RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 DUSP19Q8WTR2 217 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 CANT1Q8WVQ1 401 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 TMCO6Q96DC7 493 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 RNF145Q96MT1 663 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 UTP23Q9BRU9 249 aaKnown RBP5.89□□□□□ -1.47
HERC4-210ENST00000480158 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.89□□□□□ -1.47
HERC4-210ENST00000480158 GORASP2Q9H8Y8 452 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 BCL2L10Q9HD36 194 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 SLC13A4Q9UKG4 626 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 ZNF443Q9Y2A4 671 aaPredicted RBP5.89□□□□□ -1.47
HERC4-210ENST00000480158 CARD8Q9Y2G2 431 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 PCDHGB7Q9Y5F8 929 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 ITPR1Q14643 2758 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 PIEZO2Q9H5I5 2752 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 SPENQ96T58 3664 aaKnown RBP5.89□□□□□ -1.47
HERC4-210ENST00000480158 DSPPQ9NZW4 1301 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 H0Y3Z8 333 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 GTPBP1O00178 669 aaKnown RBP5.88□□□□□ -1.47
HERC4-210ENST00000480158 EIF1AYO14602 144 aaKnown RBP5.88□□□□□ -1.47
HERC4-210ENST00000480158 TPST2O60704 377 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 PDE9AO76083 593 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 SOX30O94993 753 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 EPPINO95925 133 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 CSTAP01040 98 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 DBIP07108 87 aaKnown RBP5.88□□□□□ -1.47
HERC4-210ENST00000480158 FESP07332 822 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 PRG2P13727 222 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 ETS2P15036 469 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 CD97P48960 835 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 ACTR3P61158 418 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 SELENOWP63302 87 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 KCNJ10P78508 379 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 TUBA3CQ13748 450 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 LARS2Q15031 903 aaKnown RBP5.88□□□□□ -1.47
HERC4-210ENST00000480158 OR1C1Q15619 314 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 FXNQ16595 210 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 NTRK2Q16620 822 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 COLEC12Q5KU26 742 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 LCN8Q6JVE9 175 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 TUBA3EQ6PEY2 450 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 BORAQ6PGQ7 559 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 CBLN3Q6UW01 205 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 CBLL1Q75N03 491 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 LACC1Q8IV20 430 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 SLC30A8Q8IWU4 369 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 METTL25Q8N6Q8 603 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 ZNF527Q8NB42 609 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 POGLUT1Q8NBL1 392 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 CNOT9Q92600 299 aaKnown RBP5.88□□□□□ -1.47
HERC4-210ENST00000480158 PROX1Q92786 737 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 KLHDC3Q9BQ90 382 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 SPATA5L1Q9BVQ7 753 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 ABI3Q9P2A4 366 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 RPS6KA6Q9UK32 745 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 SAMD4AQ9UPU9 718 aaKnown RBP5.88□□□□□ -1.47
HERC4-210ENST00000480158 NTNG1Q9Y2I2 539 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 RRP15Q9Y3B9 282 aaKnown RBP5.88□□□□□ -1.47
HERC4-210ENST00000480158 CHST2Q9Y4C5 530 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 DTNAQ9Y4J8 743 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 CHCHD2Q9Y6H1 151 aaPredicted RBP5.88□□□□□ -1.47
HERC4-210ENST00000480158 A0A087WV48 116 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 A0A0G2JMM0 328 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 A0A1W2PPB8 328 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 A0A1W2PRS3 328 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 TCRBV5S2A0A599 114 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 DHRS12A0PJE2 317 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 SERINC4A6NH21 518 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 KIR3DP1A8MWS1 328 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 NPIPB9F8W1W9 429 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 TP53I11O14683 189 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 GNB5O14775 395 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 OIP5O43482 229 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 HCRTR2O43614 444 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 LILRA1O75019 489 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 SLC25A12O75746 678 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 ANGPTL1O95841 491 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 NUDT14O95848 222 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 IFNA14P01570 189 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 FAM87AP0C7U9 286 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 NID1P14543 1247 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 CD247P20963 164 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 PTNP21246 168 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 TBXA2RP21731 343 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 CASRP41180 1078 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 CASP3P42574 277 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 KCNJ5P48544 419 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 DNASE1L1P49184 302 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 HLCSP50747 726 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 ELF3P78545 371 aaPredicted RBP5.88□□□□□ -1.47
HERC4-210ENST00000480158 TBR1Q16650 682 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 KLHL26Q53HC5 615 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 SLC22A10Q63ZE4 541 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 DEF8Q6ZN54 512 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 CCDC80Q76M96 950 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 EIF3MQ7L2H7 374 aaKnown RBP5.88□□□□□ -1.47
HERC4-210ENST00000480158 NUP54Q7Z3B4 507 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 ZNF227Q86WZ6 799 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 SLC15A4Q8N697 577 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 OR4D11Q8NGI4 311 aa5.88□□□□□ -1.47
HERC4-210ENST00000480158 RNF217Q8TC41 542 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms