RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 GPX5O75715 221 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 SOX14O95416 240 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 RAB36O95755 333 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 AIFM1O95831 613 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 AGR2O95994 175 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 APOA1P02647 267 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 ALPPP05187 535 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 EIF2S1P05198 315 aaKnown RBP4.61□□□□□ -1.67
SF3B6-202ENST00000478050 THBDP07204 575 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 ACP5P13686 325 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 F3P13726 295 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 HIST1H1TP22492 207 aaPredicted RBP4.61□□□□□ -1.67
SF3B6-202ENST00000478050 MMP11P24347 488 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 ATP5A1P25705 553 aaKnown RBP4.61□□□□□ -1.67
SF3B6-202ENST00000478050 PSMA1P25786 263 aaKnown RBP4.61□□□□□ -1.67
SF3B6-202ENST00000478050 NDUFS1P28331 727 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 BCL6P41182 706 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 PCYT1AP49585 367 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 EIF2B2P49770 351 aaKnown RBP4.61□□□□□ -1.67
SF3B6-202ENST00000478050 SMSP52788 366 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 STXBP1P61764 594 aaKnown RBP4.61□□□□□ -1.67
SF3B6-202ENST00000478050 CDK5Q00535 292 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 TARDBPQ13148 414 aaKnown RBP eCLIP4.61□□□□□ -1.67
SF3B6-202ENST00000478050 SLAMF1Q13291 335 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 SGCGQ13326 291 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 DNASE1L3Q13609 305 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 GINS1Q14691 196 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 TRAM2Q15035 370 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 SPHARQ15513 63 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 CEBPEQ15744 281 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 SSX1Q16384 188 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 UAP1L1Q3KQV9 507 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 GPAT3Q53EU6 434 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 C3orf38Q5JPI3 329 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 SLC35F1Q5T1Q4 408 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 ATAD3BQ5T9A4 648 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 STEAP3Q658P3 488 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 TANGO2Q6ICL3 276 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 FAM180BQ6P0A1 224 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 SLC48A1Q6P1K1 146 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 ABHD17CQ6PCB6 329 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 PODNL1Q6PEZ8 512 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 VITQ6UXI7 678 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 SLC36A4Q6YBV0 504 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 ZNF793Q6ZN11 406 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 ADGRD2Q7Z7M1 963 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 MRGPREQ86SM8 312 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 IQCHQ86VS3 1027 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 NRROSQ86YC3 692 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 RBM45Q8IUH3 476 aaKnown RBP4.61□□□□□ -1.67
SF3B6-202ENST00000478050 SFTPA1Q8IWL2 248 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 UBALD2Q8IYN6 164 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 SAMD14Q8IZD0 417 aaPredicted RBP4.61□□□□□ -1.67
SF3B6-202ENST00000478050 CADM3Q8N126 398 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 SLC34A3Q8N130 599 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 CYP4Z2PQ8N1L4 340 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 PARP16Q8N5Y8 322 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 NANOGP1Q8N7R0 232 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 TCEANCQ8N8B7 351 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 AMER3Q8N944 861 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 ACOT4Q8N9L9 421 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 POC5Q8NA72 575 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 MORN4Q8NDC4 146 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 NUP43Q8NFH3 380 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 OR2L3Q8NG85 312 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 OR4K5Q8NGD3 323 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 OR52E1Q8NGJ3 308 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 OR5D16Q8NGK9 328 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 SETD6Q8TBK2 473 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 TEX47Q8TBZ9 253 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 SLC7A13Q8TCU3 470 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 MS4A6EQ96DS6 147 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 TXNDC15Q96J42 360 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 SLC38A2Q96QD8 506 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 IL4I1Q96RQ9 567 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 ARHGDIGQ99819 225 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 C17orf62Q9BQA9 187 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 AICDAQ9GZX7 198 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 BTBD1Q9H0C5 482 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 LMAN2LQ9H0V9 348 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 OSGEPL1Q9H4B0 414 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 KLHL31Q9H511 634 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 KIR3DX1Q9H7L2 352 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 CACYBPQ9HB71 228 aaKnown RBP4.61□□□□□ -1.67
SF3B6-202ENST00000478050 SMURF1Q9HCE7 757 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 HHATLQ9HCP6 504 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 SLC6A20Q9NP91 592 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 FGF20Q9NP95 211 aaPredicted RBP4.61□□□□□ -1.67
SF3B6-202ENST00000478050 EXOSC4Q9NPD3 245 aaKnown RBP4.61□□□□□ -1.67
SF3B6-202ENST00000478050 ISYNA1Q9NPH2 558 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 MBNL1Q9NR56 388 aaKnown RBP4.61□□□□□ -1.67
SF3B6-202ENST00000478050 MRPS18AQ9NVS2 196 aaKnown RBP4.61□□□□□ -1.67
SF3B6-202ENST00000478050 NDUFB11Q9NX14 153 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 KLHL28Q9NXS3 571 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 TAS2R16Q9NYV7 291 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 ITGB1BP2Q9UKP3 347 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 CES1P1Q9UKY3 287 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 SNX7Q9UNH6 387 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 SSR3Q9UNL2 185 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 DIMT1Q9UNQ2 313 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms