□□ 0.25
CLK1-211ENST00000481641 CDC73Q6P1J9 531 aa16.63■□□□□ 0.25
CLK1-211ENST00000481641 OR5AK3PQ8NH89 298 aa16.63■□□□□ 0.25
CLK1-211ENST00000481641 PHOSPHO1Q8TCT1 267 aa16.63■□□□□ 0.25
CLK1-211ENST00000481641 ACTRT2Q8TDY3 377 aa16.63■□□□□ 0.25
CLK1-211ENST00000481641 OR5P2Q8WZ92 322 aa16.63■□□□□ 0.25
CLK1-211ENST00000481641 ZBTB8AQ96BR9 441 aa16.63■□□□□ 0.25
CLK1-211ENST00000481641 TUBGCP3Q96CW5 907 aa16.63■□□□□ 0.25
CLK1-211ENST00000481641 COQ8BQ96D53 544 aa16.63■□□□□ 0.25
CLK1-211ENST00000481641 PKNOX2Q96KN3 472 aa16.63■□□□□ 0.25
CLK1-211ENST00000481641 STACQ99469 402 aa16.63■□□□□ 0.25
CLK1-211ENST00000481641 PIGUQ9H490 435 aa16.63■□□□□ 0.25
CLK1-211ENST00000481641 ZNF395Q9H8N7 513 aaPredicted RBP16.63■□□□□ 0.25
CLK1-211ENST00000481641 DUSP22Q9NRW4 184 aa16.63■□□□□ 0.25
CLK1-211ENST00000481641 GPATCH2Q9NW75 528 aa16.63■□□□□ 0.25
CLK1-211ENST00000481641 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.63■□□□□ 0.25
CLK1-211ENST00000481641 V9GYY5 206 aaPredicted RBP16.63■□□□□ 0.25
CLK1-211ENST00000481641 A0A1W2PQD3 144 aa16.62■□□□□ 0.25
CLK1-211ENST00000481641 WDR91A4D1P6 747 aa16.62■□□□□ 0.25
CLK1-211ENST00000481641 ITM2AO43736 263 aa16.62■□□□□ 0.25
CLK1-211ENST00000481641 TYROBPO43914 113 aa16.62■□□□□ 0.25
CLK1-211ENST00000481641 FCGR2AP12318 317 aa16.62■□□□□ 0.25
CLK1-211ENST00000481641 DDX5P17844 614 aaKnown RBP16.62■□□□□ 0.25
CLK1-211ENST00000481641 CRYGSP22914 178 aa16.62■□□□□ 0.25
CLK1-211ENST00000481641 LCN1P31025 176 aa16.62■□□□□ 0.25
CLK1-211ENST00000481641 RPL3P39023 403 aaKnown RBP16.62■□□□□ 0.25
CLK1-211ENST00000481641 ETV4P43268 484 aa16.62■□□□□ 0.25
CLK1-211ENST00000481641 PCYT1AP49585 367 aa16.62■□□□□ 0.25
CLK1-211ENST00000481641 RAC1P63000 192 aa16.62■□□□□ 0.25
CLK1-211ENST00000481641 OCRLQ01968 901 aa16.62■□□□□ 0.25
CLK1-211ENST00000481641 NDUFAF6Q330K2 333 aa16.62■□□□□ 0.25
CLK1-211ENST00000481641 CBLN3Q6UW01 205 aa16.62■□□□□ 0.25
CLK1-211ENST00000481641 KRTAP1-3Q8IUG1 177 aa16.62■□□□□ 0.25
CLK1-211ENST00000481641 OR2V1Q8NHB1 315 aa16.62■□□□□ 0.25
CLK1-211ENST00000481641 PSMA8Q8TAA3 256 aa16.62■□□□□ 0.25
CLK1-211ENST00000481641 ADAMTS15Q8TE58 950 aa16.62■□□□□ 0.25
CLK1-211ENST00000481641 ZBTB9Q96C00 473 aa16.62■□□□□ 0.25
CLK1-211ENST00000481641 PPP1R36Q96LQ0 422 aa16.62■□□□□ 0.25
CLK1-211ENST00000481641 HS3ST6Q96QI5 342 aa16.62■□□□□ 0.25
CLK1-211ENST00000481641 ACTRT3Q9BYD9 372 aa16.62■□□□□ 0.25
CLK1-211ENST00000481641 NEUROD4Q9HD90 331 aa16.62■□□□□ 0.25
CLK1-211ENST00000481641 ZNF226Q9NYT6 803 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms